Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013124 Camellia sinensis var. sinensis HOM05D007148 ORTHO05D009047 7.0e-145 517.3 267 100.0
Actinidia31326 Actinidia chinensis HOM05D007148 ORTHO05D009047 2.5e-49 199.9 249 52.2
Rhsim04G0144100 Rhododendron simsii HOM05D007148 ORTHO05D009047 2.7e-48 196.4 246 51.6
Dinv35791 Davidia involucrata HOM05D007148 ORTHO05D009047 8.5e-42 174.9 238 46.6
GSVIVG01033649001 Vitis vinifera HOM05D007148 ORTHO05D009047 1.1e-36 157.9 233 44.6
Rhsim04G0143400 Rhododendron simsii HOM05D007148 ORTHO05D009047 1.0e-34 151.4 148 58.8
Nitab4.5_0008624g0020 Nicotiana tabacum HOM05D007148 ORTHO05D009047 6.3e-29 132.1 245 38.8
Oeu053686.1 Olea europaea HOM05D007148 ORTHO05D009047 1.8e-28 130.6 232 41.8
vmacro08783 Vaccinium macrocarpon HOM05D007148 ORTHO05D009047 2.2e-26 123.6 136 57.4
TAR633G2546 Trochodendron aralioides HOM05D007148 ORTHO05D009047 2.3e-23 113.6 244 38.5
Sopen09g003080 Solanum pennellii HOM05D007148 ORTHO05D009047 5.2e-23 112.5 241 36.9
Cc06_g04310 Coffea canephora HOM05D007148 ORTHO05D009047 8.8e-23 111.7 240 35.4
PGSC0003DMG401003864 Solanum tuberosum HOM05D007148 ORTHO05D009047 1.5e-22 110.9 247 35.6
Solyc09g008260.3 Solanum lycopersicum HOM05D007148 ORTHO05D009047 7.5e-22 108.6 242 38.4
CAN.G900.26 Capsicum annuum HOM05D007148 ORTHO05D009047 2.2e-21 107.1 246 37.0
Nitab4.5_0000578g0130 Nicotiana tabacum HOM05D007148 ORTHO05D009047 2.8e-21 106.7 258 36.0
Duzib128G0502 Durio zibethinus HOM05D007148 ORTHO05D009047 3.7e-21 106.3 301 34.6
ECA233G5868 Erigeron canadensis HOM05D007148 ORTHO05D009047 1.1e-20 104.8 238 36.1
MSTRG.10326 Avicennia marina HOM05D007148 ORTHO05D009047 3.1e-20 103.2 258 36.0
SalBow3G0477 Salvia bowleyana HOM05D007148 ORTHO05D009047 4.1e-20 102.8 248 34.7
HanXRQChr13g0400991 Helianthus annuus HOM05D007148 ORTHO05D009047 7.0e-20 102.1 244 37.7
Nn6g35277 Nelumbo nucifera HOM05D007148 ORTHO05D009047 1.2e-19 101.3 246 35.8
Prupe.7G128700 Prunus persica HOM05D007148 ORTHO05D009047 5.9e-19 99.0 358 30.2
Hma1.2p1_2076F.1_g313310 Hydrangea macrophylla HOM05D007148 ORTHO05D009047 7.2e-17 92.0 145 42.8
CiPaw.09G171600 Carya illinoinensis HOM05D007148 ORTHO05D009047 1.6e-16 90.9 374 27.8
COL.COLO4_26948 Corchorus olitorius HOM05D007148 ORTHO05D009047 1.4e-15 87.8 281 32.4
Phvul.007G147800 Phaseolus vulgaris HOM05D007148 ORTHO05D009047 2.3e-15 87.0 235 32.3
QL07p043079 Quercus lobata HOM05D007148 ORTHO05D009047 2.3e-15 87.0 159 38.4
DCAR_014515 Daucus carota HOM05D007148 ORTHO05D009047 3.0e-15 86.7 243 35.0
Thecc.05G068300 Theobroma cacao HOM05D007148 ORTHO05D009047 3.0e-15 86.7 279 31.2
CsaV3_6G039960 Cucumis sativus L. HOM05D007148 ORTHO05D009047 6.8e-15 85.5 194 33.5
Gohir.A01G213200 Gossypium hirsutum HOM05D007148 ORTHO05D009047 6.8e-15 85.5 290 32.4
Ca_11512_v3 Cicer arietinum L. HOM05D000261 ORTHO05D009047 5.7e-14 82.4 198 37.9
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 5.7e-14 82.4 154 38.3
Gorai.002G246600 Gossypium raimondii HOM05D007148 ORTHO05D009047 1.3e-13 81.3 295 30.8
vmacro08784 Vaccinium macrocarpon HOM05D007148 ORTHO05D009047 1.3e-13 81.3 231 34.6
Sc20g0005580 Simmondsia chinensis HOM05D007148 ORTHO05D009047 2.8e-13 80.1 236 31.8
Atru.chr8.1789 Acer truncatum HOM05D007148 ORTHO05D009047 4.8e-13 79.3 165 37.6
Sabra06G0097500 Salix brachista HOM05D001037 ORTHO05D000888 4.8e-13 79.3 180 35.6
AUR62042066 Chenopodium quinoa HOM05D007148 ORTHO05D009047 6.3e-13 79.0 233 32.2
Duzib093G0361 Durio zibethinus HOM05D007148 ORTHO05D009047 1.1e-12 78.2 300 30.3
