Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013098 Camellia sinensis var. sinensis HOM05D000803 ORTHO05D007008 3.1e-65 251.9 153 100.0
CSS0028056 Camellia sinensis var. sinensis HOM05D000803 ORTHO05D007008 1.6e-29 133.3 179 53.6
Dinv41069 Davidia involucrata HOM05D000803 ORTHO05D007008 6.2e-29 131.3 179 50.3
Actinidia17785 Actinidia chinensis HOM05D000803 ORTHO05D007008 2.3e-28 129.4 179 49.2
Dinv25877 Davidia involucrata HOM05D000803 ORTHO05D007008 1.5e-27 126.7 179 48.0
Hma1.2p1_0105F.1_g050550 Hydrangea macrophylla HOM05D000803 ORTHO05D007008 8.3e-26 120.9 179 46.4
GSVIVG01034548001 Vitis vinifera HOM05D000803 ORTHO05D007008 9.2e-25 117.5 179 46.9
Cfa018313 Carpinus fangiana HOM05D000803 ORTHO05D007008 2.0e-24 116.3 179 44.7
vmacro12407 Vaccinium macrocarpon HOM05D000803 ORTHO05D007008 4.6e-24 115.2 178 46.6
Haze_17764 Corylus avellana HOM05D000803 ORTHO05D007008 6.0e-24 114.8 193 42.5
Thecc.08G154400 Theobroma cacao HOM05D000803 ORTHO05D007008 8.6e-23 110.9 183 45.4
Prupe.8G033500 Prunus persica HOM05D000803 ORTHO05D007008 1.9e-22 109.8 179 45.3
RcHm_v2.0_Chr6g0275081 Rosa chinensis HOM05D000803 ORTHO05D007008 3.3e-22 109.0 179 44.1
Actinidia10643 Actinidia chinensis HOM05D000803 ORTHO05D007008 7.3e-22 107.8 161 47.2
FvH4_2g13460 Fragaria vesca HOM05D000803 ORTHO05D007008 8.1e-21 104.4 134 50.0
FAN24G3234 Fragaria x ananassa HOM05D000803 ORTHO05D007008 8.1e-21 104.4 134 50.0
FAN27G3502 Fragaria x ananassa HOM05D000803 ORTHO05D007008 1.8e-20 103.2 134 49.3
CiPaw.16G011100 Carya illinoinensis HOM05D000803 ORTHO05D007008 3.1e-20 102.4 179 40.2
Cc10_g14920 Coffea canephora HOM05D000803 ORTHO05D007008 4.0e-20 102.1 138 49.3
Potri.005G193400 Populus trichocarpa HOM05D000803 ORTHO05D007008 4.0e-20 102.1 180 42.2
CiPaw.15G015200 Carya illinoinensis HOM05D000803 ORTHO05D007008 1.2e-19 100.5 181 42.0
ClCG08G002220 Citrullus lanatus HOM05D000803 ORTHO05D007008 2.0e-19 99.8 134 47.0
Glyma.10G224100 Glycine max HOM05D000803 ORTHO05D007008 2.6e-19 99.4 180 41.1
Sed0014094 Sechium edule HOM05D000803 ORTHO05D007008 2.6e-19 99.4 134 46.3
TWI32G0734 Tripterygium wilfordii HOM05D000803 ORTHO05D007008 2.6e-19 99.4 181 44.2
MELO3C025023.2 Cucumis melo HOM05D000803 ORTHO05D007008 3.4e-19 99.0 134 47.0
FAN15G1904 Fragaria x ananassa HOM05D000803 ORTHO05D007008 3.4e-19 99.0 179 48.0
Cpa.g.sc1027.2 Carica papaya HOM05D000803 ORTHO05D007008 5.8e-19 98.2 179 40.2
CARHR070300 Cardamine hirsuta HOM05D000803 ORTHO05D007008 9.8e-19 97.4 177 39.5
Medtr1g098660 Medicago truncatula HOM05D000803 ORTHO05D007008 9.8e-19 97.4 135 45.2
TWI60G0648 Tripterygium wilfordii HOM05D000803 ORTHO05D007008 1.7e-18 96.7 181 44.2
