Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.8e-122 442.6 220 100.0
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 1.1e-66 257.3 168 78.0
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 9.7e-60 234.2 153 78.4
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 3.0e-53 212.6 175 62.9
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 1.1e-52 210.7 157 72.6
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 2.6e-52 209.5 163 66.3
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 9.1e-50 201.1 162 64.2
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 9.1e-50 201.1 158 63.3
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 1.0e-48 197.6 165 61.2
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 1.3e-48 197.2 186 58.6
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 2.2e-48 196.4 172 60.5
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 1.1e-47 194.1 146 67.8
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 4.2e-47 192.2 154 64.9
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 4.2e-47 192.2 163 63.8
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 7.2e-47 191.4 154 64.9
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.1e-46 189.9 161 64.0
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 4.7e-46 188.7 154 65.6
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 4.7e-46 188.7 165 59.4
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 6.1e-46 188.3 133 72.2
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 1.4e-45 187.2 163 60.1
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 1.8e-45 186.8 163 61.3
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 2.3e-45 186.4 164 58.5
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 5.2e-45 185.3 164 59.1
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 6.7e-45 184.9 156 62.8
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 1.2e-44 184.1 161 55.9
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 2.0e-44 183.3 155 62.6
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 3.3e-44 182.6 155 63.2
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 5.7e-44 181.8 173 57.2
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 1.3e-43 180.6 164 57.9
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 1.3e-43 180.6 157 62.4
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 1.7e-43 180.3 146 65.8
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 1.7e-43 180.3 154 64.3
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 2.8e-43 179.5 157 56.1
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 2.8e-43 179.5 155 61.9
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 8.2e-43 177.9 150 62.7
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 8.2e-43 177.9 163 56.4
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 8.2e-43 177.9 163 56.4
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.1e-42 177.6 164 55.5
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 1.1e-42 177.6 155 60.6
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 1.4e-42 177.2 155 59.4
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 2.4e-42 176.4 163 56.4
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 3.1e-42 176.0 171 56.1
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 3.1e-42 176.0 156 57.7
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 4.1e-42 175.6 155 59.4
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 5.3e-42 175.3 156 57.7
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 7.0e-42 174.9 163 55.8
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 7.0e-42 174.9 160 55.6
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 9.1e-42 174.5 143 65.7
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 1.2e-41 174.1 153 61.4
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 1.6e-41 173.7 155 59.4
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 1.6e-41 173.7 155 59.4
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 2.7e-41 172.9 168 52.4
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 2.7e-41 172.9 156 62.2
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.7e-41 172.9 132 66.7
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 3.5e-41 172.6 145 63.4
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 4.5e-41 172.2 157 55.4
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 5.9e-41 171.8 155 58.7
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 1.0e-40 171.0 177 54.8
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 3.8e-40 169.1 163 55.8
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 6.5e-40 168.3 152 58.6
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 1.1e-39 167.5 154 61.7
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 5.5e-39 165.2 156 59.0
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 7.2e-39 164.9 165 53.9
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 7.2e-39 164.9 155 58.1
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 3.6e-38 162.5 140 60.7
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 4.7e-38 162.2 155 56.1
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 4.0e-37 159.1 143 58.0
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 8.8e-37 157.9 166 56.0
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 1.2e-36 157.5 124 66.1
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 1.2e-36 157.5 186 50.0
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 3.4e-36 156.0 130 63.8
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 7.5e-36 154.8 172 51.7
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 7.5e-36 154.8 156 52.6
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 1.3e-35 154.1 163 52.1
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 8.3e-35 151.4 170 48.2
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 1.1e-34 151.0 157 53.5
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 1.4e-34 150.6 169 53.3
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 4.1e-34 149.1 149 56.4
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 5.4e-34 148.7 170 47.1
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 5.4e-34 148.7 155 56.8
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 9.1e-34 147.9 143 55.9
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 1.2e-33 147.5 170 47.1
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 2.7e-33 146.4 170 46.5
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 7.7e-33 144.8 170 47.6
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 2.2e-32 143.3 127 55.1
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 8.5e-32 141.4 145 53.8
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 1.5e-31 140.6 160 48.8
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 3.2e-31 139.4 143 51.0
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 7.2e-31 138.3 132 52.3
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 6.1e-30 135.2 214 40.2
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 8.8e-29 131.3 135 51.1
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 2.0e-28 130.2 182 43.4
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 2.0e-28 130.2 133 47.4
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 4.4e-28 129.0 147 49.7
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 7.5e-28 128.3 112 60.7
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 1.3e-27 127.5 207 39.1
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 4.9e-27 125.6 173 42.8
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 1.4e-26 124.0 163 45.4
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 1.8e-26 123.6 202 40.1
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 1.6e-25 120.6 202 39.1
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 2.7e-25 119.8 214 36.9
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.0e-24 117.9 162 47.5
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 5.0e-24 115.5 86 73.3
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 5.0e-24 115.5 161 41.6
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 1.9e-23 113.6 157 42.0
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 1.2e-22 110.9 115 53.9
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 1.6e-22 110.5 138 47.8
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 2.1e-22 110.2 185 40.5
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 4.0e-21 105.9 144 45.8
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 2.0e-20 103.6 133 45.9
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 8.3e-19 98.2 193 34.7
Actinidia36808 Actinidia chinensis HOM05D005804 ORTHO05D006849 2.0e-17 93.6 169 39.1
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 7.3e-15 85.1 73 61.6
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 2.2e-11 73.6 168 32.7


User provided reference genes

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