Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012915 Camellia sinensis var. sinensis HOM05D006655 ORTHO05D007986 3.7e-54 214.5 102 100.0
Actinidia06937 Actinidia chinensis HOM05D006655 ORTHO05D007986 2.8e-22 108.6 59 86.4
vmacro04005 Vaccinium macrocarpon HOM05D006655 ORTHO05D007986 3.7e-22 108.2 58 86.2
Rhsim13G0216500 Rhododendron simsii HOM05D006655 ORTHO05D007986 1.1e-21 106.7 59 84.7
GSVIVG01037232001 Vitis vinifera HOM05D006655 ORTHO05D007986 1.8e-21 105.9 59 81.4
Ciclev10015876m.g Citrus clementina HOM05D006655 ORTHO05D007986 3.1e-21 105.1 59 81.4
MBI13_g19379_MAGBIO Magnolia biondii HOM05D006655 ORTHO05D007986 7.0e-21 104.0 59 79.7
Manes.01G182300 Manihot esculenta HOM05D006655 ORTHO05D007986 7.0e-21 104.0 58 81.0
Dinv36200 Davidia involucrata HOM05D006655 ORTHO05D007986 9.2e-21 103.6 59 84.7
Duzib168G2063 Durio zibethinus HOM05D006655 ORTHO05D007986 9.2e-21 103.6 56 83.9
TAR623G0880 Trochodendron aralioides HOM05D006655 ORTHO05D007986 9.2e-21 103.6 59 81.4
Haze_23196 Corylus avellana HOM05D006655 ORTHO05D007986 1.2e-20 103.2 56 82.1
Thecc.09G243400 Theobroma cacao HOM05D006655 ORTHO05D007986 2.0e-20 102.4 56 82.1
Cfa009833 Carpinus fangiana HOM05D006655 ORTHO05D007986 2.7e-20 102.1 56 83.9
AUR62000173 Chenopodium quinoa HOM05D006655 ORTHO05D007986 2.7e-20 102.1 59 79.7
AUR62039838 Chenopodium quinoa HOM05D006655 ORTHO05D007986 2.7e-20 102.1 59 79.7
Eucgr.B03717 Eucalyptus grandis HOM05D006655 ORTHO05D007986 3.5e-20 101.7 57 82.5
Sp7g29360 Schrenkiella parvula HOM05D006655 ORTHO05D007986 3.5e-20 101.7 59 79.7
ClCG03G012910 Citrullus lanatus HOM05D006655 ORTHO05D007986 4.5e-20 101.3 59 76.3
BcaNung04132 Brassica carinata HOM05D006655 ORTHO05D007986 5.9e-20 100.9 59 79.7
C07p58710 Brassica napus HOM05D006655 ORTHO05D007986 5.9e-20 100.9 59 79.7
Duzib170G0104 Durio zibethinus HOM05D006655 ORTHO05D007986 5.9e-20 100.9 56 80.4
Gohir.A09G111300 Gossypium hirsutum HOM05D006655 ORTHO05D007986 5.9e-20 100.9 56 80.4
Gohir.D09G107900 Gossypium hirsutum HOM05D006655 ORTHO05D007986 5.9e-20 100.9 56 80.4
Gorai.006G125600 Gossypium raimondii HOM05D006655 ORTHO05D007986 5.9e-20 100.9 56 80.4
SGA_v2.0_scaffold8G04557 Striga asiatica HOM05D006655 ORTHO05D007986 5.9e-20 100.9 56 83.9
CARHR239410 Cardamine hirsuta HOM05D006655 ORTHO05D007986 7.8e-20 100.5 58 79.3
Oeu061293.2 Olea europaea HOM05D006655 ORTHO05D007986 7.8e-20 100.5 56 82.1
Zm00001eb017170 Zea mays HOM05D006655 ORTHO05D007986 1.0e-19 100.1 56 80.4
Zm00001eb394530 Zea mays HOM05D006655 ORTHO05D007986 1.0e-19 100.1 56 80.4
EL10Ac4g10174 Beta vulgaris HOM05D006655 ORTHO05D007986 1.3e-19 99.8 59 74.6
COL.COLO4_04115 Corchorus olitorius HOM05D006655 ORTHO05D007986 1.3e-19 99.8 56 80.4
Migut.D00645 Erythranthe guttata HOM05D006655 ORTHO05D007986 1.3e-19 99.8 56 80.4
AL7G20510 Arabidopsis lyrata HOM05D006655 ORTHO05D007986 1.7e-19 99.4 59 78.0
