Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 7.9e-255 883.2 435 100.0
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 2.5e-232 808.5 400 99.5
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 3.7e-196 688.3 440 77.7
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 6.1e-191 671.0 444 76.1
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 2.4e-187 659.1 444 74.8
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 4.9e-180 634.8 438 71.5
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 1.5e-176 623.2 435 68.5
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 1.9e-176 622.9 436 69.5
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 5.6e-176 621.3 438 69.2
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 9.5e-176 620.5 436 70.9
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 2.1e-175 619.4 436 68.8
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 4.0e-174 615.1 434 69.1
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 2.0e-173 612.8 438 70.5
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 4.4e-173 611.7 443 68.6
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 2.2e-172 609.4 439 69.2
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 8.3e-172 607.4 435 69.2
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 1.4e-171 606.7 428 68.7
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 1.2e-170 603.6 426 69.2
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 2.7e-170 602.4 436 69.0
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 8.6e-169 597.4 436 66.1
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 1.5e-168 596.7 436 66.1
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 4.3e-168 595.1 436 65.6
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 4.7e-167 591.7 441 65.1
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 1.8e-166 589.7 443 65.7
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 4.0e-166 588.6 443 67.0
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.2e-165 587.0 435 67.8
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.5e-165 586.6 434 67.7
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 1.3e-164 583.6 441 63.0
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 1.7e-164 583.2 442 67.0
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 1.1e-163 580.5 405 67.9
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 1.4e-163 580.1 437 66.8
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 4.1e-163 578.6 436 63.3
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 7.1e-163 577.8 431 65.4
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 7.1e-163 577.8 442 63.3
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 9.2e-163 577.4 438 63.2
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 9.2e-163 577.4 436 66.3
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 9.2e-163 577.4 373 72.4
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 9.2e-163 577.4 430 67.9
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 2.7e-162 575.9 432 63.9
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 6.0e-162 574.7 431 63.3
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 7.8e-162 574.3 392 69.4
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 1.0e-161 573.9 443 64.3
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 1.7e-161 573.2 435 65.1
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 3.0e-161 572.4 426 68.1
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 6.6e-161 571.2 402 66.9
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 1.9e-160 569.7 449 63.9
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.9e-160 569.7 397 71.0
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 4.3e-160 568.5 433 64.9
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 5.6e-160 568.2 440 63.4
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 3.6e-159 565.5 430 62.3
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 4.7e-159 565.1 363 73.6
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 6.2e-159 564.7 421 64.6
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 8.1e-159 564.3 439 63.3
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 1.1e-158 563.9 436 62.6
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 4.0e-158 562.0 442 63.8
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 5.2e-158 561.6 427 64.9
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 1.2e-157 560.5 427 64.4
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 1.5e-157 560.1 437 62.5
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 2.0e-157 559.7 428 63.3
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 2.6e-157 559.3 427 63.7
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 3.4e-157 558.9 464 61.2
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 4.4e-157 558.5 435 62.3
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 7.6e-157 557.8 359 71.3
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 1.3e-156 557.0 444 62.8
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 2.2e-156 556.2 427 64.2
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 2.9e-156 555.8 432 63.9
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 6.4e-156 554.7 394 67.0
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 1.1e-155 553.9 444 63.1
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 1.9e-155 553.1 437 64.1
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 7.1e-155 551.2 361 71.5
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 7.1e-155 551.2 361 71.2
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 7.1e-155 551.2 437 62.5
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 1.2e-154 550.4 427 63.2
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 1.2e-154 550.4 432 62.3
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 7.8e-154 547.7 448 61.6
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 8.7e-153 544.3 449 60.6
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 1.9e-152 543.1 425 62.6
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 1.3e-151 540.4 394 66.5
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 3.1e-150 535.8 383 67.9
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 4.0e-150 535.4 434 61.8
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 1.5e-149 533.5 471 57.3
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 4.4e-149 531.9 321 76.9
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 7.1e-147 524.6 393 66.2
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 2.1e-146 523.1 474 57.6
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 3.5e-146 522.3 528 52.1
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 1.3e-145 520.4 401 65.1
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 5.1e-145 518.5 389 66.1
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 1.3e-143 513.8 437 60.2
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 5.3e-142 508.4 321 75.1
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 3.2e-139 499.2 348 67.2
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 1.1e-136 490.7 400 59.5
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 3.2e-131 472.6 430 55.3
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 2.5e-128 463.0 429 55.7
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 6.2e-127 458.4 437 56.5
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 3.1e-126 456.1 353 65.7
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 1.1e-115 421.0 285 75.1
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 1.7e-103 380.6 253 69.6
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 8.2e-103 378.3 364 48.6
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 1.5e-101 374.0 331 55.9
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 1.4e-89 334.3 340 49.1
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 1.8e-86 323.9 406 41.6
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 9.4e-83 311.6 435 43.4
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 2.1e-82 310.5 334 48.5
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 2.1e-82 310.5 335 48.7
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 1.6e-77 294.3 231 62.8
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 1.1e-75 288.1 409 39.6
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 7.0e-62 242.3 371 34.8
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 6.0e-53 212.6 183 58.5
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 4.3e-43 179.9 129 64.3
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 4.4e-40 169.9 120 67.5
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 2.2e-31 141.0 135 53.3
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 1.1e-17 95.5 59 72.9
Nitab4.5_0015177g0020 Nicotiana tabacum HOM05D001772 ORTHO05D008903 4.9e-15 86.7 50 70.0
Zm00001eb098470 Zea mays HOM05D001772 ORTHO05D008903 2.2e-07 61.2 52 57.7


User provided reference genes

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