Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012855 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 2.4e-65 251.9 118 100.0
CSS0020773 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 9.2e-65 250.0 118 99.2
CSS0005885 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 2.1e-61 238.8 114 97.4
CSS0048073 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 2.1e-61 238.8 114 97.4
Rhsim11G0024700 Rhododendron simsii HOM05D006366 ORTHO05D008467 8.3e-58 226.9 114 89.5
Actinidia01262 Actinidia chinensis HOM05D006366 ORTHO05D008467 5.9e-56 220.7 114 88.6
vmacro00060 Vaccinium macrocarpon HOM05D006366 ORTHO05D008467 7.8e-56 220.3 114 86.8
Actinidia32776 Actinidia chinensis HOM05D006366 ORTHO05D008467 1.5e-54 216.1 114 87.7
Peaxi162Scf00351g00618 Petunia axillaris HOM05D006366 ORTHO05D008467 3.3e-54 214.9 114 84.2
Solyc07g044830.3 Solanum lycopersicum HOM05D006366 ORTHO05D008467 7.3e-54 213.8 114 84.2
PGSC0003DMG400000936 Solanum tuberosum HOM05D006366 ORTHO05D008467 7.3e-54 213.8 114 84.2
Nitab4.5_0006724g0060 Nicotiana tabacum HOM05D001798 ORTHO05D008467 9.5e-54 213.4 115 82.6
Nitab4.5_0006644g0050 Nicotiana tabacum HOM05D006366 ORTHO05D008467 3.6e-53 211.5 114 82.5
Sopen07g023380 Solanum pennellii HOM05D006366 ORTHO05D008467 4.7e-53 211.1 114 83.3
CAN.G946.5 Capsicum annuum HOM05D006366 ORTHO05D008467 6.2e-53 210.7 114 84.2
Dinv26512 Davidia involucrata HOM05D006366 ORTHO05D008467 4.0e-52 208.0 114 82.5
Thecc.01G164300 Theobroma cacao HOM05D006366 ORTHO05D008467 8.9e-52 206.8 115 79.1
Gohir.A12G087400 Gossypium hirsutum HOM05D006366 ORTHO05D008467 2.0e-51 205.7 115 78.3
Gorai.008G096000 Gossypium raimondii HOM05D006366 ORTHO05D008467 2.0e-51 205.7 115 78.3
MSTRG.24998 Avicennia marina HOM05D006366 ORTHO05D008467 3.4e-51 204.9 113 80.5
Cc05_g00620 Coffea canephora HOM05D006366 ORTHO05D008467 3.4e-51 204.9 114 78.9
Prupe.3G191400 Prunus persica HOM05D006366 ORTHO05D008467 3.4e-51 204.9 114 80.7
Gohir.D12G085600 Gossypium hirsutum HOM05D006366 ORTHO05D008467 7.5e-51 203.8 115 77.4
Duzib147G0458 Durio zibethinus HOM05D006366 ORTHO05D008467 9.8e-51 203.4 115 77.4
Glyma.13G004000 Glycine max HOM05D006366 ORTHO05D008467 2.2e-50 202.2 115 77.4
Migut.C00287 Erythranthe guttata HOM05D006366 ORTHO05D008467 2.9e-50 201.8 114 78.9
GSVIVG01012987001 Vitis vinifera HOM05D006366 ORTHO05D008467 3.7e-50 201.4 114 78.9
SalBow7G2372 Salvia bowleyana HOM05D006366 ORTHO05D008467 4.9e-50 201.1 114 78.9
Glyma.20G065200 Glycine max HOM05D006366 ORTHO05D008467 6.4e-50 200.7 115 76.5
Sc06g0005840 Simmondsia chinensis HOM05D006366 ORTHO05D008467 6.4e-50 200.7 118 73.7
DCAR_009833 Daucus carota HOM05D006366 ORTHO05D008467 8.3e-50 200.3 113 78.8
CANSAT64G1607 Cannabis sativa HOM05D006366 ORTHO05D008467 1.1e-49 199.9 114 77.2
Cfa017853 Carpinus fangiana HOM05D006366 ORTHO05D008467 1.1e-49 199.9 114 78.1
Hma1.2p1_0451F.1_g155730 Hydrangea macrophylla HOM05D006366 ORTHO05D008467 1.1e-49 199.9 114 76.3
MBI07_g10945_MAGBIO Magnolia biondii HOM05D006366 ORTHO05D008467 1.1e-49 199.9 111 78.4
arahy.Tifrunner.gnm1.ann1.Q8HZUY Arachis hypogaea HOM05D006366 ORTHO05D008467 1.4e-49 199.5 115 74.8
arahy.Tifrunner.gnm1.ann1.ZW16GX Arachis hypogaea HOM05D006366 ORTHO05D008467 1.4e-49 199.5 115 74.8
