Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.9e-114 414.5 207 100.0
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.4e-105 386.3 207 94.2
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-100 370.2 211 91.0
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.0e-100 367.1 211 90.5
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.5e-99 366.3 211 90.5
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-97 360.1 213 90.1
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-89 333.6 212 84.9
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.8e-87 323.9 194 88.7
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 8.8e-87 323.9 211 76.8
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 8.8e-87 323.9 211 76.8
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.0e-82 310.5 208 80.3
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 5.7e-78 294.7 203 72.9
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 1.8e-71 273.1 202 69.8
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 3.9e-71 271.9 207 67.1
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 1.5e-70 270.0 212 62.3
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 5.7e-70 268.1 202 68.3
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 6.3e-69 264.6 212 64.6
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 5.3e-68 261.5 211 62.1
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 1.2e-67 260.4 207 65.2
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 1.6e-67 260.0 204 65.7
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 2.6e-67 259.2 211 61.1
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 1.3e-66 256.9 203 67.5
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 3.8e-66 255.4 211 60.2
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 5.0e-66 255.0 211 62.6
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 2.5e-65 252.7 202 63.4
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 1.6e-64 250.0 211 59.2
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 2.7e-64 249.2 211 63.5
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 4.7e-64 248.4 201 62.7
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 4.7e-64 248.4 203 65.0
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 8.0e-64 247.7 201 65.2
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 1.0e-63 247.3 215 64.7
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 8.8e-63 244.2 211 61.6
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 1.2e-62 243.8 212 63.2
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 4.4e-62 241.9 202 61.4
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 4.4e-62 241.9 200 62.5
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 4.4e-62 241.9 200 64.0
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 1.3e-61 240.4 216 60.2
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.2e-61 239.6 202 60.9
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 2.2e-61 239.6 217 59.0
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 3.7e-61 238.8 202 63.4
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 3.7e-61 238.8 211 59.7
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 4.8e-61 238.4 200 62.0
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 1.1e-60 237.3 210 61.0
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 1.8e-60 236.5 202 62.4
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 2.4e-60 236.1 211 63.0
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 3.1e-60 235.7 217 57.6
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 3.1e-60 235.7 202 60.4
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 4.1e-60 235.3 216 61.6
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 4.1e-60 235.3 200 61.5
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 5.3e-60 235.0 212 57.1
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 7.0e-60 234.6 211 60.2
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 9.1e-60 234.2 216 60.6
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.6e-59 233.4 217 60.8
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 2.0e-59 233.0 217 56.2
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 1.7e-58 229.9 217 56.2
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 1.7e-58 229.9 217 56.2
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 6.5e-58 228.0 202 58.9
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.9e-57 226.5 215 63.7
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 5.2e-55 218.4 217 54.8
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 5.2e-55 218.4 217 54.8
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 5.2e-55 218.4 202 58.9
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 6.8e-55 218.0 204 59.3
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 8.8e-55 217.6 207 60.9
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 1.5e-54 216.9 200 54.5
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 2.6e-54 216.1 204 59.3
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 7.5e-54 214.5 217 53.5
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 2.2e-53 213.0 204 58.8
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 8.3e-53 211.1 209 58.9
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 1.4e-52 210.3 205 56.6
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 3.1e-52 209.1 218 55.0
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 7.0e-52 208.0 208 56.2
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 3.8e-50 202.2 210 54.8
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 5.0e-50 201.8 201 53.2
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 7.2e-49 198.0 208 51.9
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 7.2e-49 198.0 212 55.7
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 2.8e-48 196.1 207 56.0
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 4.7e-48 195.3 207 51.2
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 1.4e-47 193.7 212 50.9
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 3.0e-47 192.6 223 50.7
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 5.2e-47 191.8 208 50.5
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 8.9e-47 191.0 218 48.6
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 2.6e-46 189.5 209 52.2
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 9.8e-46 187.6 206 51.9
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 1.8e-44 183.3 213 47.9
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 9.2e-44 181.0 208 48.6
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 3.5e-43 179.1 211 49.3
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 3.5e-43 179.1 212 50.9
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 5.9e-43 178.3 214 50.5
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 2.3e-42 176.4 210 52.9
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 5.0e-42 175.3 209 51.2
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 5.0e-42 175.3 209 51.2
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 2.5e-41 172.9 209 50.2
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 2.5e-41 172.9 209 50.2
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 7.3e-41 171.4 214 48.1
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 7.3e-41 171.4 209 49.8
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 2.1e-40 169.9 215 47.9
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 2.8e-40 169.5 214 46.7
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 6.1e-40 168.3 208 51.0
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 1.0e-39 167.5 172 56.4
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 2.3e-39 166.4 214 47.2
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 2.3e-39 166.4 225 44.9
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 6.8e-39 164.9 212 48.1
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 2.0e-38 163.3 225 45.3
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 2.6e-30 136.3 105 66.7
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 4.9e-29 132.1 90 76.7
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 1.9e-28 130.2 198 38.4
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 4.1e-28 129.0 215 37.2
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 9.5e-25 117.9 206 33.5
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 7.5e-22 108.2 197 39.1
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 1.9e-17 93.6 178 36.0
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 2.5e-17 93.2 208 36.1
QL93p0107_0059 Quercus lobata HOM05D006038 ORTHO05D007547 5.6e-09 65.5 56 58.9


User provided reference genes

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