A03p60830 Brassica napus HOM05D006655 ORTHO05D007986 1.7e-19 99.4 59 78.0
Nn2g14958 Nelumbo nucifera HOM05D006655 ORTHO05D007986 1.7e-19 99.4 59 78.0
Potri.001G253900 Populus trichocarpa HOM05D006655 ORTHO05D007986 1.7e-19 99.4 56 80.4
CiPaw.14G115600 Carya illinoinensis HOM05D006655 ORTHO05D007986 2.3e-19 99.0 56 78.6
Sc06g0004660 Simmondsia chinensis HOM05D006655 ORTHO05D007986 2.3e-19 99.0 59 76.3
Atru.chr3.2616 Acer truncatum HOM05D006655 ORTHO05D007986 2.9e-19 98.6 56 82.1
Cc01_g05880 Coffea canephora HOM05D006655 ORTHO05D007986 3.8e-19 98.2 58 74.1
TWI38G0712 Tripterygium wilfordii HOM05D006655 ORTHO05D007986 3.8e-19 98.2 56 76.8
ECA248G0748 Erigeron canadensis HOM05D006655 ORTHO05D007986 5.0e-19 97.8 59 76.3
PSO339G6694 Papaver somniferum HOM05D006655 ORTHO05D007986 5.0e-19 97.8 59 78.0
PSO384G1723 Papaver somniferum HOM05D006655 ORTHO05D007986 5.0e-19 97.8 59 78.0
AT4G31530 Arabidopsis thaliana HOM05D006655 ORTHO05D007986 6.6e-19 97.4 59 76.3
Prupe.4G258400 Prunus persica HOM05D006655 ORTHO05D007986 6.6e-19 97.4 59 76.3
Lsat_1_v5_gn_1_77640 Lactuca sativa HOM05D006655 ORTHO05D007986 8.6e-19 97.1 59 74.6
RcHm_v2.0_Chr5g0050831 Rosa chinensis HOM05D006655 ORTHO05D007986 8.6e-19 97.1 59 76.3
THA.LOC104816930 Tarenaya hassleriana HOM05D006655 ORTHO05D007986 8.6e-19 97.1 59 76.3
Carub.0007s0904 Capsella rubella HOM05D006655 ORTHO05D007986 1.1e-18 96.7 59 76.3
Thhalv10025684m.g Eutrema salsugineum HOM05D006655 ORTHO05D007986 1.1e-18 96.7 59 76.3
Aa31LG2G18820 Aethionema arabicum HOM05D006655 ORTHO05D007986 1.5e-18 96.3 56 78.6
Cpa.g.sc84.14 Carica papaya HOM05D006655 ORTHO05D007986 1.9e-18 95.9 57 77.2
CsaV3_1G043150 Cucumis sativus L. HOM05D006655 ORTHO05D007986 1.9e-18 95.9 55 78.2
FvH4_3g28150 Fragaria vesca HOM05D006655 ORTHO05D007986 1.9e-18 95.9 56 78.6
FAN11G1204 Fragaria x ananassa HOM05D006655 ORTHO05D007986 1.9e-18 95.9 56 78.6
FAN16G3233 Fragaria x ananassa HOM05D006655 ORTHO05D007986 1.9e-18 95.9 56 78.6
FAN21G0719 Fragaria x ananassa HOM05D006655 ORTHO05D007986 1.9e-18 95.9 56 78.6
PGR102G2275 Punica granatum HOM05D006655 ORTHO05D007986 1.9e-18 95.9 59 76.3
Hund21967 Selenicereus undatus HOM05D006655 ORTHO05D007986 1.9e-18 95.9 56 78.6
arahy.Tifrunner.gnm1.ann1.760I9C Arachis hypogaea HOM05D006655 ORTHO05D007986 2.5e-18 95.5 59 69.5
MSTRG.18452 Avicennia marina HOM05D006655 ORTHO05D007986 2.5e-18 95.5 56 76.8
Ca_23178_v3 Cicer arietinum L. HOM05D006655 ORTHO05D007986 2.5e-18 95.5 59 72.9
MD03G1169200 Malus domestica HOM05D006655 ORTHO05D007986 2.5e-18 95.5 59 74.6
arahy.Tifrunner.gnm1.ann1.DT3DJP Arachis hypogaea HOM05D006655 ORTHO05D007986 4.3e-18 94.7 55 72.7
MELO3C015152.2 Cucumis melo HOM05D006655 ORTHO05D007986 4.3e-18 94.7 55 74.5
Medtr8g010600 Medicago truncatula HOM05D006655 ORTHO05D007986 4.3e-18 94.7 56 71.4
HPP92_025004 Vanilla planifolia HOM05D006655 ORTHO05D007986 5.6e-18 94.4 56 75.0
AagrBONN_evm.TU.Sc2ySwM_228.2449 Anthoceros agrestis HOM05D006655 ORTHO05D007986 7.3e-18 94.0 57 68.4
