Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 2.0e-39 165.2 80 100.0
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 2.5e-26 121.7 80 81.2
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 2.2e-25 118.6 80 78.8
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 6.3e-25 117.1 80 77.5
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 2.6e-23 111.7 77 77.9
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 5.9e-23 110.5 77 76.6
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 3.6e-20 101.3 77 68.8
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 7.9e-20 100.1 77 67.5
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 1.0e-19 99.8 77 67.5
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 1.8e-19 99.0 77 67.5
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 1.8e-19 99.0 77 67.5
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 1.8e-19 99.0 77 67.5
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 1.8e-19 99.0 77 67.5
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 1.8e-19 99.0 77 68.8
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 2.3e-19 98.6 77 66.2
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 2.3e-19 98.6 77 66.2
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 3.0e-19 98.2 77 67.5
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 3.0e-19 98.2 77 66.2
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 3.9e-19 97.8 77 67.5
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 3.9e-19 97.8 77 66.2
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 3.9e-19 97.8 75 66.7
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 3.9e-19 97.8 76 67.1
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 3.9e-19 97.8 76 67.1
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 3.9e-19 97.8 76 67.1
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 3.9e-19 97.8 77 64.9
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 3.9e-19 97.8 77 67.5
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 3.9e-19 97.8 77 66.2
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 5.1e-19 97.4 77 66.2
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 5.1e-19 97.4 77 66.2
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 5.1e-19 97.4 77 67.5
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 5.1e-19 97.4 77 66.2
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 5.1e-19 97.4 76 65.8
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 5.1e-19 97.4 77 67.5
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 5.1e-19 97.4 77 66.2
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 6.7e-19 97.1 77 64.9
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 6.7e-19 97.1 77 63.6
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 6.7e-19 97.1 77 63.6
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 6.7e-19 97.1 77 66.2
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 6.7e-19 97.1 77 66.2
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 6.7e-19 97.1 77 66.2
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 6.7e-19 97.1 77 66.2
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 6.7e-19 97.1 77 66.2
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 6.7e-19 97.1 77 64.9
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 6.7e-19 97.1 77 64.9
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 6.7e-19 97.1 76 67.1
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 8.8e-19 96.7 77 64.9
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 8.8e-19 96.7 77 64.9
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 8.8e-19 96.7 77 64.9
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 8.8e-19 96.7 77 64.9
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 8.8e-19 96.7 76 65.8
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 8.8e-19 96.7 76 67.1
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 1.1e-18 96.3 77 63.6
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 1.1e-18 96.3 77 63.6
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 1.1e-18 96.3 77 64.9
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 1.5e-18 95.9 77 66.2
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 1.5e-18 95.9 77 64.9
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 1.5e-18 95.9 77 66.2
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 2.0e-18 95.5 77 63.6
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 2.0e-18 95.5 77 63.6
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 2.0e-18 95.5 77 63.6
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 2.0e-18 95.5 77 64.9
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 2.0e-18 95.5 77 63.6
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 2.0e-18 95.5 77 64.9
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 2.0e-18 95.5 77 64.9
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 2.0e-18 95.5 77 62.3
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 2.0e-18 95.5 77 64.9
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 2.0e-18 95.5 77 64.9
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 2.0e-18 95.5 77 64.9
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 2.6e-18 95.1 77 66.2
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 2.6e-18 95.1 77 63.6
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 2.6e-18 95.1 77 62.3
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 2.6e-18 95.1 77 64.9
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 3.3e-18 94.7 76 64.5
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 4.4e-18 94.4 77 62.3
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 4.4e-18 94.4 77 62.3
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 4.4e-18 94.4 77 64.9
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 4.4e-18 94.4 77 64.9
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 4.4e-18 94.4 76 64.5
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 4.4e-18 94.4 77 66.2
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 4.4e-18 94.4 76 64.5
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 5.7e-18 94.0 77 63.6
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 5.7e-18 94.0 77 62.3
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 5.7e-18 94.0 76 64.5
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 5.7e-18 94.0 77 64.9
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 5.7e-18 94.0 77 61.0
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 7.4e-18 93.6 77 62.3
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 9.7e-18 93.2 77 61.0
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 9.7e-18 93.2 77 59.7
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 9.7e-18 93.2 77 62.3
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 1.3e-17 92.8 76 63.2
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 1.3e-17 92.8 77 63.6
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 1.3e-17 92.8 77 63.6
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 1.7e-17 92.4 77 63.6
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 1.7e-17 92.4 77 61.0
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 1.7e-17 92.4 77 59.7
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 1.7e-17 92.4 77 61.0
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 1.7e-17 92.4 76 63.2
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 1.7e-17 92.4 77 63.6
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 1.7e-17 92.4 77 63.6
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 1.7e-17 92.4 77 61.0
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 1.7e-17 92.4 77 64.9
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 2.2e-17 92.0 77 61.0
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 2.2e-17 92.0 77 59.7
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 2.8e-17 91.7 77 61.0
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.8e-17 91.7 77 62.3
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 3.7e-17 91.3 77 61.0
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 3.7e-17 91.3 77 63.6
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 3.7e-17 91.3 77 62.3
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 3.7e-17 91.3 77 61.0
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 3.7e-17 91.3 77 59.7
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 4.8e-17 90.9 77 61.0
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 4.8e-17 90.9 77 61.0
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 4.8e-17 90.9 77 63.6
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 4.8e-17 90.9 77 59.7
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 6.3e-17 90.5 77 59.7
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 8.2e-17 90.1 77 59.7
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 1.8e-16 89.0 77 61.0
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 1.8e-16 89.0 77 61.0
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.8e-16 89.0 77 61.0
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.8e-16 89.0 77 61.0
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.8e-16 89.0 77 61.0
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.8e-16 89.0 77 61.0
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.8e-16 89.0 77 61.0
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 2.4e-16 88.6 77 58.4
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 3.1e-16 88.2 76 59.2
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 3.1e-16 88.2 76 59.2
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.1e-16 88.2 75 61.3
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 3.1e-16 88.2 77 62.3
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 3.1e-16 88.2 77 62.3
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 4.1e-16 87.8 77 55.8
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 4.1e-16 87.8 77 59.7
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 7.0e-16 87.0 76 57.9
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 7.0e-16 87.0 77 58.4
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 1.2e-15 86.3 77 59.7
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 1.6e-15 85.9 77 58.4
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 2.0e-15 85.5 77 59.7
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 2.0e-15 85.5 76 53.9
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 3.5e-15 84.7 76 59.2
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 4.5e-15 84.3 77 53.2
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 5.9e-15 84.0 77 51.9
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 1.0e-14 83.2 77 53.2
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 1.0e-14 83.2 77 59.7
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 1.0e-14 83.2 77 59.7
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 6.5e-14 80.5 75 57.3
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 8.5e-14 80.1 77 51.9
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 1.1e-13 79.7 76 53.9
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 1.1e-13 79.7 77 53.2
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 1.5e-13 79.3 77 53.2
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 1.2e-12 76.3 77 49.4
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 4.7e-12 74.3 43 74.4
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 5.2e-11 70.9 77 46.8
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 2.0e-10 68.9 77 45.5
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 2.2e-09 65.5 70 51.4
Zm00001eb170120 Zea mays HOM05D000137 ORTHO05D014725 6.5e-06 53.9 40 60.0
Zm00001eb388940 Zea mays HOM05D004043 ORTHO05D002193 6.5e-06 53.9 40 60.0


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