Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012701 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 5.4e-199 697.6 382 100.0
CSS0044227 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 3.8e-168 595.1 408 84.6
Nn7g36315 Nelumbo nucifera HOM05D004797 ORTHO05D005752 1.2e-121 440.7 346 65.3
GSVIVG01025234001 Vitis vinifera HOM05D004797 ORTHO05D005752 1.2e-121 440.7 279 74.2
TAR633G1546 Trochodendron aralioides HOM05D004797 ORTHO05D005752 8.5e-120 434.5 279 73.5
Rhsim01G0192400 Rhododendron simsii HOM05D004797 ORTHO05D005752 2.5e-119 433.0 380 61.1
Gohir.A09G112900 Gossypium hirsutum HOM05D004797 ORTHO05D005752 3.2e-119 432.6 279 72.8
Manes.14G004000 Manihot esculenta HOM05D004797 ORTHO05D005752 9.4e-119 431.0 279 72.8
Gohir.D09G109400 Gossypium hirsutum HOM05D004797 ORTHO05D005752 1.6e-118 430.3 279 72.8
Gorai.006G127000 Gossypium raimondii HOM05D004797 ORTHO05D005752 1.6e-118 430.3 279 72.8
CANSAT54G0946 Cannabis sativa HOM05D004797 ORTHO05D005752 4.7e-118 428.7 277 71.8
Atru.chr3.2667 Acer truncatum HOM05D004797 ORTHO05D005752 6.1e-118 428.3 279 71.3
Ciclev10014796m.g Citrus clementina HOM05D004797 ORTHO05D005752 6.1e-118 428.3 279 71.7
Dinv36236 Davidia involucrata HOM05D004797 ORTHO05D005752 1.0e-117 427.6 272 74.3
Eucgr.J00747 Eucalyptus grandis HOM05D004797 ORTHO05D005752 1.0e-117 427.6 281 71.2
Cpa.g.sc84.33 Carica papaya HOM05D004797 ORTHO05D005752 1.4e-117 427.2 276 72.1
Nn2g15211 Nelumbo nucifera HOM05D004797 ORTHO05D005752 1.4e-117 427.2 338 64.2
Dinv22162 Davidia involucrata HOM05D004797 ORTHO05D005752 2.3e-117 426.4 411 56.4
Potri.009G051400 Populus trichocarpa HOM05D004797 ORTHO05D005752 5.1e-117 425.2 279 71.7
Thecc.09G237700 Theobroma cacao HOM05D004797 ORTHO05D005752 1.5e-116 423.7 279 72.0
Potri.001G256000 Populus trichocarpa HOM05D004797 ORTHO05D005752 2.6e-116 422.9 279 70.6
COL.COLO4_28767 Corchorus olitorius HOM05D004797 ORTHO05D005752 3.3e-116 422.5 277 72.6
Duzib170G0427 Durio zibethinus HOM05D004797 ORTHO05D005752 7.4e-116 421.4 277 71.5
CiPaw.14G117300 Carya illinoinensis HOM05D004797 ORTHO05D005752 1.3e-115 420.6 279 71.3
Actinidia16344 Actinidia chinensis HOM05D004797 ORTHO05D005752 1.7e-115 420.2 260 75.8
Peaxi162Scf00004g00318 Petunia axillaris HOM05D004797 ORTHO05D005752 2.2e-115 419.9 277 70.8
Actinidia11672 Actinidia chinensis HOM05D004797 ORTHO05D005752 2.8e-115 419.5 271 72.3
THA.LOC104817914 Tarenaya hassleriana HOM05D004797 ORTHO05D005752 6.3e-115 418.3 277 70.4
Glyma.12G020200 Glycine max HOM05D004797 ORTHO05D005752 1.4e-114 417.2 262 73.7
RcHm_v2.0_Chr5g0052831 Rosa chinensis HOM05D004797 ORTHO05D005752 1.8e-114 416.8 303 65.0