AT1G76760 Arabidopsis thaliana HOM05D000803 ORTHO05D007008 3.7e-18 95.5 177 39.5
Ciclev10002691m.g Citrus clementina HOM05D000803 ORTHO05D007008 3.7e-18 95.5 179 40.8
Manes.18G093000 Manihot esculenta HOM05D000803 ORTHO05D007008 3.7e-18 95.5 138 45.7
Sp5g31910 Schrenkiella parvula HOM05D000803 ORTHO05D007008 3.7e-18 95.5 177 39.5
Lalb_Chr02g0141441 Lupinus albus HOM05D000803 ORTHO05D007008 4.9e-18 95.1 123 48.0
MD05G1027800 Malus domestica HOM05D000803 ORTHO05D007008 6.4e-18 94.7 179 44.7
Atru.chr13.2085 Acer truncatum HOM05D000803 ORTHO05D007008 8.3e-18 94.4 184 41.8
A07p42400 Brassica napus HOM05D000803 ORTHO05D007008 8.3e-18 94.4 137 43.8
C06p50970 Brassica napus HOM05D000803 ORTHO05D007008 8.3e-18 94.4 177 39.0
BolC6t40121H Brassica oleracea HOM05D000803 ORTHO05D007008 8.3e-18 94.4 177 39.0
CANSAT25G2976 Cannabis sativa HOM05D000803 ORTHO05D007008 8.3e-18 94.4 179 39.7
Manes.02G180500 Manihot esculenta HOM05D000803 ORTHO05D007008 8.3e-18 94.4 134 44.8
AL2G36910 Arabidopsis lyrata HOM05D000803 ORTHO05D007008 1.1e-17 94.0 134 43.3
Thhalv10019218m.g Eutrema salsugineum HOM05D000803 ORTHO05D007008 1.9e-17 93.2 176 39.2
Solyc04g071560.4 Solanum lycopersicum HOM05D000803 ORTHO05D007008 1.9e-17 93.2 138 42.8
BraA07t31766Z Brassica rapa HOM05D000803 ORTHO05D007008 2.4e-17 92.8 137 43.1
Phvul.007G080600 Phaseolus vulgaris HOM05D000803 ORTHO05D007008 3.2e-17 92.4 175 40.0
Potri.002G066800 Populus trichocarpa HOM05D000803 ORTHO05D007008 3.2e-17 92.4 180 39.4
PGSC0003DMG400024095 Solanum tuberosum HOM05D000803 ORTHO05D007008 4.1e-17 92.0 179 38.5
Sopen04g027540 Solanum pennellii HOM05D000803 ORTHO05D007008 5.4e-17 91.7 179 37.4
TPR.G17024 Trifolium pratense HOM05D000803 ORTHO05D007008 5.4e-17 91.7 123 47.2
Glyma.20G167700 Glycine max HOM05D000803 ORTHO05D007008 7.1e-17 91.3 177 41.2
Ca_10681_v3 Cicer arietinum L. HOM05D000803 ORTHO05D007008 9.2e-17 90.9 131 43.5
Duzib116G0573 Durio zibethinus HOM05D000803 ORTHO05D007008 9.2e-17 90.9 180 40.6
Rhsim06G0091500 Rhododendron simsii HOM05D000803 ORTHO05D007008 9.2e-17 90.9 172 40.7
arahy.Tifrunner.gnm1.ann1.8B02PA Arachis hypogaea HOM05D000803 ORTHO05D007008 1.2e-16 90.5 180 48.3
Psat1g027360 Pisum sativum HOM05D000803 ORTHO05D007008 1.2e-16 90.5 182 41.2
CAN.G1215.9 Capsicum annuum HOM05D000803 ORTHO05D007008 1.6e-16 90.1 138 43.5
Nn1g06068 Nelumbo nucifera HOM05D000803 ORTHO05D007008 1.6e-16 90.1 134 45.5
Carub.0002s2367 Capsella rubella HOM05D000803 ORTHO05D007008 2.1e-16 89.7 177 36.7
Sp1g32430 Schrenkiella parvula HOM05D000803 ORTHO05D007008 2.1e-16 89.7 134 42.5
CARHR035380 Cardamine hirsuta HOM05D000803 ORTHO05D007008 3.5e-16 89.0 134 41.0
THA.LOC104809204 Tarenaya hassleriana HOM05D000803 ORTHO05D007008 3.5e-16 89.0 138 42.0
