Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012807 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 4.4e-144 514.6 262 100.0
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.2e-37 161.0 245 48.2
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 1.3e-31 141.0 249 43.0
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 1.3e-31 141.0 249 43.0
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 2.7e-24 116.7 246 36.2
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.0e-23 114.8 228 37.7
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 9.6e-22 108.2 232 37.5
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 9.6e-22 108.2 179 43.6
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 9.6e-22 108.2 174 40.8
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 1.4e-20 104.4 175 38.9
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 9.9e-19 98.2 192 37.5
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 2.2e-18 97.1 237 37.1
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 3.8e-18 96.3 232 37.1
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 8.4e-18 95.1 207 37.2
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 1.4e-17 94.4 162 40.1
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 4.2e-17 92.8 171 34.5
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 4.2e-17 92.8 196 37.2
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 5.4e-17 92.4 191 38.2
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 5.4e-17 92.4 241 32.8
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 7.1e-17 92.0 226 33.6
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 9.3e-17 91.7 176 38.1
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 9.3e-17 91.7 196 36.7
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 2.1e-16 90.5 204 35.8
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 4.6e-16 89.4 211 34.1
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 7.8e-16 88.6 188 36.2
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.7e-15 87.4 148 44.6
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 2.3e-15 87.0 247 32.0
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 3.0e-15 86.7 221 35.3
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 5.1e-15 85.9 172 38.4
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 5.1e-15 85.9 236 33.1
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 2.5e-14 83.6 179 33.0
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 3.3e-14 83.2 214 33.6
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 5.6e-14 82.4 170 35.3
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 2.8e-13 80.1 189 36.5
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 2.8e-13 80.1 176 35.2
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 3.6e-13 79.7 177 33.9
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 3.6e-13 79.7 169 37.3
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 6.2e-13 79.0 175 35.4
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 1.8e-12 77.4 234 33.3
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 2.4e-12 77.0 186 34.9
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 3.1e-12 76.6 188 34.6
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.6e-11 73.6 190 35.3
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 3.4e-11 73.2 165 37.6
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 4.4e-11 72.8 188 33.5
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 5.8e-11 72.4 177 31.6
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 7.6e-11 72.0 170 34.1
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 1.7e-10 70.9 188 33.0
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.2e-10 70.5 122 42.6
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 3.8e-10 69.7 172 29.1
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 3.8e-10 69.7 77 51.9
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 4.9e-10 69.3 206 34.5
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 8.4e-10 68.6 213 32.4
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.1e-09 68.2 63 57.1
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 3.2e-09 66.6 170 30.6
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 1.2e-08 64.7 163 34.4
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.6e-08 64.3 230 30.9
Migut.J01365 Erythranthe guttata HOM05D003426 ORTHO05D003816 2.1e-08 63.9 198 28.8
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 2.1e-08 63.9 74 48.6
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 2.1e-08 63.9 68 52.9
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 2.7e-08 63.5 59 57.6
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 3.5e-08 63.2 229 31.0
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 6.0e-08 62.4 200 29.0
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 7.8e-08 62.0 234 32.1
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 7.8e-08 62.0 78 44.9
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 7.8e-08 62.0 217 28.6
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 1.0e-07 61.6 78 46.2
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 1.0e-07 61.6 78 46.2
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 1.0e-07 61.6 66 50.0
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 1.3e-07 61.2 90 41.1
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.7e-07 60.8 206 28.6
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 1.7e-07 60.8 75 46.7
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 3.9e-07 59.7 248 27.8
PGSC0003DMG400038550 Solanum tuberosum HOM05D003426 ORTHO05D003816 3.9e-07 59.7 75 42.7
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 8.7e-07 58.5 179 31.8
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 8.7e-07 58.5 109 38.5
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 8.7e-07 58.5 77 41.6
PGSC0003DMG400043134 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.5e-06 57.8 63 44.4
SGA_v2.0_scaffold12G06013 Striga asiatica HOM05D003426 ORTHO05D003816 1.9e-06 57.4 56 44.6
SGA_v2.0_scaffold1435G53950 Striga asiatica HOM05D003426 ORTHO05D003816 1.9e-06 57.4 56 44.6
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 2.5e-06 57.0 153 33.3
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 3.3e-06 56.6 159 34.6
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 7.3e-06 55.5 175 32.6
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 9.6e-06 55.1 174 29.3


User provided reference genes

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