Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013058 Camellia sinensis var. sinensis HOM05D002691 ORTHO05D028373 3.9e-27 124.0 60 100.0
CSS0014758 Camellia sinensis var. sinensis HOM05D002691 ORTHO05D003304 3.2e-13 77.8 38 97.4
Hma1.2p1_0193F.1_g083900 Hydrangea macrophylla HOM05D002691 ORTHO05D003304 2.3e-11 71.6 38 86.8
Hma1.2p1_3473F.1_g336260 Hydrangea macrophylla HOM05D002691 ORTHO05D003304 2.3e-11 71.6 38 86.8
Cc05_g15270 Coffea canephora HOM05D002691 ORTHO05D003304 1.1e-10 69.3 38 84.2
Cfa021887 Carpinus fangiana HOM05D002691 ORTHO05D003304 1.5e-10 68.9 38 81.6
TAR624G0565 Trochodendron aralioides HOM05D002691 ORTHO05D003304 1.9e-10 68.6 37 86.5
CSS0023388 Camellia sinensis var. sinensis HOM05D002691 ORTHO05D003304 2.5e-10 68.2 38 84.2
CSS0042554 Camellia sinensis var. sinensis HOM05D002691 ORTHO05D003304 2.5e-10 68.2 38 84.2
TAR627G1201 Trochodendron aralioides HOM05D002691 ORTHO05D003304 2.5e-10 68.2 37 86.5
Actinidia37321 Actinidia chinensis HOM05D002691 ORTHO05D003304 3.3e-10 67.8 38 84.2
Sed0017767 Sechium edule HOM05D002691 ORTHO05D003304 3.3e-10 67.8 38 81.6
Actinidia00845 Actinidia chinensis HOM05D002691 ORTHO05D003304 4.3e-10 67.4 38 84.2
ClCG09G021520 Citrullus lanatus HOM05D002691 ORTHO05D003304 4.3e-10 67.4 38 78.9
Rhsim04G0010600 Rhododendron simsii HOM05D002691 ORTHO05D003304 4.3e-10 67.4 38 81.6
MSTRG.14502 Avicennia marina HOM05D002691 ORTHO05D003304 5.6e-10 67.0 38 78.9
Haze_09862 Corylus avellana HOM05D002691 ORTHO05D003304 5.6e-10 67.0 38 78.9
CsaV3_7G023860 Cucumis sativus L. HOM05D002691 ORTHO05D003304 5.6e-10 67.0 38 78.9
TAR629G2924 Trochodendron aralioides HOM05D002691 ORTHO05D003304 5.6e-10 67.0 36 86.1
Duzib170G0390 Durio zibethinus HOM05D002691 ORTHO05D003304 7.3e-10 66.6 38 81.6
MD05G1362500 Malus domestica HOM05D002691 ORTHO05D003304 7.3e-10 66.6 40 77.5
GSVIVG01014738001 Vitis vinifera HOM05D002691 ORTHO05D003304 7.3e-10 66.6 38 81.6
Ca_00772_v3 Cicer arietinum L. HOM05D002691 ORTHO05D003304 9.5e-10 66.2 38 81.6
MELO3C024967.2 Cucumis melo HOM05D002691 ORTHO05D003304 9.5e-10 66.2 38 76.3
Prupe.4G002700 Prunus persica HOM05D002691 ORTHO05D003304 9.5e-10 66.2 38 81.6
TPR.G17552 Trifolium pratense HOM05D002691 ORTHO05D003304 9.5e-10 66.2 38 81.6
TWI38G1555 Tripterygium wilfordii HOM05D002691 ORTHO05D003304 9.5e-10 66.2 38 78.9
Migut.H01742 Erythranthe guttata HOM05D002691 ORTHO05D003304 1.2e-09 65.9 38 78.9
Lj1A894T48 Lonicera japonica HOM05D002691 ORTHO05D003304 1.2e-09 65.9 38 76.3
Nitab4.5_0002216g0020 Nicotiana tabacum HOM05D002691 ORTHO05D003304 1.2e-09 65.9 38 78.9
Nitab4.5_0006469g0010 Nicotiana tabacum HOM05D002691 ORTHO05D003304 1.2e-09 65.9 38 78.9
