Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012683 Camellia sinensis var. sinensis HOM05D024952 ORTHO05D004688 9.1e-72 273.5 139 100.0
CSS0012342 Camellia sinensis var. sinensis HOM05D024952 ORTHO05D004688 3.4e-66 255.0 143 93.0
CSS0042318 Camellia sinensis var. sinensis HOM05D024952 ORTHO05D004688 3.4e-66 255.0 143 93.0
CSS0016850 Camellia sinensis var. sinensis HOM05D024952 ORTHO05D004688 4.8e-65 251.1 144 91.0
CSS0044848 Camellia sinensis var. sinensis HOM05D024952 ORTHO05D004688 6.3e-57 224.2 144 84.7
CSS0004736 Camellia sinensis var. sinensis HOM05D003988 ORTHO05D004688 3.3e-21 105.5 63 93.7
Actinidia18930 Actinidia chinensis HOM05D003988 ORTHO05D004688 2.8e-12 75.9 63 66.7
Dinv15683 Davidia involucrata HOM05D003988 ORTHO05D004688 1.4e-11 73.6 61 67.2
Actinidia35091 Actinidia chinensis HOM05D003988 ORTHO05D004688 5.3e-11 71.6 63 63.5
Rhsim08G0133900 Rhododendron simsii HOM05D003988 ORTHO05D004688 6.9e-11 71.2 63 61.9
Lj5C149G16 Lonicera japonica HOM05D003988 ORTHO05D004688 1.2e-10 70.5 63 60.3
vmacro16441 Vaccinium macrocarpon HOM05D003988 ORTHO05D004688 2.0e-10 69.7 63 61.9
Hma1.2p1_0653F.1_g196250 Hydrangea macrophylla HOM05D003988 ORTHO05D004688 9.9e-10 67.4 63 57.1
Rhsim12G0143000 Rhododendron simsii HOM05D003988 ORTHO05D004688 1.7e-09 66.6 63 60.3
GSVIVG01008297001 Vitis vinifera HOM05D003988 ORTHO05D004688 1.7e-09 66.6 60 55.0
Dinv28109 Davidia involucrata HOM05D003988 ORTHO05D004688 1.1e-08 63.9 63 60.3
DCAR_023207 Daucus carota HOM05D003988 ORTHO05D004688 1.4e-08 63.5 61 50.8
CSS0009918 Camellia sinensis var. sinensis HOM05D003988 ORTHO05D004688 1.9e-08 63.2 63 55.6
CiPaw.16G086900 Carya illinoinensis HOM05D003988 ORTHO05D004688 4.2e-08 62.0 63 52.4
Atru.chr9.851 Acer truncatum HOM05D003988 ORTHO05D004688 5.4e-08 61.6 61 52.5
Aa31LG8G5200 Aethionema arabicum HOM05D003988 ORTHO05D004688 5.4e-08 61.6 65 52.3
Cc04_g07060 Coffea canephora HOM05D003988 ORTHO05D004688 5.4e-08 61.6 63 54.0
vmacro17712 Vaccinium macrocarpon HOM05D003988 ORTHO05D004688 5.4e-08 61.6 63 55.6
Cfa019762 Carpinus fangiana HOM05D003988 ORTHO05D004688 7.1e-08 61.2 63 52.4
Lsat_1_v5_gn_8_146920 Lactuca sativa HOM05D003988 ORTHO05D004688 9.3e-08 60.8 61 55.7
Nitab4.5_0009306g0030 Nicotiana tabacum HOM05D003988 ORTHO05D004688 2.1e-07 59.7 64 50.0
HanXRQChr08g0226051 Helianthus annuus HOM05D003988 ORTHO05D004688 2.7e-07 59.3 63 54.0
Potri.012G056000 Populus trichocarpa HOM05D003988 ORTHO05D004688 2.7e-07 59.3 49 65.3
Sed0007612 Sechium edule HOM05D003988 ORTHO05D004688 3.5e-07 58.9 49 57.1
Eucgr.K02227 Eucalyptus grandis HOM05D003988 ORTHO05D004688 4.6e-07 58.5 63 54.0
Thhalv10020065m.g Eutrema salsugineum HOM05D003988 ORTHO05D004688 4.6e-07 58.5 65 49.2
TWI81G0944 Tripterygium wilfordii HOM05D003988 ORTHO05D004688 4.6e-07 58.5 61 54.1
AT3G18370 Arabidopsis thaliana HOM05D003988 ORTHO05D004688 7.9e-07 57.8 61 49.2
CANSAT80G2599 Cannabis sativa HOM05D003988 ORTHO05D004688 7.9e-07 57.8 63 47.6
Ciclev10018856m.g Citrus clementina HOM05D003988 ORTHO05D004688 7.9e-07 57.8 49 59.2