MELO3C024473.2 Cucumis melo HOM05D007148 ORTHO05D009047 1.4e-12 77.8 205 31.7
Potri.006G123300 Populus trichocarpa HOM05D007148 ORTHO05D009047 1.4e-12 77.8 179 34.6
Hund20337 Selenicereus undatus HOM05D007148 ORTHO05D009047 1.4e-12 77.8 307 31.9
Gohir.D01G204200 Gossypium hirsutum HOM05D007148 ORTHO05D009047 5.4e-12 75.9 300 32.0
Lsat_1_v5_gn_6_24961 Lactuca sativa HOM05D007148 ORTHO05D009047 7.0e-12 75.5 239 31.0
MBI19_g45279_MAGBIO Magnolia biondii HOM05D007148 ORTHO05D009047 1.2e-11 74.7 259 31.7
MD12G1110100 Malus domestica HOM05D007148 ORTHO05D009047 2.7e-11 73.6 173 35.8
Aqoxy2G01740 Aquilegia oxysepala HOM05D007148 ORTHO05D009047 4.5e-11 72.8 230 30.4
Glyma.10G054600 Glycine max HOM05D007148 ORTHO05D009047 7.7e-11 72.0 204 34.3
Migut.J00650 Erythranthe guttata HOM05D007148 ORTHO05D009047 1.3e-10 71.2 226 31.9
Ciclev10012080m.g Citrus clementina HOM05D007148 ORTHO05D009047 3.8e-10 69.7 165 35.2
Thhalv10013433m.g Eutrema salsugineum HOM05D007148 ORTHO05D009047 8.5e-10 68.6 243 31.3
Lalb_Chr02g0155781 Lupinus albus HOM05D007148 ORTHO05D009047 8.5e-10 68.6 192 28.6
MD04G1092300 Malus domestica HOM05D007148 ORTHO05D009047 1.1e-09 68.2 172 34.9
Cpa.g.sc102.25 Carica papaya HOM05D007148 ORTHO05D009047 1.9e-09 67.4 182 33.0
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 2.5e-09 67.0 260 28.8
arahy.Tifrunner.gnm1.ann1.IRYX6E Arachis hypogaea HOM05D007148 ORTHO05D009047 3.2e-09 66.6 201 33.8
arahy.Tifrunner.gnm1.ann1.J3RTVJ Arachis hypogaea HOM05D007148 ORTHO05D009047 3.2e-09 66.6 201 33.8
Peaxi162Scf00847g00313 Petunia axillaris HOM05D007148 ORTHO05D009047 4.2e-09 66.2 317 27.8
AL6G12750 Arabidopsis lyrata HOM05D007148 ORTHO05D009047 5.5e-09 65.9 170 34.1
CANSAT80G2677 Cannabis sativa HOM05D007148 ORTHO05D009047 5.5e-09 65.9 181 32.0
FAN14G3336 Fragaria x ananassa HOM05D007148 ORTHO05D009047 3.6e-08 63.2 191 29.3
Ah.08g211560 Amaranthus hybridus HOM05D007148 ORTHO05D009047 6.1e-08 62.4 242 29.8
ATR1126G054 Amborella trichopoda HOM05D007148 ORTHO05D009047 6.1e-08 62.4 269 30.5
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 6.1e-08 62.4 84 44.0
AUR62026914 Chenopodium quinoa HOM05D007148 ORTHO05D009047 8.0e-08 62.0 231 28.6
FvH4_6g16490 Fragaria vesca HOM05D007148 ORTHO05D009047 1.0e-07 61.6 191 29.3
Psat6g073400 Pisum sativum HOM05D007148 ORTHO05D009047 1.8e-07 60.8 232 28.4
Eucgr.A01669 Eucalyptus grandis HOM05D007148 ORTHO05D009047 2.3e-07 60.5 331 26.3
Sed0015836 Sechium edule HOM05D007148 ORTHO05D009047 2.3e-07 60.5 180 32.2
Aa31LG1G21730 Aethionema arabicum HOM05D007148 ORTHO05D009047 8.8e-07 58.5 211 28.4
ClCG04G009380 Citrullus lanatus HOM05D007148 ORTHO05D009047 8.8e-07 58.5 188 30.3
Manes.08G011400 Manihot esculenta HOM05D007148 ORTHO05D009047 1.2e-06 58.2 208 30.3
Medtr1g063080 Medicago truncatula HOM05D007148 ORTHO05D009047 2.6e-06 57.0 203 30.0
FAN09G1323 Fragaria x ananassa HOM05D007148 ORTHO05D009047 3.4e-06 56.6 189 29.1
Lj5g0011331 Lotus japonicus HOM05D007148 ORTHO05D009047 3.4e-06 56.6 170 31.8
Glyma.13G141800 Glycine max HOM05D007148 ORTHO05D009047 4.4e-06 56.2 188 31.9
VMungo0720G1794 Vigna mungo HOM05D007148 ORTHO05D009047 4.4e-06 56.2 188 29.8
FAN05G4699 Fragaria x ananassa HOM05D007148 ORTHO05D009047 5.7e-06 55.8 201 28.9
FAN05G5619 Fragaria x ananassa HOM05D007148 ORTHO05D009047 5.7e-06 55.8 201 28.9
TWI74G0491 Tripterygium wilfordii HOM05D007148 ORTHO05D009047 5.7e-06 55.8 224 26.8


User provided reference genes

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