Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012811 Camellia sinensis var. sinensis HOM05D005407 ORTHO05D006544 4.8e-151 538.1 337 100.0
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 3.7e-42 176.4 382 37.2
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 7.2e-38 162.2 363 38.6
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 1.1e-33 148.3 377 36.9
Dinv30062 Davidia involucrata HOM05D005407 ORTHO05D006544 1.2e-29 134.8 314 45.9
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 2.0e-27 127.5 352 33.2
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 3.3e-27 126.7 377 34.7
Actinidia32821 Actinidia chinensis HOM05D005407 ORTHO05D006544 1.6e-24 117.9 203 46.3
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.6e-24 117.1 370 32.7
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 4.5e-24 116.3 363 30.6
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 5.9e-24 115.9 400 36.0
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 1.7e-23 114.4 219 44.7
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 2.2e-23 114.0 384 31.5
Thecc.01G067900 Theobroma cacao HOM05D005407 ORTHO05D006544 2.2e-23 114.0 403 36.7
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 2.9e-23 113.6 360 33.9
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 8.5e-23 112.1 360 33.6
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 1.9e-22 110.9 406 30.0
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 1.9e-22 110.9 411 28.5
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 3.6e-21 106.7 370 31.6
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 4.7e-21 106.3 213 53.5
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 6.1e-21 105.9 225 44.9
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.4e-20 104.8 376 31.1
CiPaw.02G004700 Carya illinoinensis HOM05D005407 ORTHO05D006544 6.7e-20 102.4 394 31.2
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 8.8e-20 102.1 225 43.6
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 1.5e-19 101.3 190 48.9
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 1.5e-19 101.3 348 32.2
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 2.0e-19 100.9 210 41.0
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 2.6e-19 100.5 339 31.6
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 3.3e-19 100.1 369 33.3
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 3.3e-19 100.1 390 28.2
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 1.3e-18 98.2 394 27.4
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 1.3e-18 98.2 408 28.9
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 1.3e-18 98.2 357 29.4
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 1.1e-17 95.1 376 36.7
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 1.1e-17 95.1 320 31.6
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 1.1e-17 95.1 320 31.6
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 1.4e-17 94.7 395 27.3
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 4.1e-17 93.2 256 35.2
Phvul.002G013600 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 7.0e-17 92.4 356 37.6
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.2e-16 91.7 386 29.8
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.2e-16 91.7 386 30.6
Sabra07G0045500 Salix brachista HOM05D005407 ORTHO05D006544 1.2e-16 91.7 377 30.0
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 1.6e-16 91.3 355 28.7
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 2.7e-16 90.5 363 32.2
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 2.7e-16 90.5 361 30.2
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 3.5e-16 90.1 236 38.1
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 4.5e-16 89.7 386 30.1
vmacro17985 Vaccinium macrocarpon HOM05D005407 ORTHO05D006544 1.3e-15 88.2 151 45.7
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 1.7e-15 87.8 215 35.3
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 2.2e-15 87.4 345 28.7
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 2.9e-15 87.0 391 28.4
VMungo1215G1030 Vigna mungo HOM05D005407 ORTHO05D006544 2.9e-15 87.0 345 36.8
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 5.0e-15 86.3 351 30.2
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 6.5e-15 85.9 340 29.1
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 1.5e-14 84.7 361 30.2
PSO675G4008 Papaver somniferum HOM05D005407 ORTHO05D006544 2.5e-14 84.0 401 26.7
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 3.2e-14 83.6 348 31.0
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 3.2e-14 83.6 367 26.2
Medtr4g095320 Medicago truncatula HOM05D005407 ORTHO05D006544 7.2e-14 82.4 386 35.8
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 9.4e-14 82.0 200 32.5
PSO541G0358 Papaver somniferum HOM05D005407 ORTHO05D006544 9.4e-14 82.0 355 37.7
Glyma.01G191400 Glycine max HOM05D005407 ORTHO05D006544 1.6e-13 81.3 350 35.1