Phvul.006G136300 Phaseolus vulgaris HOM05D002691 ORTHO05D003304 1.2e-09 65.9 38 78.9
TWI39G0844 Tripterygium wilfordii HOM05D002691 ORTHO05D003304 1.6e-09 65.5 38 78.9
Glyma.09G015600 Glycine max HOM05D002691 ORTHO05D003304 2.1e-09 65.1 38 78.9
Glyma.15G121400 Glycine max HOM05D002691 ORTHO05D003304 2.1e-09 65.1 38 78.9
Nitab4.5_0003328g0080 Nicotiana tabacum HOM05D002691 ORTHO05D003304 2.1e-09 65.1 38 78.9
PSO541G0817 Papaver somniferum HOM05D002691 ORTHO05D003304 2.1e-09 65.1 37 81.1
PSO675G4903 Papaver somniferum HOM05D002691 ORTHO05D003304 2.1e-09 65.1 37 81.1
Solyc12g015860.2 Solanum lycopersicum HOM05D002691 ORTHO05D003304 2.1e-09 65.1 38 76.3
PGSC0003DMG400029788 Solanum tuberosum HOM05D002691 ORTHO05D003304 2.1e-09 65.1 38 78.9
COL.COLO4_31950 Corchorus olitorius HOM05D002691 ORTHO05D003304 2.8e-09 64.7 38 81.6
Lj6g0011061 Lotus japonicus HOM05D002691 ORTHO05D003304 2.8e-09 64.7 38 78.9
Medtr2g027300 Medicago truncatula HOM05D002691 ORTHO05D003304 2.8e-09 64.7 38 78.9
Peaxi162Scf00006g00522 Petunia axillaris HOM05D002691 ORTHO05D003304 2.8e-09 64.7 38 76.3
Thecc.07G008100 Theobroma cacao HOM05D002691 ORTHO05D003304 2.8e-09 64.7 38 78.9
RcHm_v2.0_Chr5g0000321 Rosa chinensis HOM05D002691 ORTHO05D003304 3.6e-09 64.3 38 81.6
arahy.Tifrunner.gnm1.ann1.24MIBH Arachis hypogaea HOM05D002691 ORTHO05D003304 4.7e-09 63.9 38 76.3
arahy.Tifrunner.gnm1.ann1.DQ0LIB Arachis hypogaea HOM05D002691 ORTHO05D003304 4.7e-09 63.9 38 76.3
CiPaw.10G083100 Carya illinoinensis HOM05D002691 ORTHO05D003304 4.7e-09 63.9 38 78.9
AUR62017131 Chenopodium quinoa HOM05D002691 ORTHO05D003304 4.7e-09 63.9 38 76.3
Duzib213G0749 Durio zibethinus HOM05D002691 ORTHO05D003304 4.7e-09 63.9 38 76.3
Lsat_1_v5_gn_7_114941 Lactuca sativa HOM05D002691 ORTHO05D003304 4.7e-09 63.9 37 75.7
MD10G1340100 Malus domestica HOM05D002691 ORTHO05D003304 4.7e-09 63.9 38 78.9
Manes.03G143700 Manihot esculenta HOM05D002691 ORTHO05D003304 4.7e-09 63.9 38 76.3
Nitab4.5_0005478g0020 Nicotiana tabacum HOM05D002691 ORTHO05D003304 4.7e-09 63.9 38 78.9
Oeu031384.1 Olea europaea HOM05D002691 ORTHO05D003304 4.7e-09 63.9 37 78.4
CiPaw.12G140500 Carya illinoinensis HOM05D002691 ORTHO05D003304 6.2e-09 63.5 38 76.3
Sopen12g007740 Solanum pennellii HOM05D002691 ORTHO05D003304 6.2e-09 63.5 38 73.7
CANSAT11G0007 Cannabis sativa HOM05D002691 ORTHO05D003304 8.1e-09 63.2 38 76.3
CANSAT56G2557 Cannabis sativa HOM05D002691 ORTHO05D003304 8.1e-09 63.2 39 76.9
DCAR_017068 Daucus carota HOM05D002691 ORTHO05D003304 8.1e-09 63.2 36 83.3
Duzib235G0690 Durio zibethinus HOM05D002691 ORTHO05D003304 8.1e-09 63.2 38 78.9