TAR623G0783 Trochodendron aralioides HOM05D004797 ORTHO05D005752 1.8e-114 416.8 279 71.0
Lsat_1_v5_gn_1_77340 Lactuca sativa HOM05D004797 ORTHO05D005752 2.4e-114 416.4 273 71.8
Prupe.4G254200 Prunus persica HOM05D004797 ORTHO05D005752 3.1e-114 416.0 264 73.5
arahy.Tifrunner.gnm1.ann1.BIMS8G Arachis hypogaea HOM05D004797 ORTHO05D005752 2.0e-113 413.3 262 72.9
arahy.Tifrunner.gnm1.ann1.IKU8UZ Arachis hypogaea HOM05D004797 ORTHO05D005752 2.0e-113 413.3 262 72.9
SGA_v2.0_scaffold42G16076 Striga asiatica HOM05D004797 ORTHO05D005752 2.0e-113 413.3 356 60.4
Lalb_Chr03g0024481 Lupinus albus HOM05D004797 ORTHO05D005752 4.5e-113 412.1 262 71.0
EL10Ac4g10215 Beta vulgaris HOM05D004797 ORTHO05D005752 5.9e-113 411.8 263 71.9
MD03G1172400 Malus domestica HOM05D004797 ORTHO05D005752 7.7e-113 411.4 265 72.8
MELO3C015173.2 Cucumis melo HOM05D004797 ORTHO05D005752 1.0e-112 411.0 261 73.6
AUR62000146 Chenopodium quinoa HOM05D004797 ORTHO05D005752 1.7e-112 410.2 350 58.3
AUR62019327 Chenopodium quinoa HOM05D004797 ORTHO05D005752 1.7e-112 410.2 263 71.9
Oeu025884.1 Olea europaea HOM05D004797 ORTHO05D005752 1.7e-112 410.2 271 72.0
ClCG03G013100 Citrullus lanatus HOM05D004797 ORTHO05D005752 2.2e-112 409.8 261 73.2
CsaV3_1G042960 Cucumis sativus L. HOM05D004797 ORTHO05D005752 6.5e-112 408.3 261 72.8
Glyma.11G093700 Glycine max HOM05D004797 ORTHO05D005752 6.5e-112 408.3 262 72.1
MD11G1190300 Malus domestica HOM05D004797 ORTHO05D005752 6.5e-112 408.3 264 72.7
Ah.06g193930 Amaranthus hybridus HOM05D004797 ORTHO05D005752 1.1e-111 407.5 261 72.0
Sabra09G0037500 Salix brachista HOM05D004797 ORTHO05D005752 1.1e-111 407.5 302 65.6
Sed0009811 Sechium edule HOM05D004797 ORTHO05D005752 1.1e-111 407.5 347 61.4
VMungo1127G0838 Vigna mungo HOM05D004797 ORTHO05D005752 1.5e-111 407.1 263 72.2
Hund22004 Selenicereus undatus HOM05D004797 ORTHO05D005752 1.9e-111 406.8 346 60.1
MSTRG.12462 Avicennia marina HOM05D004797 ORTHO05D005752 2.5e-111 406.4 368 57.9
Phvul.011G022800 Phaseolus vulgaris HOM05D004797 ORTHO05D005752 2.5e-111 406.4 269 70.6
TWI60G0872 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 3.2e-111 406.0 357 58.5
vmacro14270 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 3.2e-111 406.0 380 57.4
Nitab4.5_0006617g0070 Nicotiana tabacum HOM05D004797 ORTHO05D005752 5.5e-111 405.2 265 70.2
Solyc11g065370.3 Solanum lycopersicum HOM05D004797 ORTHO05D005752 7.2e-111 404.8 269 69.1
Lj3g0024081 Lotus japonicus HOM05D004797 ORTHO05D005752 1.2e-110 404.1 259 71.8
Nitab4.5_0002451g0050 Nicotiana tabacum HOM05D004797 ORTHO05D005752 1.2e-110 404.1 268 69.8
Hma1.2p1_2280F.1_g318720 Hydrangea macrophylla HOM05D004797 ORTHO05D005752 2.7e-110 402.9 271 70.8
