Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 1.7e-131 472.6 230 100.0
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 1.9e-130 469.2 230 99.1
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 2.9e-107 392.1 230 82.2
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 4.6e-105 384.8 212 85.4
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 4.6e-105 384.8 233 82.4
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 1.1e-103 380.2 230 79.6
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 3.3e-103 378.6 230 79.6
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 3.3e-103 378.6 224 80.4
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 4.3e-103 378.3 217 83.9
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 5.7e-103 377.9 223 80.7
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 1.3e-102 376.7 212 84.0
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 1.3e-102 376.7 212 84.0
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 2.8e-102 375.6 214 82.7
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 3.7e-102 375.2 223 80.7
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 4.8e-102 374.8 213 84.0
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 6.3e-102 374.4 212 83.5
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 6.3e-102 374.4 222 80.6
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 8.2e-102 374.0 217 82.5
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 8.2e-102 374.0 221 79.2
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 1.1e-101 373.6 223 80.3
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 1.1e-101 373.6 223 79.8
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 1.8e-101 372.9 213 83.1
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 1.8e-101 372.9 223 77.1
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 1.8e-101 372.9 211 81.0
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 2.4e-101 372.5 230 80.4
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 2.4e-101 372.5 216 79.2
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 3.1e-101 372.1 217 79.3
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 6.9e-101 370.9 223 79.8
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 1.5e-100 369.8 200 84.5
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 5.9e-100 367.9 230 76.5
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 5.9e-100 367.9 214 82.2
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 5.9e-100 367.9 202 83.2
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 7.7e-100 367.5 224 79.0
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 1.7e-99 366.3 230 75.7
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 2.9e-99 365.5 220 79.5
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 5.0e-99 364.8 223 78.9
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 6.5e-99 364.4 214 80.4
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 8.5e-99 364.0 217 79.3
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 8.5e-99 364.0 223 78.9
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 1.1e-98 363.6 214 80.4
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 1.4e-98 363.2 243 73.7
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 1.9e-98 362.8 230 76.5
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 2.5e-98 362.5 207 81.6
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 5.5e-98 361.3 204 84.8
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 5.5e-98 361.3 205 81.0
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 9.4e-98 360.5 224 78.1
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 9.4e-98 360.5 221 79.2
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 2.1e-97 359.4 222 75.2
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 2.7e-97 359.0 207 81.6
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 2.7e-97 359.0 230 74.8
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 3.6e-97 358.6 221 76.5
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 6.1e-97 357.8 214 76.2
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 1.0e-96 357.1 212 78.8
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 3.0e-96 355.5 212 76.4
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 6.7e-96 354.4 207 77.8
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 6.7e-96 354.4 212 77.4
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 1.1e-95 353.6 234 77.4
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 3.3e-95 352.1 208 78.4
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 7.4e-95 350.9 214 76.6
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 9.7e-95 350.5 214 76.2
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 1.1e-93 347.1 224 73.7
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 9.1e-93 344.0 214 74.8
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 1.2e-92 343.6 219 74.9
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 2.6e-92 342.4 208 76.4
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 1.3e-91 340.1 221 70.6
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 1.9e-90 336.3 218 74.3
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 2.5e-90 335.9 219 73.5
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 2.5e-90 335.9 219 73.5
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 3.2e-90 335.5 219 73.5
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 3.2e-90 335.5 217 74.7
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 3.2e-90 335.5 212 72.2
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 4.2e-90 335.1 211 75.8
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 1.6e-89 333.2 219 72.6
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 3.6e-89 332.0 200 77.5
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 8.0e-89 330.9 200 77.0
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 3.9e-88 328.6 222 72.1
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 3.9e-88 328.6 222 72.1
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 6.7e-88 327.8 212 71.2
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 2.6e-87 325.9 222 68.5
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 7.4e-87 324.3 263 63.1
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 1.3e-86 323.6 178 84.3
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 6.5e-83 311.2 189 77.2
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 9.4e-82 307.4 183 74.3
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 9.4e-82 307.4 178 79.2
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 8.2e-78 294.3 190 70.5
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 5.3e-77 291.6 180 75.6
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 9.1e-77 290.8 208 68.3
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 1.0e-72 277.3 146 83.6
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 2.8e-70 269.2 230 63.5
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 6.3e-70 268.1 169 75.1
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 6.3e-70 268.1 221 57.0
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 9.5e-66 254.2 227 61.2
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 2.8e-65 252.7 191 57.1
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 6.8e-64 248.1 211 58.8
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 6.3e-62 241.5 140 78.6
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 1.3e-59 233.8 216 50.9
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 4.7e-57 225.3 130 78.5
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 6.8e-56 221.5 137 72.3
Sopen03g037430 Solanum pennellii HOM05D006727 ORTHO05D008408 1.5e-47 193.7 115 77.4
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 9.8e-47 191.0 126 69.8
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 1.1e-45 187.6 103 81.6
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 2.1e-44 183.3 153 52.3
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 4.4e-39 165.6 205 38.5
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 1.3e-35 154.1 128 61.7
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 1.1e-34 151.0 128 59.4
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 8.1e-33 144.8 196 33.7
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 9.9e-31 137.9 81 75.3
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 7.1e-29 131.7 76 75.0
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 4.6e-28 129.0 105 55.2
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 5.1e-27 125.6 173 33.5
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 1.6e-25 120.6 74 74.3
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 2.2e-22 110.2 73 61.6
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 6.0e-20 102.1 59 78.0
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 7.8e-20 101.7 51 86.3
BolC8t50296H Brassica oleracea HOM05D006727 ORTHO05D008408 1.1e-16 91.3 71 60.6
Carub.0007s3202 Capsella rubella HOM05D006727 ORTHO05D008408 5.1e-11 72.4 58 69.0
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 8.7e-11 71.6 60 61.7
A03p48380 Brassica napus HOM05D023373 ORTHO05D024557 2.8e-09 66.6 92 44.6


User provided reference genes

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