Nitab4.5_0000718g0100 Nicotiana tabacum HOM05D006655 ORTHO05D007986 7.3e-18 94.0 56 73.2
HanXRQChr01g0023951 Helianthus annuus HOM05D006655 ORTHO05D007986 9.5e-18 93.6 58 72.4
Psat2g068960 Pisum sativum HOM05D006655 ORTHO05D007986 1.2e-17 93.2 56 71.4
VMungo0331G0819 Vigna mungo HOM05D006655 ORTHO05D007986 1.2e-17 93.2 56 69.6
Lj3g0004618 Lotus japonicus HOM05D006655 ORTHO05D007986 1.6e-17 92.8 56 69.6
Medtr8g010700 Medicago truncatula HOM05D006655 ORTHO05D007986 2.1e-17 92.4 56 69.6
Glyma.03G092500 Glycine max HOM05D006655 ORTHO05D007986 3.6e-17 91.7 59 64.4
SEGI_01007 Sequoiadendron giganteum HOM05D006655 ORTHO05D007986 3.6e-17 91.7 64 67.2
BraA03t15119Z Brassica rapa HOM05D006655 ORTHO05D007986 4.7e-17 91.3 73 64.4
DCAR_029978 Daucus carota HOM05D006655 ORTHO05D007986 4.7e-17 91.3 59 71.2
Phvul.010G032900 Phaseolus vulgaris HOM05D006655 ORTHO05D007986 4.7e-17 91.3 55 67.3
Lalb_Chr12g0210111 Lupinus albus HOM05D006655 ORTHO05D007986 6.1e-17 90.9 55 70.9
Peaxi162Scf00050g00119 Petunia axillaris HOM05D006655 ORTHO05D007986 6.1e-17 90.9 59 67.8
unitig_90.g27460 Utricularia gibba HOM05D006655 ORTHO05D007986 8.0e-17 90.5 59 71.2
CDE08G0434 Ceratophyllum demersum HOM05D006655 ORTHO05D007986 1.0e-16 90.1 57 68.4
Glyma.16G082200 Glycine max HOM05D006655 ORTHO05D007986 1.8e-16 89.4 55 65.5
CAN.G379.22 Capsicum annuum HOM05D006655 ORTHO05D007986 2.3e-16 89.0 55 70.9
Sabra16G0154600 Salix brachista HOM05D006655 ORTHO05D007986 2.3e-16 89.0 67 67.2
BolC7t46320H Brassica oleracea HOM05D006655 ORTHO05D007986 3.0e-16 88.6 72 63.9
Nitab4.5_0014839g0010 Nicotiana tabacum HOM05D006655 ORTHO05D007986 5.2e-16 87.8 55 69.1
Solyc01g008920.4 Solanum lycopersicum HOM05D006655 ORTHO05D007986 6.8e-16 87.4 55 67.3
Sopen01g004410 Solanum pennellii HOM05D006655 ORTHO05D007986 6.8e-16 87.4 55 67.3
Mapoly0096s0016 Marchantia polymorpha HOM05D006655 ORTHO05D007986 7.5e-15 84.0 55 65.5
Pp3c18_4890 Physcomitrium patens HOM05D006655 ORTHO05D007986 9.8e-15 83.6 56 69.6
SMO347G0004 Selaginella moellendorffii HOM05D006655 ORTHO05D007986 2.2e-14 82.4 55 67.3
TPR.G24582 Trifolium pratense HOM05D006655 ORTHO05D007986 9.2e-13 77.0 44 77.3
CBR_g3452 Chara braunii HOM05D006655 ORTHO05D007986 5.0e-11 71.2 59 55.9
ATR0721G096 Amborella trichopoda HOM05D006655 ORTHO05D007986 1.2e-09 66.6 37 83.8
Aqoxy1G00312 Aquilegia oxysepala HOM05D006655 ORTHO05D007986 2.1e-09 65.9 37 83.8
QL01p017764 Quercus lobata HOM05D006655 ORTHO05D007986 2.1e-09 65.9 37 81.1
MBI13_g19378_MAGBIO Magnolia biondii HOM05D006655 ORTHO05D007986 4.7e-09 64.7 36 86.1
Zm00001eb128080 Zea mays HOM05D006655 ORTHO05D007986 4.7e-09 64.7 37 83.8
PGSC0003DMG402022708 Solanum tuberosum HOM05D006655 ORTHO05D007986 1.1e-08 63.5 36 80.6
Cre03.g181250 Chlamydomonas reinhardtii HOM05D006655 ORTHO05D007986 4.9e-06 54.7 57 47.4


User provided reference genes

Program Settings