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 2.7e-13 80.5 201 31.8
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 2.7e-13 80.5 200 29.0
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.4e-12 78.2 200 29.0
Manes.12G112400 Manihot esculenta HOM05D005407 ORTHO05D006544 1.4e-12 78.2 232 47.8
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 4.0e-12 76.6 366 32.0
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea HOM05D005407 ORTHO05D006544 5.2e-12 76.3 350 29.4
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 8.8e-12 75.5 218 38.1
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 1.2e-11 75.1 244 35.7
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 1.2e-11 75.1 350 31.1
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea HOM05D005407 ORTHO05D006544 2.0e-11 74.3 350 28.9
unitig_62.g23420 Utricularia gibba HOM05D005407 ORTHO05D006544 2.0e-11 74.3 184 33.2
Peaxi162Scf00365g00076 Petunia axillaris HOM05D005407 ORTHO05D006544 2.6e-11 73.9 191 35.6
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 4.4e-11 73.2 224 34.8
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 7.5e-11 72.4 214 35.5
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 1.7e-10 71.2 362 27.1
Phvul.003G237500 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 1.7e-10 71.2 387 33.3
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 2.2e-10 70.9 345 26.7
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 2.2e-10 70.9 339 34.8
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 3.7e-10 70.1 228 40.8
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 3.7e-10 70.1 194 46.9
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 3.7e-10 70.1 368 30.7
MELO3C020864.2 Cucumis melo HOM05D005407 ORTHO05D006544 4.8e-10 69.7 182 49.5
Rhsim08G0096100 Rhododendron simsii HOM05D005407 ORTHO05D006544 4.8e-10 69.7 147 50.3
Lj2g0008966 Lotus japonicus HOM05D005407 ORTHO05D006544 6.3e-10 69.3 118 44.9
Prupe.6G224800 Prunus persica HOM05D005407 ORTHO05D006544 6.3e-10 69.3 248 36.7
DCAR_021471 Daucus carota HOM05D005407 ORTHO05D006544 1.1e-09 68.6 217 28.6
CsaV3_2G016540 Cucumis sativus L. HOM05D005407 ORTHO05D006544 1.8e-09 67.8 315 36.8
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 1.8e-09 67.8 360 28.9
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 3.1e-09 67.0 345 34.2
BraA09t36591Z Brassica rapa HOM05D005407 ORTHO05D006544 4.1e-09 66.6 219 33.8
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 5.4e-09 66.2 170 47.6
FvH4_1g17130 Fragaria vesca HOM05D005407 ORTHO05D006544 7.0e-09 65.9 345 34.2
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.2e-08 65.1 345 34.2
Migut.H00374 Erythranthe guttata HOM05D005407 ORTHO05D006544 1.6e-08 64.7 100 48.0
THA.LOC104827519 Tarenaya hassleriana HOM05D005407 ORTHO05D006544 1.6e-08 64.7 361 27.7
TAR376G1145 Trochodendron aralioides HOM05D005407 ORTHO05D006544 2.0e-08 64.3 259 38.6
unitig_52.g17607 Utricularia gibba HOM05D005407 ORTHO05D006544 2.0e-08 64.3 190 31.6
AL8G43980 Arabidopsis lyrata HOM05D005407 ORTHO05D006544 2.7e-08 63.9 78 50.0
EL10Ac6g15663 Beta vulgaris HOM05D005407 ORTHO05D006544 3.5e-08 63.5 223 36.8
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 3.5e-08 63.5 216 31.9
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 3.5e-08 63.5 216 31.9
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 3.5e-08 63.5 216 31.9
Lalb_Chr16g0389101 Lupinus albus HOM05D005407 ORTHO05D006544 4.5e-08 63.2 210 29.5
RcHm_v2.0_Chr2g0107301 Rosa chinensis HOM05D005407 ORTHO05D006544 5.9e-08 62.8 219 37.4
C09p11100 Brassica napus HOM05D005407 ORTHO05D006544 1.0e-07 62.0 204 30.9
Carub.0008s2714 Capsella rubella HOM05D005407 ORTHO05D006544 1.3e-07 61.6 181 30.4
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 1.7e-07 61.2 208 27.9
BolC9t53999H Brassica oleracea HOM05D005407 ORTHO05D006544 2.2e-07 60.8 204 30.9
CDE04G2817 Ceratophyllum demersum HOM05D005407 ORTHO05D006544 2.9e-07 60.5 207 28.5
ClCG02G012410 Citrullus lanatus HOM05D005407 ORTHO05D006544 2.9e-07 60.5 209 46.4
HanXRQChr11g0322471 Helianthus annuus HOM05D005407 ORTHO05D006544 2.9e-07 60.5 77 44.2
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 8.5e-07 58.9 338 32.5
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 8.5e-07 58.9 202 29.2
MD02G1181700 Malus domestica HOM05D005407 ORTHO05D006544 1.1e-06 58.5 211 36.0
Sed0011473 Sechium edule HOM05D005407 ORTHO05D006544 2.5e-06 57.4 206 33.5
Nitab4.5_0005127g0050 Nicotiana tabacum HOM05D005407 ORTHO05D006544 4.2e-06 56.6 83 42.2
SEGI_38417 Sequoiadendron giganteum HOM05D019616 ORTHO05D023140 5.5e-06 56.2 111 36.9
AT5G67350 Arabidopsis thaliana HOM05D005407 ORTHO05D006544 7.2e-06 55.8 180 31.1
CARHR280260 Cardamine hirsuta HOM05D005407 ORTHO05D006544 7.2e-06 55.8 176 29.5
HanXRQChr12g0377191 Helianthus annuus HOM05D005407 ORTHO05D006544 7.2e-06 55.8 84 44.0


User provided reference genes

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