Gohir.A01G093600 Gossypium hirsutum HOM05D002691 ORTHO05D003304 8.1e-09 63.2 38 76.3
Gohir.D01G078100 Gossypium hirsutum HOM05D002691 ORTHO05D003304 8.1e-09 63.2 38 76.3
Gorai.002G102700 Gossypium raimondii HOM05D002691 ORTHO05D003304 8.1e-09 63.2 38 76.3
Lalb_Chr15g0088311 Lupinus albus HOM05D002691 ORTHO05D003304 8.1e-09 63.2 38 76.3
MD03G1034900 Malus domestica HOM05D002691 ORTHO05D003304 8.1e-09 63.2 36 83.3
PGR042G2996 Punica granatum HOM05D002691 ORTHO05D003304 8.1e-09 63.2 38 76.3
Atru.chr8.1594 Acer truncatum HOM05D002691 ORTHO05D003304 1.1e-08 62.8 38 76.3
Ah.04g161090 Amaranthus hybridus HOM05D002691 ORTHO05D003304 1.1e-08 62.8 38 73.7
AUR62035678 Chenopodium quinoa HOM05D002691 ORTHO05D003304 1.1e-08 62.8 38 73.7
Aa31sc219G40 Aethionema arabicum HOM05D002691 ORTHO05D003304 1.4e-08 62.4 38 71.1
MELO3C024982.2 Cucumis melo HOM05D002691 ORTHO05D003304 1.4e-08 62.4 38 78.9
CsaV3_6G002810 Cucumis sativus L. HOM05D002691 ORTHO05D003304 1.4e-08 62.4 38 78.9
FAN21G2170 Fragaria x ananassa HOM05D002691 ORTHO05D003304 1.4e-08 62.4 38 73.7
Lsat_1_v5_gn_5_2060 Lactuca sativa HOM05D002691 ORTHO05D003304 1.4e-08 62.4 37 75.7
Eucgr.E03836 Eucalyptus grandis HOM05D002691 ORTHO05D003304 1.8e-08 62.0 38 73.7
PGSC0003DMG400008690 Solanum tuberosum HOM05D002691 ORTHO05D003304 1.8e-08 62.0 38 76.3
CAN.G85.27 Capsicum annuum HOM05D002691 ORTHO05D003304 2.3e-08 61.6 38 71.1
CARHR173550 Cardamine hirsuta HOM05D002691 ORTHO05D003304 2.3e-08 61.6 38 73.7
Ciclev10008832m.g Citrus clementina HOM05D002691 ORTHO05D003304 2.3e-08 61.6 38 73.7
Gohir.D05G180000 Gossypium hirsutum HOM05D002691 ORTHO05D003304 2.3e-08 61.6 38 76.3
Gorai.009G184900 Gossypium raimondii HOM05D002691 ORTHO05D003304 2.3e-08 61.6 38 76.3
MD11G1036800 Malus domestica HOM05D002691 ORTHO05D003304 2.3e-08 61.6 38 78.9
AT5G47770 Arabidopsis thaliana HOM05D002691 ORTHO05D003304 3.1e-08 61.2 37 75.7
Dinv04391 Davidia involucrata HOM05D002176 ORTHO05D002598 3.1e-08 61.2 36 80.6
FvH4_3g42290 Fragaria vesca HOM05D002691 ORTHO05D003304 3.1e-08 61.2 38 73.7
FAN21G1017 Fragaria x ananassa HOM05D002691 ORTHO05D003304 3.1e-08 61.2 38 73.7
FAN25G1507 Fragaria x ananassa HOM05D002691 ORTHO05D003304 3.1e-08 61.2 38 73.7
Carub.0008s0067 Capsella rubella HOM05D002691 ORTHO05D003304 4.0e-08 60.8 38 73.7
Cfa000020 Carpinus fangiana HOM05D002691 ORTHO05D003304 4.0e-08 60.8 38 76.3
Haze_07041 Corylus avellana HOM05D002691 ORTHO05D003304 4.0e-08 60.8 38 76.3
Nn1g07747 Nelumbo nucifera HOM05D002691 ORTHO05D003304 4.0e-08 60.8 37 75.7
Hund23087 Selenicereus undatus HOM05D002691 ORTHO05D003304 4.0e-08 60.8 38 71.1
Sopen10g001780 Solanum pennellii HOM05D002691 ORTHO05D003304 4.0e-08 60.8 38 71.1