HPP92_012324 Vanilla planifolia HOM05D004797 ORTHO05D005752 2.7e-110 402.9 274 68.6
Aa31LG10G3600 Aethionema arabicum HOM05D004797 ORTHO05D005752 3.6e-110 402.5 323 60.1
Aqoxy2G00222 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 8.0e-110 401.4 351 57.5
TWI32G1158 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 1.0e-109 401.0 361 58.7
Carub.0001s4032 Capsella rubella HOM05D004797 ORTHO05D005752 1.8e-109 400.2 277 66.8
HanXRQChr01g0023561 Helianthus annuus HOM05D004797 ORTHO05D005752 1.8e-109 400.2 256 73.4
Lalb_Chr01g0001051 Lupinus albus HOM05D004797 ORTHO05D005752 2.3e-109 399.8 263 69.6
MSTRG.18441 Avicennia marina HOM05D004797 ORTHO05D005752 3.0e-109 399.4 281 67.3
CAN.G717.4 Capsicum annuum HOM05D004797 ORTHO05D005752 3.0e-109 399.4 263 70.3
DCAR_029965 Daucus carota HOM05D004797 ORTHO05D005752 3.0e-109 399.4 281 67.6
PGSC0003DMG400029996 Solanum tuberosum HOM05D004797 ORTHO05D005752 1.1e-108 397.5 265 69.1
FAN21G1390 Fragaria x ananassa HOM05D004797 ORTHO05D005752 1.5e-108 397.1 281 66.5
Medtr4g076980 Medicago truncatula HOM05D004797 ORTHO05D005752 2.0e-108 396.7 259 69.9
vmacro04134 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 2.6e-108 396.4 388 59.8
FAN11G3886 Fragaria x ananassa HOM05D004797 ORTHO05D005752 3.3e-108 396.0 268 68.3
Sopen11g025150 Solanum pennellii HOM05D004797 ORTHO05D005752 4.4e-108 395.6 265 68.7
Migut.D00622 Erythranthe guttata HOM05D004797 ORTHO05D005752 5.7e-108 395.2 283 66.4
TPR.G13744 Trifolium pratense HOM05D004797 ORTHO05D005752 7.4e-108 394.8 259 69.5
FAN16G3639 Fragaria x ananassa HOM05D004797 ORTHO05D005752 1.7e-107 393.7 281 66.5
Thhalv10011431m.g Eutrema salsugineum HOM05D004797 ORTHO05D005752 2.2e-107 393.3 277 66.1
MBI19_g09239_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 2.2e-107 393.3 281 67.3
AL1G59340 Arabidopsis lyrata HOM05D004797 ORTHO05D005752 2.8e-107 392.9 277 65.7
Sp1g38120 Schrenkiella parvula HOM05D004797 ORTHO05D005752 1.4e-106 390.6 277 65.7
AT1G51450 Arabidopsis thaliana HOM05D004797 ORTHO05D005752 7.0e-106 388.3 277 65.0
ECA248G3299 Erigeron canadensis HOM05D004797 ORTHO05D005752 7.0e-106 388.3 350 57.7
Hund07473 Selenicereus undatus HOM05D004797 ORTHO05D005752 9.1e-106 387.9 360 53.6
BcaB07g33593 Brassica carinata HOM05D004797 ORTHO05D005752 4.5e-105 385.6 268 67.5
CARHR041620 Cardamine hirsuta HOM05D004797 ORTHO05D005752 4.5e-105 385.6 277 63.9
MBI17_g23181_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 2.9e-104 382.9 263 67.7
PSO384G3237 Papaver somniferum HOM05D004797 ORTHO05D005752 2.9e-104 382.9 268 69.4
SalBow8G4383 Salvia bowleyana HOM05D004797 ORTHO05D005752 2.9e-104 382.9 263 68.4
Rhsim13G0218000 Rhododendron simsii HOM05D004797 ORTHO05D005752 5.0e-104 382.1 388 52.8
