Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013004 Camellia sinensis var. sinensis HOM05D019068 ORTHO05D110501 2.7e-48 194.9 91 100.0
CSS0045897 Camellia sinensis var. sinensis HOM05D019068 ORTHO05D110447 2.6e-27 125.2 89 73.0
CSS0033080 Camellia sinensis var. sinensis HOM05D019068 ORTHO05D110756 2.7e-24 115.2 82 68.3
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 5.0e-10 67.8 32 93.8
CSS0006597 Camellia sinensis var. sinensis HOM05D019068 ORTHO05D112990 9.4e-09 63.5 36 77.8
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.4e-09 63.5 49 61.2
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-08 63.2 47 59.6
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-08 62.8 49 61.2
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-08 62.4 49 61.2
CSS0008327 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-08 62.4 49 57.1
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-08 62.4 49 61.2
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-08 62.0 49 59.2
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-08 61.6 40 70.0
CSS0021854 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-08 61.6 40 70.0
CSS0017517 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-08 61.2 33 81.8
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.1e-08 60.8 49 59.2
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.1e-08 60.8 49 57.1
CSS0003101 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-07 59.7 38 68.4
CSS0019890 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-07 59.7 38 68.4
CSS0047776 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-07 59.7 38 68.4
CSS0034278 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-07 59.3 34 73.5
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-07 58.5 35 71.4
CSS0001665 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D024693 3.9e-07 58.2 33 75.8
CSS0008665 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.9e-07 58.2 33 75.8
CSS0037515 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.1e-07 57.8 33 72.7
CSS0043234 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.1e-07 57.8 33 72.7
CSS0045133 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.7e-07 57.4 42 59.5
CSS0033194 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 8.8e-07 57.0 52 55.8
CSS0048334 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000002 1.1e-06 56.6 39 66.7
Sopen02g004760 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 56.6 57 52.6
Sopen09g018640 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 56.6 53 54.7
CSS0002780 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-06 56.2 46 56.5
Sopen03g014080 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-06 56.2 74 45.9
Sopen05g017870 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-06 56.2 53 52.8
CSS0009189 Camellia sinensis var. sinensis HOM05D019068 ORTHO05D111399 2.6e-06 55.5 35 74.3
CSS0033949 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.6e-06 55.5 38 63.2
CSS0044817 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.6e-06 55.5 38 63.2
Sopen10g009180 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-06 55.5 53 54.7
CSS0006373 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.3e-06 55.1 38 63.2
QL09p028348 Quercus lobata HOM05D000004 ORTHO05D000002 3.3e-06 55.1 88 40.9
HanXRQChr10g0299671 Helianthus annuus HOM05D000004 ORTHO05D000002 4.4e-06 54.7 39 56.4
QL11p024965 Quercus lobata HOM05D000004 ORTHO05D000002 4.4e-06 54.7 88 39.8
Sopen05g012820 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-06 54.7 53 50.9
Sopen08g016480 Solanum pennellii HOM05D000004 ORTHO05D000034 4.4e-06 54.7 37 62.2
Sopen12g009470 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-06 54.7 50 54.0
Sopen01g018100 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen01g027950 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 50 54.0
Sopen02g004560 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen03g019770 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen04g009400 Solanum pennellii HOM05D000004 ORTHO05D000034 5.7e-06 54.3 56 48.2
Sopen04g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen05g011910 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen05g017510 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen05g017540 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen05g018490 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen05g023720 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 56 51.8
Sopen06g009830 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen06g011960 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen06g012340 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen06g012360 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen07g009650 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen07g009680 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen07g009730 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen07g011070 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen07g017600 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen08g007580 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen08g015130 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen11g012850 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen11g012870 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen11g022520 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 50 54.0
Sopen11g022720 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen11g023250 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen12g025390 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen12g025430 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
Sopen12g025510 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 54.3 53 52.8
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.4e-06 53.9 49 55.1
QL03p012298 Quercus lobata HOM05D000004 ORTHO05D000002 7.4e-06 53.9 88 40.9
Sopen02g011780 Solanum pennellii HOM05D000004 ORTHO05D000002 7.4e-06 53.9 50 52.0
Sopen09g018490 Solanum pennellii HOM05D000004 ORTHO05D000002 7.4e-06 53.9 50 54.0
Sopen10g007750 Solanum pennellii HOM05D000004 ORTHO05D000002 7.4e-06 53.9 53 50.9
CSS0004810 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.7e-06 53.5 40 55.0
CSS0021717 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.7e-06 53.5 40 60.0
Ca_06828_v3 Cicer arietinum L. HOM05D000004 ORTHO05D009627 9.7e-06 53.5 40 60.0
Sopen01g010870 Solanum pennellii HOM05D000004 ORTHO05D000002 9.7e-06 53.5 79 38.0
Sopen06g005900 Solanum pennellii HOM05D000004 ORTHO05D000002 9.7e-06 53.5 53 50.9
Sopen08g018050 Solanum pennellii HOM05D000004 ORTHO05D000695 9.7e-06 53.5 37 62.2
Sopen12g016910 Solanum pennellii HOM05D000004 ORTHO05D000034 9.7e-06 53.5 53 49.1


User provided reference genes

Program Settings