Aa31LG4G6830 Aethionema arabicum HOM05D000803 ORTHO05D007008 6.0e-16 88.2 172 37.8
VMungo0720G0237 Vigna mungo HOM05D000803 ORTHO05D007008 6.0e-16 88.2 180 41.1
MD10G1028500 Malus domestica HOM05D000803 ORTHO05D007008 7.8e-16 87.8 177 41.2
Nitab4.5_0002497g0030 Nicotiana tabacum HOM05D000803 ORTHO05D007008 1.0e-15 87.4 183 38.3
BcaB07g33985 Brassica carinata HOM05D000803 ORTHO05D007008 1.3e-15 87.0 134 41.8
Gohir.D05G245100 Gossypium hirsutum HOM05D000803 ORTHO05D007008 1.3e-15 87.0 182 41.2
Gohir.A05G244100 Gossypium hirsutum HOM05D000803 ORTHO05D007008 1.7e-15 86.7 182 40.7
AL1G51610 Arabidopsis lyrata HOM05D000803 ORTHO05D007008 2.3e-15 86.3 122 44.3
Peaxi162Scf00599g00122 Petunia axillaris HOM05D000803 ORTHO05D007008 2.3e-15 86.3 181 38.1
COL.COLO4_29854 Corchorus olitorius HOM05D000803 ORTHO05D007008 3.0e-15 85.9 181 41.4
arahy.Tifrunner.gnm1.ann1.12I364 Arachis hypogaea HOM05D000803 ORTHO05D007008 6.6e-15 84.7 179 47.5
Gorai.009G254900 Gossypium raimondii HOM05D000803 ORTHO05D007008 6.6e-15 84.7 188 39.9
Lj4A698T61 Lonicera japonica HOM05D000803 ORTHO05D007008 6.6e-15 84.7 162 43.8
Nitab4.5_0001187g0140 Nicotiana tabacum HOM05D000803 ORTHO05D007008 8.6e-15 84.3 138 41.3
Thhalv10005020m.g Eutrema salsugineum HOM05D000803 ORTHO05D007008 1.1e-14 84.0 134 40.3
C06p00210 Brassica napus HOM05D000803 ORTHO05D007008 1.5e-14 83.6 134 41.0
PGR044G2288 Punica granatum HOM05D000803 ORTHO05D007008 1.5e-14 83.6 132 40.9
PGR100G0008 Punica granatum HOM05D000803 ORTHO05D007008 1.5e-14 83.6 132 40.9
Aqoxy5G00856 Aquilegia oxysepala HOM05D000803 ORTHO05D007008 1.9e-14 83.2 180 38.9
THA.LOC104812033 Tarenaya hassleriana HOM05D000803 ORTHO05D007008 1.9e-14 83.2 182 37.9
Carub.0001s3456 Capsella rubella HOM05D000803 ORTHO05D007008 2.5e-14 82.8 134 40.3
Oeu023261.1 Olea europaea HOM05D000803 ORTHO05D007008 3.3e-14 82.4 139 41.0
Oeu023262.1 Olea europaea HOM05D000803 ORTHO05D007008 3.3e-14 82.4 139 41.0
Lsat_1_v5_gn_9_41160 Lactuca sativa HOM05D000803 ORTHO05D007008 5.6e-14 81.6 133 41.4
PSO541G3025 Papaver somniferum HOM05D000803 ORTHO05D007008 5.6e-14 81.6 124 41.9
AT1G43560 Arabidopsis thaliana HOM05D000803 ORTHO05D007008 2.1e-13 79.7 118 44.1
EL10Ac1g01567 Beta vulgaris HOM05D000803 ORTHO05D007008 2.8e-13 79.3 133 40.6
BcaC08g42810 Brassica carinata HOM05D000803 ORTHO05D007008 2.8e-13 79.3 111 43.2
PSO675G7586 Papaver somniferum HOM05D000803 ORTHO05D007008 2.8e-13 79.3 176 36.9
HPP92_004410 Vanilla planifolia HOM05D000803 ORTHO05D007008 8.1e-13 77.8 135 40.0
MBI09_g13284_MAGBIO Magnolia biondii HOM05D000803 ORTHO05D007008 1.4e-12 77.0 177 36.2
SalBow7G1797 Salvia bowleyana HOM05D000803 ORTHO05D007008 1.4e-12 77.0 139 37.4
