Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012664 Camellia sinensis var. sinensis HOM05D000136 ORTHO05D033943 2.3e-51 205.3 107 100.0
vmacro18991 Vaccinium macrocarpon HOM05D000136 ORTHO05D007933 2.0e-18 95.9 111 57.7
Rhsim08G0213800 Rhododendron simsii HOM05D000136 ORTHO05D033943 9.3e-16 87.0 101 55.4
Peaxi162Scf00034g00143 Petunia axillaris HOM05D000136 ORTHO05D007933 2.3e-14 82.4 101 56.4
QL05p029505 Quercus lobata HOM05D000136 ORTHO05D007933 7.4e-13 77.4 101 49.5
Actinidia01751 Actinidia chinensis HOM05D000136 ORTHO05D007933 2.1e-12 75.9 101 52.5
Prupe.3G085200 Prunus persica HOM05D000136 ORTHO05D007933 1.4e-11 73.2 103 48.5
Ciclev10026390m.g Citrus clementina HOM05D000136 ORTHO05D007933 1.2e-10 70.1 104 51.9
Eucgr.F03866 Eucalyptus grandis HOM05D000136 ORTHO05D007933 5.8e-10 67.8 109 45.0
Oeu027808.1 Olea europaea HOM05D000020 ORTHO05D000543 1.0e-09 67.0 104 51.9
MD17G1209800 Malus domestica HOM05D000136 ORTHO05D007933 1.3e-09 66.6 104 49.0
CiPaw.01G246600 Carya illinoinensis HOM05D000136 ORTHO05D007933 2.2e-09 65.9 104 47.1
Eucgr.L02712 Eucalyptus grandis HOM05D000136 ORTHO05D033943 4.9e-09 64.7 109 43.1
Duzib160G0787 Durio zibethinus HOM05D000136 ORTHO05D007933 6.5e-09 64.3 104 48.1
Gohir.A05G126100 Gossypium hirsutum HOM05D000136 ORTHO05D007933 8.4e-09 63.9 104 50.0
Lj3g0013985 Lotus japonicus HOM05D000136 ORTHO05D007933 1.4e-08 63.2 101 50.5
Gorai.009G131100 Gossypium raimondii HOM05D000136 ORTHO05D007933 1.9e-08 62.8 104 48.1
Glyma.08G212000 Glycine max HOM05D000136 ORTHO05D007933 3.2e-08 62.0 104 48.1
Medtr4g010320 Medicago truncatula HOM05D000136 ORTHO05D007933 3.2e-08 62.0 99 46.5
Manes.04G113600 Manihot esculenta HOM05D000136 ORTHO05D007933 4.2e-08 61.6 100 44.0
GSVIVG01017322001 Vitis vinifera HOM05D000136 ORTHO05D007933 4.2e-08 61.6 102 49.0
CANSAT56G3249 Cannabis sativa HOM05D000136 ORTHO05D007933 5.5e-08 61.2 101 46.5
Dinv30596 Davidia involucrata HOM05D000136 ORTHO05D007933 5.5e-08 61.2 102 51.0
Gohir.D05G127000 Gossypium hirsutum HOM05D000136 ORTHO05D007933 1.6e-07 59.7 104 47.1
Actinidia15773 Actinidia chinensis HOM05D000136 ORTHO05D007933 2.7e-07 58.9 94 47.9
TWI75G1547 Tripterygium wilfordii HOM05D000136 ORTHO05D007933 3.5e-07 58.5 115 42.6
TAR625G0530 Trochodendron aralioides HOM05D000136 ORTHO05D007933 1.0e-06 57.0 103 45.6
COL.COLO4_12953 Corchorus olitorius HOM05D000136 ORTHO05D007933 1.8e-06 56.2 103 44.7
Nitab4.5_0005728g0020 Nicotiana tabacum HOM05D000136 ORTHO05D007933 2.3e-06 55.8 102 48.0
Atru.chr1.2988 Acer truncatum HOM05D000136 ORTHO05D007933 3.0e-06 55.5 103 42.7
Nn8g39468 Nelumbo nucifera HOM05D000136 ORTHO05D007933 3.0e-06 55.5 99 45.5
PGR102G0618 Punica granatum HOM05D000136 ORTHO05D007933 8.7e-06 53.9 104 42.3
Thecc.06G021900 Theobroma cacao HOM05D000136 ORTHO05D007933 8.7e-06 53.9 102 43.1


User provided reference genes

Program Settings