Ah.06g181480 Amaranthus hybridus HOM05D002691 ORTHO05D003304 5.2e-08 60.5 38 73.7
CARHR223760 Cardamine hirsuta HOM05D002691 ORTHO05D003304 5.2e-08 60.5 38 71.1
CiPaw.09G110400 Carya illinoinensis HOM05D002691 ORTHO05D003304 5.2e-08 60.5 38 73.7
ClCG01G011400 Citrullus lanatus HOM05D002691 ORTHO05D003304 5.2e-08 60.5 38 73.7
Gohir.A05G176600 Gossypium hirsutum HOM05D002691 ORTHO05D003304 5.2e-08 60.5 38 73.7
RcHm_v2.0_Chr5g0075621 Rosa chinensis HOM05D002691 ORTHO05D003304 5.2e-08 60.5 38 68.4
EL10Ac4g07539 Beta vulgaris HOM05D002691 ORTHO05D003304 6.8e-08 60.1 38 71.1
Carub.0007s2422 Capsella rubella HOM05D002691 ORTHO05D003304 6.8e-08 60.1 38 71.1
Cpa.g.sc27.210 Carica papaya HOM05D002691 ORTHO05D003304 6.8e-08 60.1 38 76.3
FvH4_3g00240 Fragaria vesca HOM05D002691 ORTHO05D003304 6.8e-08 60.1 38 71.1
FAN11G2387 Fragaria x ananassa HOM05D002691 ORTHO05D003304 6.8e-08 60.1 37 75.7
FAN16G2066 Fragaria x ananassa HOM05D002691 ORTHO05D003304 6.8e-08 60.1 37 75.7
Sp2g12470 Schrenkiella parvula HOM05D002691 ORTHO05D003304 6.8e-08 60.1 38 68.4
Aqoxy7G03879 Aquilegia oxysepala HOM05D002691 ORTHO05D003304 8.9e-08 59.7 36 72.2
AL8G11080 Arabidopsis lyrata HOM05D002691 ORTHO05D003304 8.9e-08 59.7 36 75.0
CiPaw.11G206700 Carya illinoinensis HOM05D002691 ORTHO05D003304 8.9e-08 59.7 38 68.4
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 8.9e-08 59.7 44 63.6
Sed0008203 Sechium edule HOM05D002691 ORTHO05D003304 8.9e-08 59.7 38 71.1
MSTRG.7119 Avicennia marina HOM05D002691 ORTHO05D003304 1.2e-07 59.3 37 75.7
A06p44790 Brassica napus HOM05D002691 ORTHO05D003304 1.2e-07 59.3 36 75.0
C07p31410 Brassica napus HOM05D002691 ORTHO05D003304 1.2e-07 59.3 36 75.0
BolC7t43684H Brassica oleracea HOM05D002691 ORTHO05D003304 1.2e-07 59.3 36 75.0
BraA06t27352Z Brassica rapa HOM05D002691 ORTHO05D003304 1.2e-07 59.3 36 75.0
Manes.08G076550 Manihot esculenta HOM05D002691 ORTHO05D003304 1.2e-07 59.3 38 73.7
Oeu044437.1 Olea europaea HOM05D002691 ORTHO05D003304 1.2e-07 59.3 37 73.0
Cc09_g00220 Coffea canephora HOM05D002691 ORTHO05D003304 1.5e-07 58.9 37 73.0
ECA246G4737 Erigeron canadensis HOM05D002691 ORTHO05D003304 1.5e-07 58.9 36 69.4
Thhalv10025643m.g Eutrema salsugineum HOM05D002691 ORTHO05D003304 1.5e-07 58.9 38 65.8
FvH4_6g06340 Fragaria vesca HOM05D002691 ORTHO05D003304 1.5e-07 58.9 38 71.1
FAN14G3647 Fragaria x ananassa HOM05D002691 ORTHO05D003304 1.5e-07 58.9 38 71.1
Lalb_Chr18g0057401 Lupinus albus HOM05D002691 ORTHO05D028373 1.5e-07 58.9 38 71.1
VMungo0540G1696 Vigna mungo HOM05D002691 ORTHO05D003304 1.5e-07 58.9 38 71.1