Lj1A320G11 Lonicera japonica HOM05D004797 ORTHO05D005752 8.5e-104 381.3 240 74.2
Aqoxy1G00230 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 1.9e-103 380.2 311 60.8
C06p06610 Brassica napus HOM05D004797 ORTHO05D005752 1.9e-103 380.2 278 64.7
ATR0733G130 Amborella trichopoda HOM05D004797 ORTHO05D005752 2.5e-103 379.8 315 59.0
PGR142G0717 Punica granatum HOM05D004797 ORTHO05D005752 4.2e-103 379.0 280 66.4
BcaC08g43313 Brassica carinata HOM05D004797 ORTHO05D005752 5.5e-103 378.6 278 64.7
PSO339G1463 Papaver somniferum HOM05D004797 ORTHO05D005752 1.2e-102 377.5 267 68.9
Cfa009790 Carpinus fangiana HOM05D004797 ORTHO05D005752 3.6e-102 375.9 240 72.9
BolC6t35774H Brassica oleracea HOM05D004797 ORTHO05D005752 6.1e-102 375.2 280 64.3
Eucgr.B03708 Eucalyptus grandis HOM05D004797 ORTHO05D005752 8.0e-102 374.8 262 67.9
A06p02480 Brassica napus HOM05D004797 ORTHO05D005752 4.4e-100 369.0 259 67.2
BraA06t23454Z Brassica rapa HOM05D004797 ORTHO05D005752 5.7e-100 368.6 260 66.9
CiPaw.13G156600 Carya illinoinensis HOM05D004797 ORTHO05D005752 5.7e-100 368.6 280 64.6
Migut.N02340 Erythranthe guttata HOM05D004797 ORTHO05D005752 2.4e-98 363.2 268 63.4
PSO339G4480 Papaver somniferum HOM05D004797 ORTHO05D005752 4.5e-97 359.0 260 65.4
Cc01_g04890 Coffea canephora HOM05D004797 ORTHO05D005752 1.0e-93 347.8 194 78.4
HPP92_012392 Vanilla planifolia HOM05D004797 ORTHO05D005752 1.8e-93 347.1 197 76.6
SHI29796 Sapria himalayana HOM05D004797 ORTHO05D005752 2.6e-92 343.2 276 61.2
unitig_27.g24997 Utricularia gibba HOM05D004797 ORTHO05D005752 9.8e-92 341.3 390 47.9
Sc16g0011300 Simmondsia chinensis HOM05D004797 ORTHO05D005752 2.2e-91 340.1 316 56.3
PGR119G1354 Punica granatum HOM05D004797 ORTHO05D005752 7.0e-90 335.1 230 68.3
CiPaw.13G157500 Carya illinoinensis HOM05D004797 ORTHO05D005752 3.8e-88 329.3 260 62.3
SEGI_00529 Sequoiadendron giganteum HOM05D004797 ORTHO05D005752 6.6e-88 328.6 285 57.5
QL01p004191 Quercus lobata HOM05D004797 ORTHO05D005752 1.9e-87 327.0 184 81.0
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 3.5e-81 306.2 322 51.9
Os11g0146500 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 1.5e-79 300.8 296 50.7
Os12g0143200 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 1.2e-78 297.7 347 46.4
Zm00001eb092900 Zea mays HOM05D004797 ORTHO05D005752 8.0e-78 295.0 327 45.6
AagrBONN_evm.TU.Sc2ySwM_228.213 Anthoceros agrestis HOM05D004797 ORTHO05D005752 7.3e-71 271.9 261 52.5
Actinidia23978 Actinidia chinensis HOM05D004797 ORTHO05D005752 3.1e-69 266.5 251 55.4
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 4.0e-69 266.2 247 51.4
