Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 9.5e-209 729.9 371 100.0
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 6.7e-138 494.6 460 61.5
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 1.5e-121 440.3 376 65.2
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 3.7e-120 435.6 365 66.0
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 2.6e-113 412.9 369 62.9
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 4.8e-112 408.7 374 61.2
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 4.5e-110 402.1 386 59.6
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 8.5e-109 397.9 367 60.5
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 1.6e-107 393.7 367 59.4
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 6.1e-107 391.7 369 59.1
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.4e-106 390.6 367 59.9
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 6.8e-106 388.3 366 59.3
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 8.8e-106 387.9 370 58.6
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 4.4e-105 385.6 371 59.8
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 5.7e-105 385.2 371 59.8
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 2.8e-104 382.9 367 59.9
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 4.9e-104 382.1 369 58.0
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 4.9e-104 382.1 374 57.8
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 3.1e-103 379.4 363 56.5
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 3.1e-103 379.4 416 54.8
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 4.1e-103 379.0 367 58.0
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 5.4e-103 378.6 379 58.0
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 5.4e-103 378.6 370 58.9
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 1.3e-101 374.0 373 55.8
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 1.7e-101 373.6 377 56.0
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 1.7e-101 373.6 379 55.9
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 5.0e-101 372.1 369 57.7
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 3.3e-100 369.4 469 51.6
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 4.3e-100 369.0 372 56.2
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 7.3e-100 368.2 368 56.8
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 2.1e-99 366.7 367 56.9
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 2.8e-99 366.3 385 55.6
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 8.9e-98 361.3 364 56.9
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 1.7e-96 357.1 365 53.7
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 2.2e-96 356.7 370 55.9
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 3.7e-96 355.9 380 53.9
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 4.9e-96 355.5 383 55.1
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 1.1e-95 354.4 372 54.3
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 2.4e-95 353.2 375 55.7
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 2.7e-94 349.7 368 54.6
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 5.9e-94 348.6 369 55.0
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 1.3e-93 347.4 365 52.6
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 1.3e-93 347.4 369 52.8
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 1.7e-93 347.1 389 52.2
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 2.3e-93 346.7 373 56.0
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 8.6e-93 344.7 373 51.2
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 1.1e-92 344.4 362 54.7
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 1.9e-92 343.6 404 49.8
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 1.9e-92 343.6 366 54.1
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 2.8e-91 339.7 401 51.6
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 1.5e-89 334.0 374 55.1
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 2.6e-89 333.2 374 51.9
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 7.5e-89 331.6 273 62.3
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 3.7e-88 329.3 366 52.7
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 6.4e-88 328.6 371 53.1
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 2.7e-86 323.2 374 51.3
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 2.7e-86 323.2 372 50.8
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 4.6e-86 322.4 366 50.8
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 1.3e-85 320.9 378 52.1
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 2.3e-85 320.1 378 51.1
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 6.6e-85 318.5 286 64.0
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 1.5e-84 317.4 378 50.0
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 1.2e-83 314.3 398 48.2
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 4.7e-83 312.4 276 60.9
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 6.2e-83 312.0 371 49.1
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 8.1e-83 311.6 372 49.5
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 8.1e-83 311.6 371 49.6
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 1.1e-82 311.2 381 48.0
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 3.1e-82 309.7 370 49.7
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 6.8e-82 308.5 273 59.7
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 8.9e-82 308.1 373 49.6
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 1.5e-81 307.4 374 49.5
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 2.2e-80 303.5 373 49.3
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 2.2e-80 303.5 237 65.0
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 3.2e-79 299.7 374 49.2
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 3.5e-78 296.2 270 61.5
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 8.1e-75 285.0 367 49.0
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 1.2e-73 281.2 230 65.2
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 1.5e-73 280.8 374 47.9
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 1.2e-70 271.2 240 58.3
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 1.2e-70 271.2 335 49.6
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 1.5e-68 264.2 314 50.0
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 9.6e-68 261.5 281 53.0
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 4.7e-67 259.2 292 50.0
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 1.4e-66 257.7 383 44.1
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 4.0e-66 256.1 314 47.8
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 8.9e-66 255.0 373 42.9
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 2.9e-64 250.0 416 41.1
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 1.4e-63 247.7 346 44.2
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 1.9e-63 247.3 285 49.8
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 1.4e-58 231.1 237 53.6
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 1.4e-58 231.1 150 75.3
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 8.4e-56 221.9 395 41.5
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 3.2e-55 219.9 278 48.6
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 1.2e-54 218.0 392 38.0
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 7.9e-54 215.3 270 47.4
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 1.8e-53 214.2 274 47.8
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 3.9e-53 213.0 248 48.8
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 8.7e-53 211.8 258 51.2
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 9.6e-52 208.4 233 51.1
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 2.8e-51 206.8 230 52.2
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 8.4e-48 195.3 344 36.3
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 4.3e-44 183.0 234 47.9
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 9.0e-42 175.3 379 35.9
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 2.7e-38 163.7 298 40.6
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 6.0e-38 162.5 389 30.8
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 3.0e-37 160.2 151 58.9
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 6.7e-37 159.1 226 45.6
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 4.8e-35 152.9 371 33.7
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 2.3e-29 134.0 147 53.7
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 2.3e-29 134.0 147 53.7
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 8.2e-27 125.6 207 42.5
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 1.4e-26 124.8 199 42.2
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 7.7e-25 119.0 273 33.0
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 5.0e-24 116.3 187 42.2
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 3.3e-20 103.6 97 54.6
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 5.7e-20 102.8 93 60.2
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 8.2e-19 99.0 63 74.6
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 6.9e-18 95.9 65 75.4
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 2.9e-16 90.5 231 30.7
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 3.7e-11 73.6 63 60.3
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 3.7e-11 73.6 92 45.7
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 4.5e-09 66.6 72 51.4
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 1.0e-08 65.5 92 40.2
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 1.0e-08 65.5 92 40.2
BcaC04g19543 Brassica carinata HOM05D006712 ORTHO05D008219 5.5e-07 59.7 39 66.7


User provided reference genes

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