HanXRQChr05g0160311 Helianthus annuus HOM05D002691 ORTHO05D003304 2.0e-07 58.5 37 67.6
THA.LOC104812789 Tarenaya hassleriana HOM05D002691 ORTHO05D003304 2.0e-07 58.5 38 73.7
AT4G17190 Arabidopsis thaliana HOM05D002691 ORTHO05D003304 2.6e-07 58.2 38 68.4
Lalb_Chr20g0119601 Lupinus albus HOM05D002691 ORTHO05D003304 2.6e-07 58.2 38 71.1
Hund23086 Selenicereus undatus HOM05D002691 ORTHO05D003304 2.6e-07 58.2 38 68.4
AL7G37540 Arabidopsis lyrata HOM05D002691 ORTHO05D003304 3.4e-07 57.8 38 65.8
HanXRQChr08g0232671 Helianthus annuus HOM05D002691 ORTHO05D003304 3.4e-07 57.8 37 70.3
BcaC03g16994 Brassica carinata HOM05D002691 ORTHO05D003304 4.4e-07 57.4 38 65.8
A02p31590 Brassica napus HOM05D002691 ORTHO05D003304 4.4e-07 57.4 38 65.8
C02p48930 Brassica napus HOM05D002691 ORTHO05D003304 4.4e-07 57.4 38 68.4
BolC2t10987H Brassica oleracea HOM05D002691 ORTHO05D003304 4.4e-07 57.4 38 65.8
BraA02t08160Z Brassica rapa HOM05D002691 ORTHO05D003304 4.4e-07 57.4 38 65.8
Potri.006G003400 Populus trichocarpa HOM05D002691 ORTHO05D003304 5.8e-07 57.0 38 71.1
TWI38G2248 Tripterygium wilfordii HOM05D002691 ORTHO05D003304 7.6e-07 56.6 38 68.4
Haze_07039 Corylus avellana HOM05D002691 ORTHO05D003304 9.9e-07 56.2 38 71.1
Nn1g07574 Nelumbo nucifera HOM05D002691 ORTHO05D003304 9.9e-07 56.2 36 75.0
SalBow8G5166 Salvia bowleyana HOM05D002691 ORTHO05D003304 9.9e-07 56.2 37 70.3
SGA_v2.0_scaffold7G03678 Striga asiatica HOM05D002691 ORTHO05D003304 9.9e-07 56.2 37 70.3
BcaNung07330 Brassica carinata HOM05D002691 ORTHO05D003304 1.3e-06 55.8 35 71.4
SalBow8G3570 Salvia bowleyana HOM05D002691 ORTHO05D003304 1.3e-06 55.8 36 72.2
Sabra06G0003100 Salix brachista HOM05D002691 ORTHO05D003304 1.7e-06 55.5 38 68.4
Hund23082 Selenicereus undatus HOM05D002691 ORTHO05D003304 1.7e-06 55.5 37 67.6
Aqoxy6G01227 Aquilegia oxysepala HOM05D002691 ORTHO05D003304 2.2e-06 55.1 34 73.5
Duzib192G0622 Durio zibethinus HOM05D002691 ORTHO05D003304 2.2e-06 55.1 38 68.4
ECA236G1841 Erigeron canadensis HOM05D002691 ORTHO05D003304 2.2e-06 55.1 36 66.7
Oeu002783.1 Olea europaea HOM05D002691 ORTHO05D003304 2.2e-06 55.1 35 74.3
Thecc.06G242200 Theobroma cacao HOM05D002691 ORTHO05D003304 2.9e-06 54.7 38 68.4
Migut.O00739 Erythranthe guttata HOM05D002691 ORTHO05D003304 3.7e-06 54.3 36 69.4
SEGI_37743 Sequoiadendron giganteum HOM05D002691 ORTHO05D003304 3.7e-06 54.3 36 61.1
SEGI_39483 Sequoiadendron giganteum HOM05D002691 ORTHO05D003304 4.9e-06 53.9 36 61.1
Sp7g17010 Schrenkiella parvula HOM05D002691 ORTHO05D003304 6.4e-06 53.5 38 60.5
SEGI_12947 Sequoiadendron giganteum HOM05D002691 ORTHO05D028373 6.4e-06 53.5 40 55.0


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