SalBow7G3643 Salvia bowleyana HOM05D000803 ORTHO05D007008 1.4e-12 77.0 139 37.4
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 1.8e-12 76.6 134 38.8
Hund17447 Selenicereus undatus HOM05D000803 ORTHO05D007008 1.8e-12 76.6 179 34.1
Sabra02G0053100 Salix brachista HOM05D000803 ORTHO05D007008 2.3e-12 76.3 111 42.3
ECA232G0506 Erigeron canadensis HOM05D000803 ORTHO05D007008 4.0e-12 75.5 109 42.2
PSO734G0001 Papaver somniferum HOM05D000803 ORTHO05D007008 8.9e-12 74.3 107 41.1
Sabra05G0147800 Salix brachista HOM05D000803 ORTHO05D007008 8.9e-12 74.3 168 35.7
DCAR_010094 Daucus carota HOM05D000803 ORTHO05D007008 2.0e-11 73.2 138 36.2
HanXRQChr11g0320301 Helianthus annuus HOM05D000803 ORTHO05D007008 2.0e-11 73.2 116 43.1
unitig_749.g13915 Utricularia gibba HOM05D000803 ORTHO05D007008 2.0e-11 73.2 129 40.3
MSTRG.25310 Avicennia marina HOM05D000803 ORTHO05D007008 3.4e-11 72.4 134 39.6
CDE06G0325 Ceratophyllum demersum HOM05D000803 ORTHO05D007008 9.9e-11 70.9 122 41.8
CDE08G1588 Ceratophyllum demersum HOM05D000803 ORTHO05D007008 1.7e-10 70.1 108 43.5
AUR62040603 Chenopodium quinoa HOM05D000803 ORTHO05D007008 2.9e-10 69.3 49 67.3
Os01g0963400 Oryza sativa ssp. japonica HOM05D000803 ORTHO05D007008 2.9e-10 69.3 111 41.4
MSTRG.24215 Avicennia marina HOM05D000803 ORTHO05D007008 6.4e-10 68.2 49 61.2
Lj5g0019278 Lotus japonicus HOM05D000803 ORTHO05D007008 6.4e-10 68.2 101 43.6
Sc20g0003590 Simmondsia chinensis HOM05D000803 ORTHO05D007008 1.9e-09 66.6 168 35.7
Zm00001eb140270 Zea mays HOM05D000803 ORTHO05D007008 1.9e-09 66.6 111 40.5
QL02p038779 Quercus lobata HOM05D000803 ORTHO05D007008 4.1e-09 65.5 91 46.2
SEGI_08164 Sequoiadendron giganteum HOM05D000803 ORTHO05D007008 4.1e-09 65.5 49 57.1
Migut.C00985 Erythranthe guttata HOM05D000803 ORTHO05D007008 9.2e-09 64.3 133 36.1
Eucgr.F04229 Eucalyptus grandis HOM05D000803 ORTHO05D007008 1.2e-08 63.9 165 33.3
TAR381G0004 Trochodendron aralioides HOM05D000803 ORTHO05D007008 1.2e-08 63.9 118 42.4
Migut.N03209 Erythranthe guttata HOM05D000803 ORTHO05D007008 1.6e-08 63.5 133 35.3
SGA_v2.0_scaffold24G10301 Striga asiatica HOM05D000803 ORTHO05D007008 2.7e-08 62.8 110 37.3
Oeu046045.2 Olea europaea HOM05D000803 ORTHO05D007008 3.5e-08 62.4 168 31.5
Nn5g28767 Nelumbo nucifera HOM05D000803 ORTHO05D007008 1.7e-07 60.1 157 33.1
AagrBONN_evm.TU.Sc2ySwM_117.3352 Anthoceros agrestis HOM05D000803 ORTHO05D007008 5.1e-07 58.5 113 31.0
SalBow6G5324 Salvia bowleyana HOM05D000803 ORTHO05D007008 7.3e-06 54.7 90 41.1
Lj3g0020009 Lotus japonicus HOM05D000803 ORTHO05D007008 9.6e-06 54.3 87 40.2


User provided reference genes

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