Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 7.2e-72 273.9 144 100.0
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 6.8e-30 134.4 142 52.8
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 6.4e-28 127.9 127 56.7
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 1.9e-24 116.3 127 50.4
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 5.6e-24 114.8 126 54.8
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 4.4e-21 105.1 139 46.0
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 4.4e-21 105.1 132 47.0
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 4.4e-21 105.1 138 41.3
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 6.4e-20 101.3 111 49.5
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 1.1e-19 100.5 118 55.1
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 1.1e-19 100.5 123 40.7
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 9.3e-19 97.4 128 40.6
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 2.7e-18 95.9 143 43.4
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 4.6e-18 95.1 137 42.3
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.0e-17 94.0 122 42.6
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 1.0e-17 94.0 130 40.0
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.3e-17 93.6 116 43.1
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 1.7e-17 93.2 133 43.6
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.7e-17 93.2 142 42.3
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 5.1e-17 91.7 134 35.8
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 3.3e-16 89.0 126 38.9
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 3.3e-16 89.0 134 45.5
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 5.6e-16 88.2 137 37.2
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 5.6e-16 88.2 123 39.0
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 7.3e-16 87.8 134 37.3
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 7.3e-16 87.8 129 38.0
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 9.6e-16 87.4 121 40.5
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 1.3e-15 87.0 132 38.6
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 1.6e-15 86.7 120 46.7
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 6.2e-15 84.7 135 35.6
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 6.2e-15 84.7 121 38.8
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 6.2e-15 84.7 121 38.0
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 6.2e-15 84.7 133 40.6
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 1.1e-14 84.0 124 41.1
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.1e-14 84.0 121 37.2
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 1.1e-14 84.0 126 38.9
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.4e-14 83.6 130 35.4
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.4e-14 83.6 121 37.2
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.8e-14 83.2 109 40.4
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 3.1e-14 82.4 134 35.1
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 3.1e-14 82.4 141 38.3
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 3.1e-14 82.4 133 39.1
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 4.0e-14 82.0 130 40.8
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 4.0e-14 82.0 131 35.9
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 4.0e-14 82.0 144 34.0
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 5.3e-14 81.6 131 35.1
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 5.3e-14 81.6 130 40.0
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 9.0e-14 80.9 114 36.8
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 9.0e-14 80.9 128 38.3
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.2e-13 80.5 127 36.2
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.5e-13 80.1 129 40.3
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.5e-13 80.1 127 33.9
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 2.0e-13 79.7 129 40.3
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 2.0e-13 79.7 127 37.8
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 2.6e-13 79.3 123 35.8
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 2.6e-13 79.3 135 33.3
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 2.6e-13 79.3 137 36.5
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 2.6e-13 79.3 118 36.4
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.6e-13 79.3 127 43.3
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 3.4e-13 79.0 128 38.3
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 3.4e-13 79.0 127 38.6
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 7.6e-13 77.8 126 34.1
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 7.6e-13 77.8 132 39.4
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 7.6e-13 77.8 137 39.4
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 7.6e-13 77.8 115 42.6
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 7.6e-13 77.8 137 36.5
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 9.9e-13 77.4 124 37.9
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 9.9e-13 77.4 124 38.7
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.7e-12 76.6 123 39.0
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 2.9e-12 75.9 134 36.6
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 4.9e-12 75.1 95 41.1
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 6.4e-12 74.7 126 34.9
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 6.4e-12 74.7 124 33.1
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 8.4e-12 74.3 125 33.6
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 8.4e-12 74.3 125 40.8
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 1.4e-11 73.6 130 36.9
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.4e-11 72.8 114 38.6
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 3.2e-11 72.4 126 34.1
PGSC0003DMG400021122 Solanum tuberosum HOM05D005932 ORTHO05D006213 5.4e-11 71.6 134 35.8
EL10Ac9g21553 Beta vulgaris HOM05D026734 ORTHO05D006213 7.1e-11 71.2 114 38.6
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 2.1e-10 69.7 126 34.1
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 2.7e-10 69.3 138 40.6
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 6.0e-10 68.2 138 30.4
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 7.9e-10 67.8 124 32.3
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 7.9e-10 67.8 133 33.8
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 1.0e-09 67.4 123 32.5
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 1.0e-09 67.4 124 33.1
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 1.3e-09 67.0 120 38.3
FAN25G3656 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.3e-09 67.0 105 36.2
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.3e-09 67.0 128 36.7
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 1.8e-09 66.6 135 34.8
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 5.1e-09 65.1 121 35.5
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 5.1e-09 65.1 116 37.9
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.1e-08 63.9 98 39.8
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 1.5e-08 63.5 120 33.3
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 1.5e-08 63.5 120 33.3
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 1.5e-08 63.5 120 33.3
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.9e-08 63.2 116 39.7
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 1.9e-08 63.2 131 37.4
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 2.5e-08 62.8 128 39.8
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 3.3e-08 62.4 120 36.7
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 4.3e-08 62.0 125 32.8
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 4.3e-08 62.0 115 35.7
FAN16G0402 Fragaria x ananassa HOM05D005932 ORTHO05D006213 5.6e-08 61.6 127 29.9
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 9.6e-08 60.8 136 33.1
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 9.6e-08 60.8 108 34.3
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 1.3e-07 60.5 128 30.5
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 1.3e-07 60.5 128 32.0
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 1.6e-07 60.1 136 29.4
Sp1g26360 Schrenkiella parvula HOM05D012212 ORTHO05D006213 8.1e-07 57.8 131 32.1
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 1.8e-06 56.6 137 38.0


User provided reference genes

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