Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013047 Camellia sinensis var. sinensis HOM05D009515 ORTHO05D010550 6.9e-67 257.3 143 100.0
Hma1.2p1_0209F.1_g089180 Hydrangea macrophylla HOM05D009515 ORTHO05D010550 8.6e-17 90.9 144 45.8
Rhsim13G0018000 Rhododendron simsii HOM05D009515 ORTHO05D010550 2.5e-16 89.4 147 52.4
Rhsim01G0279600 Rhododendron simsii HOM05D009515 ORTHO05D010550 1.6e-15 86.7 181 45.9
Actinidia21082 Actinidia chinensis HOM05D001495 ORTHO05D001391 4.9e-12 75.1 143 50.3
Actinidia24859 Actinidia chinensis HOM05D009515 ORTHO05D010550 4.9e-12 75.1 129 51.9
Duzib138G0019 Durio zibethinus HOM05D009515 ORTHO05D010550 4.6e-10 68.6 148 37.2
Nn3g21250 Nelumbo nucifera HOM05D009515 ORTHO05D010550 1.3e-09 67.0 142 38.0
Cpa.g.sc9.153 Carica papaya HOM05D009515 ORTHO05D010550 1.7e-09 66.6 144 36.8
Glyma.02G151900 Glycine max HOM05D010368 ORTHO05D012190 8.6e-09 64.3 141 36.2
Duzib133G0496 Durio zibethinus HOM05D009515 ORTHO05D010550 1.1e-08 63.9 151 37.7
Duzib211G0224 Durio zibethinus HOM05D009515 ORTHO05D010550 2.5e-08 62.8 146 37.7
TAR633G2431 Trochodendron aralioides HOM05D012100 ORTHO05D010550 2.5e-08 62.8 144 38.9
TAR633G2812 Trochodendron aralioides HOM05D012100 ORTHO05D010550 2.5e-08 62.8 141 36.9
Manes.05G069200 Manihot esculenta HOM05D009515 ORTHO05D010550 9.5e-08 60.8 153 35.9
TAR365G0883 Trochodendron aralioides HOM05D012100 ORTHO05D010550 9.5e-08 60.8 141 34.0
AL5G45770 Arabidopsis lyrata HOM05D010932 ORTHO05D011540 4.7e-07 58.5 141 34.0
Phvul.001G201500 Phaseolus vulgaris HOM05D010368 ORTHO05D012190 4.7e-07 58.5 143 34.3
VMungo0720G0366 Vigna mungo HOM05D010368 ORTHO05D012190 4.7e-07 58.5 145 33.8
PGR044G1294 Punica granatum HOM05D057725 ORTHO05D010550 8.1e-07 57.8 138 39.9
PGR088G0005 Punica granatum HOM05D057725 ORTHO05D010550 8.1e-07 57.8 138 39.9
FvH4_2g24610 Fragaria vesca HOM05D012100 ORTHO05D010550 1.1e-06 57.4 139 43.2
FAN24G2924 Fragaria x ananassa HOM05D012100 ORTHO05D010550 1.1e-06 57.4 139 43.2
RcHm_v2.0_Chr6g0292431 Rosa chinensis HOM05D012100 ORTHO05D010550 1.4e-06 57.0 142 43.7
AT3G62990 Arabidopsis thaliana HOM05D013357 ORTHO05D011540 2.4e-06 56.2 144 33.3
Cc01_g20130 Coffea canephora HOM05D029916 ORTHO05D154615 2.4e-06 56.2 162 32.1
Potri.014G135560 Populus trichocarpa HOM05D009515 ORTHO05D010550 2.4e-06 56.2 153 34.6
Sabra14G0101700 Salix brachista HOM05D009515 ORTHO05D010550 2.4e-06 56.2 147 37.4
Gohir.D08G079900 Gossypium hirsutum HOM05D009515 ORTHO05D010550 4.0e-06 55.5 147 33.3
Gorai.004G084900 Gossypium raimondii HOM05D009515 ORTHO05D010550 4.0e-06 55.5 147 33.3
Manes.01G212700 Manihot esculenta HOM05D009515 ORTHO05D010550 4.0e-06 55.5 145 34.5
Oeu057552.1 Olea europaea HOM05D029916 ORTHO05D010550 4.0e-06 55.5 154 31.8


User provided reference genes

Program Settings