Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013020 Camellia sinensis var. sinensis HOM05D050991 ORTHO05D112242 3.8e-34 147.5 70 100.0
CSS0021569 Camellia sinensis var. sinensis HOM05D050991 ORTHO05D112147 3.8e-34 147.5 70 100.0
Actinidia35490 Actinidia chinensis HOM05D000103 ORTHO05D000049 4.7e-08 60.8 29 93.1
Rhsim11G0074700 Rhododendron simsii HOM05D000103 ORTHO05D000049 3.0e-07 58.2 29 86.2
vmacro06170 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 3.0e-07 58.2 27 96.3
Dinv24502 Davidia involucrata HOM05D000103 ORTHO05D000049 4.0e-07 57.8 30 83.3
Aqoxy2G02541 Aquilegia oxysepala HOM05D000103 ORTHO05D000049 1.2e-06 56.2 26 96.2
QL03p013552 Quercus lobata HOM05D000103 ORTHO05D000049 1.2e-06 56.2 28 89.3
QL03p039951 Quercus lobata HOM05D000103 ORTHO05D000049 1.2e-06 56.2 28 89.3
Lj5C320G10 Lonicera japonica HOM05D000103 ORTHO05D000049 2.6e-06 55.1 27 85.2
Lju99C7G5 Lonicera japonica HOM05D000103 ORTHO05D000049 2.6e-06 55.1 26 92.3
MD16G1137900 Malus domestica HOM05D000103 ORTHO05D000049 2.6e-06 55.1 58 48.3
Nitab4.5_0001931g0030 Nicotiana tabacum HOM05D000103 ORTHO05D000049 2.6e-06 55.1 54 51.9
Nitab4.5_0006589g0010 Nicotiana tabacum HOM05D000103 ORTHO05D000049 2.6e-06 55.1 54 51.9
vmacro01611 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 2.6e-06 55.1 29 79.3
A05p17110 Brassica napus HOM05D000103 ORTHO05D000049 3.3e-06 54.7 31 74.2
BraA05t20612Z Brassica rapa HOM05D000103 ORTHO05D000049 3.3e-06 54.7 31 74.2
Rhsim11G0074600 Rhododendron simsii HOM05D000103 ORTHO05D000049 3.3e-06 54.7 26 92.3
Rhsim11G0101100 Rhododendron simsii HOM05D000103 ORTHO05D000049 3.3e-06 54.7 26 92.3
TAR365G0922 Trochodendron aralioides HOM05D000103 ORTHO05D000049 3.3e-06 54.7 29 82.8
GSVIVG01031314001 Vitis vinifera HOM05D000103 ORTHO05D000049 3.3e-06 54.7 25 96.0
CAN.G1374.19 Capsicum annuum HOM05D000103 ORTHO05D000049 4.4e-06 54.3 28 75.0
HanXRQChr11g0339551 Helianthus annuus HOM05D000103 ORTHO05D000049 4.4e-06 54.3 31 74.2
Dinv24501 Davidia involucrata HOM05D000103 ORTHO05D000049 5.7e-06 53.9 28 85.7
Nn3g21890 Nelumbo nucifera HOM05D000103 ORTHO05D000049 5.7e-06 53.9 29 82.8
Oeu060658.1 Olea europaea HOM05D000103 ORTHO05D000049 5.7e-06 53.9 50 56.0
Rhsim11G0100900 Rhododendron simsii HOM05D000103 ORTHO05D000049 5.7e-06 53.9 27 85.2
RcHm_v2.0_Chr4g0427141 Rosa chinensis HOM05D000103 ORTHO05D000049 5.7e-06 53.9 32 75.0
Sopen01g044530 Solanum pennellii HOM05D000103 ORTHO05D000049 5.7e-06 53.9 54 48.1
TWI36G1641 Tripterygium wilfordii HOM05D000103 ORTHO05D000049 5.7e-06 53.9 26 88.5
vmacro01607 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 5.7e-06 53.9 29 79.3
AL7G40450 Arabidopsis lyrata HOM05D000103 ORTHO05D000049 7.5e-06 53.5 31 67.7
BcaB02g07832 Brassica carinata HOM05D000103 ORTHO05D000049 7.5e-06 53.5 31 71.0
C06p16470 Brassica napus HOM05D000103 ORTHO05D000049 7.5e-06 53.5 31 71.0
BolC6t36850H Brassica oleracea HOM05D000103 ORTHO05D000049 7.5e-06 53.5 31 71.0
CANSAT54G2554 Cannabis sativa HOM05D000103 ORTHO05D000049 7.5e-06 53.5 26 88.5
CARHR221940 Cardamine hirsuta HOM05D000103 ORTHO05D000049 7.5e-06 53.5 31 67.7
Lsat_1_v5_gn_9_87721 Lactuca sativa HOM05D000103 ORTHO05D000049 7.5e-06 53.5 32 81.2
Lju99C7G4 Lonicera japonica HOM05D000103 ORTHO05D000049 7.5e-06 53.5 26 88.5
MBI19_g32724_MAGBIO Magnolia biondii HOM05D000103 ORTHO05D000049 7.5e-06 53.5 54 51.9
TAR365G0841 Trochodendron aralioides HOM05D000103 ORTHO05D000049 7.5e-06 53.5 24 91.7
Aqoxy2G02543 Aquilegia oxysepala HOM05D000103 ORTHO05D000049 9.7e-06 53.1 26 84.6
CANSAT54G2972 Cannabis sativa HOM05D000103 ORTHO05D000049 9.7e-06 53.1 27 77.8
Cc02_g35700 Coffea canephora HOM05D000103 ORTHO05D000049 9.7e-06 53.1 32 65.6
ECA236G1252 Erigeron canadensis HOM05D000103 ORTHO05D000049 9.7e-06 53.1 26 84.6
ECA236G2095 Erigeron canadensis HOM05D000103 ORTHO05D000049 9.7e-06 53.1 26 84.6
Thhalv10024221m.g Eutrema salsugineum HOM05D000103 ORTHO05D000049 9.7e-06 53.1 31 64.5
RcHm_v2.0_Chr4g0427321 Rosa chinensis HOM05D000103 ORTHO05D000049 9.7e-06 53.1 26 84.6
vmacro01608 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 9.7e-06 53.1 27 81.5


User provided reference genes

Program Settings