HanXRQChr17g0540961 Helianthus annuus HOM05D006366 ORTHO05D008467 1.4e-49 199.5 113 77.9
MD09G1135300 Malus domestica HOM05D006366 ORTHO05D008467 1.4e-49 199.5 114 75.4
Atru.chr8.945 Acer truncatum HOM05D006366 ORTHO05D008467 1.9e-49 199.1 115 75.7
COL.COLO4_29916 Corchorus olitorius HOM05D006366 ORTHO05D008467 2.4e-49 198.7 115 74.8
TWI60G0958 Tripterygium wilfordii HOM05D006366 ORTHO05D008467 2.4e-49 198.7 114 76.3
Lsat_1_v5_gn_3_36241 Lactuca sativa HOM05D006366 ORTHO05D008467 4.1e-49 198.0 109 79.8
Sabra16G0023400 Salix brachista HOM05D006366 ORTHO05D008467 4.1e-49 198.0 114 75.4
Sabra16G0028900 Salix brachista HOM05D006366 ORTHO05D008467 4.1e-49 198.0 114 75.4
Phvul.006G002200 Phaseolus vulgaris HOM05D006366 ORTHO05D008467 7.0e-49 197.2 115 75.7
Ciclev10009311m.g Citrus clementina HOM05D006366 ORTHO05D008467 1.2e-48 196.4 114 74.6
Eucgr.K01331 Eucalyptus grandis HOM05D006366 ORTHO05D008467 1.2e-48 196.4 114 74.6
Ca_16310_v3 Cicer arietinum L. HOM05D006366 ORTHO05D008467 1.6e-48 196.1 115 75.7
Potri.016G022700 Populus trichocarpa HOM05D006366 ORTHO05D008467 2.0e-48 195.7 114 75.4
Sed0019883 Sechium edule HOM05D006366 ORTHO05D008467 2.0e-48 195.7 114 73.7
Psat5g107960 Pisum sativum HOM05D006366 ORTHO05D008467 2.7e-48 195.3 112 77.7
Manes.09G000100 Manihot esculenta HOM05D006366 ORTHO05D008467 3.5e-48 194.9 115 73.9
TAR624G0611 Trochodendron aralioides HOM05D006366 ORTHO05D008467 4.6e-48 194.5 111 77.5
Nn3g18048 Nelumbo nucifera HOM05D006366 ORTHO05D008467 7.8e-48 193.7 114 74.6
RcHm_v2.0_Chr2g0154731 Rosa chinensis HOM05D006366 ORTHO05D008467 7.8e-48 193.7 114 74.6
Lj6g0003976 Lotus japonicus HOM05D006366 ORTHO05D008467 1.3e-47 193.0 113 73.5
CiPaw.15G093200 Carya illinoinensis HOM05D006366 ORTHO05D008467 1.7e-47 192.6 114 75.4
CsaV3_4G032210 Cucumis sativus L. HOM05D006366 ORTHO05D008467 1.7e-47 192.6 113 74.3
PGR004G2515 Punica granatum HOM05D006366 ORTHO05D008467 3.0e-47 191.8 114 72.8
Hund24327 Selenicereus undatus HOM05D006366 ORTHO05D008467 3.0e-47 191.8 114 72.8
Aqoxy1G01337 Aquilegia oxysepala HOM05D006366 ORTHO05D008467 3.9e-47 191.4 114 71.9
MELO3C026394.2 Cucumis melo HOM05D006366 ORTHO05D008467 5.0e-47 191.0 113 73.5
Medtr3g081290 Medicago truncatula HOM05D006366 ORTHO05D008467 6.6e-47 190.7 113 74.3
FAN05G0502 Fragaria x ananassa HOM05D006366 ORTHO05D008467 1.1e-46 189.9 111 75.7
SGA_v2.0_scaffold26G11309 Striga asiatica HOM05D006366 ORTHO05D008467 1.1e-46 189.9 114 71.9
THA.LOC104803019 Tarenaya hassleriana HOM05D006366 ORTHO05D008467 1.1e-46 189.9 114 72.8
ClCG11G016700 Citrullus lanatus HOM05D006366 ORTHO05D008467 1.5e-46 189.5 115 71.3
Lalb_Chr22g0360801 Lupinus albus HOM05D006366 ORTHO05D008467 1.5e-46 189.5 112 72.3
Cpa.g.sc8.298 Carica papaya HOM05D006366 ORTHO05D008467 2.5e-46 188.7 114 72.8
HPP92_021470 Vanilla planifolia HOM05D006366 ORTHO05D008467 3.3e-46 188.3 114 71.9
Carub.0007s2713 Capsella rubella HOM05D006366 ORTHO05D008467 4.3e-46 188.0 113 75.2
FAN09G0641 Fragaria x ananassa HOM05D006366 ORTHO05D008467 4.3e-46 188.0 111 74.8
PSO675G0146 Papaver somniferum HOM05D006366 ORTHO05D008467 9.5e-46 186.8 111 73.0
AL7G40860 Arabidopsis lyrata HOM05D006366 ORTHO05D008467 1.2e-45 186.4 113 73.5
AUR62015180 Chenopodium quinoa HOM05D006366 ORTHO05D008467 1.2e-45 186.4 114 71.1