MD14G1227200 Malus domestica HOM05D003988 ORTHO05D004688 7.9e-07 57.8 63 49.2
Nitab4.5_0002906g0030 Nicotiana tabacum HOM05D003988 ORTHO05D004688 7.9e-07 57.8 64 50.0
Thecc.03G036400 Theobroma cacao HOM05D003988 ORTHO05D004688 7.9e-07 57.8 61 47.5
AL3G31660 Arabidopsis lyrata HOM05D003988 ORTHO05D004688 1.0e-06 57.4 86 41.9
Carub.0003s1815 Capsella rubella HOM05D003988 ORTHO05D004688 1.0e-06 57.4 65 46.2
Cpa.g.sc3.506 Carica papaya HOM05D003988 ORTHO05D004688 1.0e-06 57.4 63 50.8
COL.COLO4_32832 Corchorus olitorius HOM05D003988 ORTHO05D004688 1.0e-06 57.4 61 47.5
Manes.05G113166 Manihot esculenta HOM05D003988 ORTHO05D004688 1.0e-06 57.4 49 65.3
PGR044G0911 Punica granatum HOM05D003988 ORTHO05D004688 1.0e-06 57.4 63 50.8
Sp3g16480 Schrenkiella parvula HOM05D003988 ORTHO05D004688 1.0e-06 57.4 61 49.2
BcaB06g25881 Brassica carinata HOM05D003988 ORTHO05D004688 1.3e-06 57.0 65 47.7
BcaC05g28634 Brassica carinata HOM05D003988 ORTHO05D004688 1.3e-06 57.0 65 47.7
A05p31310 Brassica napus HOM05D003988 ORTHO05D004688 1.3e-06 57.0 65 47.7
C05p47400 Brassica napus HOM05D003988 ORTHO05D004688 1.3e-06 57.0 65 47.7
BolC5t33466H Brassica oleracea HOM05D003988 ORTHO05D004688 1.3e-06 57.0 65 47.7
BraA05t21969Z Brassica rapa HOM05D003988 ORTHO05D004688 1.3e-06 57.0 65 47.7
Prupe.5G221900 Prunus persica HOM05D003988 ORTHO05D004688 1.3e-06 57.0 63 50.8
Lalb_Chr14g0371121 Lupinus albus HOM05D003988 ORTHO05D004688 1.7e-06 56.6 66 48.5
QL10p025473 Quercus lobata HOM05D003988 ORTHO05D004688 1.7e-06 56.6 60 50.0
ClCG04G011120 Citrullus lanatus HOM05D003988 ORTHO05D004688 2.3e-06 56.2 49 59.2
MELO3C002088.2 Cucumis melo HOM05D003988 ORTHO05D004688 2.3e-06 56.2 51 54.9
DCAR_011356 Daucus carota HOM05D003988 ORTHO05D004688 2.3e-06 56.2 53 54.7
Lj2g0015725 Lotus japonicus HOM05D003988 ORTHO05D004688 2.3e-06 56.2 67 41.8
Sed0017030 Sechium edule HOM05D003988 ORTHO05D004688 2.3e-06 56.2 49 55.1
TWI15G0963 Tripterygium wilfordii HOM05D003988 ORTHO05D004688 2.3e-06 56.2 61 52.5
CARHR093720 Cardamine hirsuta HOM05D003988 ORTHO05D004688 3.0e-06 55.8 48 52.1
CsaV3_1G006640 Cucumis sativus L. HOM05D003988 ORTHO05D004688 3.0e-06 55.8 49 57.1
Migut.A00873 Erythranthe guttata HOM05D003988 ORTHO05D004688 3.0e-06 55.8 63 47.6
Pp3c9_20840 Physcomitrium patens HOM05D003988 ORTHO05D004688 3.0e-06 55.8 63 42.9
Sabra15G0039000 Salix brachista HOM05D003988 ORTHO05D004688 3.0e-06 55.8 67 55.2
THA.LOC104820392 Tarenaya hassleriana HOM05D003988 ORTHO05D004688 3.0e-06 55.8 65 46.2
Duzib205G1863 Durio zibethinus HOM05D003988 ORTHO05D004688 3.9e-06 55.5 61 47.5
MD06G1216700 Malus domestica HOM05D003988 ORTHO05D004688 3.9e-06 55.5 63 47.6
CiPaw.15G131300 Carya illinoinensis HOM05D003988 ORTHO05D004688 5.1e-06 55.1 61 49.2
Os01g0128800 Oryza sativa ssp. japonica HOM05D003988 ORTHO05D004688 5.1e-06 55.1 63 46.0
Duzib068G0062 Durio zibethinus HOM05D003988 ORTHO05D004688 6.6e-06 54.7 61 45.9
Oeu064716.1 Olea europaea HOM05D003988 ORTHO05D004688 6.6e-06 54.7 63 50.8
Hund02386 Selenicereus undatus HOM05D003988 ORTHO05D004688 8.7e-06 54.3 63 41.3


User provided reference genes

Program Settings