Ca_18973_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 8.3e-67 258.5 172 69.8
Ca_29677_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 8.3e-67 258.5 172 69.8
Psat7g172280 Pisum sativum HOM05D004797 ORTHO05D005752 7.1e-66 255.4 173 67.1
Mapoly0036s0095 Marchantia polymorpha HOM05D004797 ORTHO05D005752 3.9e-64 249.6 230 54.8
Haze_23164 Corylus avellana HOM05D004797 ORTHO05D005752 3.3e-63 246.5 177 66.7
Pp3c12_10080 Physcomitrium patens HOM05D004797 ORTHO05D005752 1.2e-62 244.6 217 53.5
FvH4_3g28490 Fragaria vesca HOM05D004797 ORTHO05D005752 2.1e-62 243.8 179 64.2
Migut.L00817 Erythranthe guttata HOM05D004797 ORTHO05D005752 4.7e-62 242.7 183 63.9
Migut.L00239 Erythranthe guttata HOM05D004797 ORTHO05D005752 2.3e-61 240.4 214 56.1
CDE06G1612 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 1.4e-58 231.1 331 42.9
CDE02G2983 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 1.0e-56 224.9 248 53.2
CBR_g54630 Chara braunii HOM05D004797 ORTHO05D005752 1.1e-55 221.5 253 46.2
Pp3c23_9320 Physcomitrium patens HOM05D004797 ORTHO05D005752 1.5e-55 221.1 207 54.1
unitig_60.g25644 Utricularia gibba HOM05D004797 ORTHO05D005752 2.5e-55 220.3 276 46.4
CBR_g19286 Chara braunii HOM05D004797 ORTHO05D005752 2.9e-51 206.8 250 42.8
Os11g0145700 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 1.0e-48 198.4 225 45.8
Sed0024369 Sechium edule HOM05D004797 ORTHO05D005752 4.9e-43 179.5 217 47.9
Cre16.g670250 Chlamydomonas reinhardtii HOM05D004797 ORTHO05D005752 1.7e-40 171.0 223 42.6
CDE02G1762 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 1.9e-39 167.5 209 49.3
Zm00001eb380670 Zea mays HOM05D008064 ORTHO05D005752 1.9e-39 167.5 179 46.4
Aqoxy3G03849 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 2.1e-38 164.1 205 45.4
Aqoxy3G02211 Aquilegia oxysepala HOM05D004797 ORTHO05D004745 6.2e-38 162.5 201 45.8
PRCOL_00001849 Prasinoderma coloniale HOM05D004797 ORTHO05D005752 3.1e-37 160.2 249 37.3
Zm00001eb115730 Zea mays HOM05D004797 ORTHO05D005752 1.9e-34 151.0 118 59.3
Zm00001eb287480 Zea mays HOM05D004797 ORTHO05D005752 3.2e-34 150.2 114 58.8
CBR_g54627 Chara braunii HOM05D004797 ORTHO05D005752 9.3e-34 148.7 181 44.2
Psat7g172360 Pisum sativum HOM05D004797 ORTHO05D005752 1.6e-33 147.9 91 71.4
Migut.L00818 Erythranthe guttata HOM05D004797 ORTHO05D005752 5.6e-31 139.4 81 75.3
unitig_60.g25645 Utricularia gibba HOM05D004797 ORTHO05D005752 6.1e-17 92.8 54 77.8
QL06p032345 Quercus lobata HOM05D004797 ORTHO05D050637 5.1e-16 89.7 49 75.5
QL93p0275_0020 Quercus lobata HOM05D004797 ORTHO05D050637 5.1e-16 89.7 49 75.5
PRCOL_00002342 Prasinoderma coloniale HOM05D003906 ORTHO05D004776 4.8e-06 56.6 73 41.1


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