PSO541G2638 Papaver somniferum HOM05D006366 ORTHO05D008467 1.2e-45 186.4 111 72.1
EL10Ac9g22887 Beta vulgaris HOM05D006366 ORTHO05D008467 1.6e-45 186.0 114 71.1
Aa31LG9G2360 Aethionema arabicum HOM05D006366 ORTHO05D008467 2.8e-45 185.3 113 72.6
AT4G14965 Arabidopsis thaliana HOM05D006366 ORTHO05D008467 6.2e-45 184.1 113 72.6
CARHR221600 Cardamine hirsuta HOM05D006366 ORTHO05D008467 6.2e-45 184.1 113 71.7
AUR62017635 Chenopodium quinoa HOM05D006366 ORTHO05D008467 6.2e-45 184.1 114 70.2
Thhalv10026107m.g Eutrema salsugineum HOM05D006366 ORTHO05D008467 1.4e-44 183.0 113 70.8
ATR0737G147 Amborella trichopoda HOM05D006366 ORTHO05D008467 3.1e-44 181.8 110 70.9
Sp7g13140 Schrenkiella parvula HOM05D006366 ORTHO05D008467 4.0e-44 181.4 113 72.6
A05p16880 Brassica napus HOM05D006366 ORTHO05D008467 1.5e-43 179.5 113 70.8
BraA05t20592Z Brassica rapa HOM05D006366 ORTHO05D008467 1.5e-43 179.5 113 70.8
Zm00001eb400650 Zea mays HOM05D006366 ORTHO05D008467 1.5e-43 179.5 113 65.5
VMungo0540G1919 Vigna mungo HOM05D006366 ORTHO05D008467 2.6e-43 178.7 100 79.0
Os03g0205500 Oryza sativa ssp. japonica HOM05D006366 ORTHO05D008467 3.4e-43 178.3 113 64.6
BcaB02g07847 Brassica carinata HOM05D006366 ORTHO05D008467 4.4e-43 177.9 113 69.9
C06p16670 Brassica napus HOM05D006366 ORTHO05D008467 5.8e-43 177.6 113 69.9
BolC6t36868H Brassica oleracea HOM05D006366 ORTHO05D008467 5.8e-43 177.6 113 69.9
FAN14G5422 Fragaria x ananassa HOM05D006366 ORTHO05D008467 5.8e-43 177.6 104 75.0
ECA246G1127 Erigeron canadensis HOM05D006366 ORTHO05D008467 2.9e-42 175.3 96 81.2
Peaxi162Scf01158g00018 Petunia axillaris HOM05D006366 ORTHO05D008467 2.9e-42 175.3 99 78.8
SEGI_23922 Sequoiadendron giganteum HOM05D006366 ORTHO05D008467 4.9e-42 174.5 114 68.4
Lj3A1010G53 Lonicera japonica HOM05D006366 ORTHO05D008467 1.1e-41 173.3 128 65.6
Oeu011642.1 Olea europaea HOM05D006366 ORTHO05D008467 7.1e-41 170.6 93 81.7
BcaC08g44258 Brassica carinata HOM05D006366 ORTHO05D008467 1.6e-40 169.5 111 68.5
TPR.G31172 Trifolium pratense HOM05D006366 ORTHO05D008467 8.6e-39 163.7 91 80.2
SHI11338 Sapria himalayana HOM05D006366 ORTHO05D008467 5.8e-35 151.0 107 61.7
SMO367G0820 Selaginella moellendorffii HOM05D006366 ORTHO05D008467 9.2e-33 143.7 112 52.7
unitig_0.g1057 Utricularia gibba HOM05D001088 ORTHO05D002099 6.6e-31 137.5 79 74.7
Potri.006G023801 Populus trichocarpa HOM05D006366 ORTHO05D008467 2.6e-27 125.6 81 64.2
Mapoly0115s0059 Marchantia polymorpha HOM05D006366 ORTHO05D008467 3.5e-24 115.2 113 44.2
Pp3c21_2980 Physcomitrium patens HOM05D006366 ORTHO05D008467 2.8e-21 105.5 112 41.1
Pp3c18_20590 Physcomitrium patens HOM05D006366 ORTHO05D008467 3.6e-21 105.1 112 42.0
FvH4_6g40100 Fragaria vesca HOM05D006366 ORTHO05D008467 4.8e-21 104.8 59 83.1
CBR_g19221 Chara braunii HOM05D006366 ORTHO05D008467 6.9e-20 100.9 114 42.1
Haze_18340 Corylus avellana HOM05D006366 ORTHO05D008467 3.4e-19 98.6 60 66.7
PRCOL_00003273 Prasinoderma coloniale HOM05D006366 ORTHO05D008467 1.8e-15 86.3 114 39.5
MCO15G416 Micromonas commoda HOM05D006366 ORTHO05D008467 1.6e-13 79.7 113 38.9
Aqoxy2G02028 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.2e-09 65.1 54 57.4


User provided reference genes

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