Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 6.6e-39 163.7 90 100.0
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 5.8e-27 124.0 92 71.7
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 2.7e-24 115.2 79 75.9
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 2.7e-24 115.2 99 64.6
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 6.0e-24 114.0 99 64.6
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 3.0e-23 111.7 90 64.4
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 3.9e-23 111.3 91 68.1
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 5.1e-23 110.9 90 64.4
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 6.6e-23 110.5 90 63.3
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 1.9e-22 109.0 90 65.6
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 2.5e-22 108.6 91 64.8
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 4.3e-22 107.8 91 68.1
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 5.6e-22 107.5 86 64.0
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 5.6e-22 107.5 90 62.2
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 9.5e-22 106.7 92 64.1
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 9.5e-22 106.7 91 63.7
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 1.6e-21 105.9 94 63.8
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.7e-21 104.4 90 61.1
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 6.2e-21 104.0 90 65.6
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 1.4e-20 102.8 97 60.8
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 2.4e-20 102.1 92 64.1
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 5.2e-20 100.9 92 63.0
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 1.5e-19 99.4 88 61.4
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 2.6e-19 98.6 90 64.4
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 3.4e-19 98.2 93 58.1
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 5.8e-19 97.4 88 61.4
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 9.9e-19 96.7 91 60.4
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 9.9e-19 96.7 95 58.9
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 1.3e-18 96.3 92 60.9
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 1.3e-18 96.3 88 61.4
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 1.7e-18 95.9 84 59.5
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.7e-18 95.9 91 60.4
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 2.2e-18 95.5 88 62.5
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 2.2e-18 95.5 88 62.5
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 3.8e-18 94.7 91 56.0
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 3.8e-18 94.7 88 58.0
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 4.9e-18 94.4 88 59.1
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.9e-18 94.4 91 59.3
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 6.4e-18 94.0 88 56.8
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 8.4e-18 93.6 91 59.3
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 1.1e-17 93.2 88 61.4
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.9e-17 92.4 82 59.8
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.9e-17 92.4 79 60.8
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.9e-17 92.4 82 59.8
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.9e-17 92.4 91 58.2
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.9e-17 92.4 91 58.2
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 5.4e-17 90.9 88 61.4
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 5.4e-17 90.9 91 60.4
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 7.1e-17 90.5 89 53.9
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 9.2e-17 90.1 77 58.4
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 2.7e-16 88.6 79 57.0
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 6.0e-16 87.4 91 57.1
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 7.8e-16 87.0 70 64.3
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 7.8e-16 87.0 96 56.2
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 7.8e-16 87.0 102 57.8
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 2.3e-15 85.5 91 56.0
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 3.9e-15 84.7 77 58.4
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 5.1e-15 84.3 90 52.2
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 8.7e-15 83.6 81 60.5
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 1.1e-14 83.2 91 52.7
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 1.9e-14 82.4 91 54.9
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 2.5e-14 82.0 94 53.2
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 2.5e-14 82.0 74 62.2
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 3.3e-14 81.6 91 59.3
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 5.6e-14 80.9 98 48.0
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 5.6e-14 80.9 78 55.1
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 7.3e-14 80.5 87 51.7
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 7.3e-14 80.5 85 57.6
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 9.6e-14 80.1 77 61.0
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 1.6e-13 79.3 93 48.4
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 2.8e-13 78.6 89 43.8
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 2.8e-13 78.6 89 43.8
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 2.8e-13 78.6 89 43.8
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 2.8e-13 78.6 89 43.8
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 2.8e-13 78.6 89 43.8
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 2.8e-13 78.6 87 50.6
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 4.7e-13 77.8 104 47.1
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 8.1e-13 77.0 78 59.0
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 3.1e-12 75.1 77 50.6
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 9.0e-12 73.6 96 43.8
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 2.0e-11 72.4 80 50.0
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 5.8e-11 70.9 75 49.3
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 7.6e-11 70.5 75 46.7
DCAR_009926 Daucus carota HOM05D007355 ORTHO05D009343 1.7e-10 69.3 84 56.0
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 4.9e-10 67.8 76 53.9
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 6.4e-10 67.4 75 46.7
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 1.4e-09 66.2 75 46.7
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 1.4e-09 66.2 75 52.0
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 1.4e-09 66.2 76 53.9
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 1.4e-09 66.2 76 53.9
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 1.4e-09 66.2 75 52.0
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 1.9e-09 65.9 76 51.3
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 2.4e-09 65.5 79 49.4
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 5.4e-09 64.3 80 48.8
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 7.1e-09 63.9 76 48.7
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 9.3e-09 63.5 77 50.6
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 1.6e-08 62.8 76 51.3
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 3.5e-08 61.6 76 51.3
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 3.5e-08 61.6 76 51.3
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 4.6e-08 61.2 77 44.2
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 6.0e-08 60.8 76 48.7
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 7.8e-08 60.5 76 48.7
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 1.0e-07 60.1 75 50.7
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 1.1e-06 56.6 73 49.3
ATR0627G001 Amborella trichopoda HOM05D007355 ORTHO05D009343 5.6e-06 54.3 75 41.3


User provided reference genes

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