Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 1.4e-166 589.7 343 100.0
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 4.9e-127 458.4 344 71.5
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 6.9e-121 438.0 344 76.2
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 8.4e-119 431.0 344 75.3
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 2.6e-112 409.5 339 74.9
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 2.5e-107 392.9 344 69.5
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 3.3e-107 392.5 347 70.9
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 4.8e-106 388.7 305 79.7
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 8.2e-106 387.9 340 61.5
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 1.1e-105 387.5 336 69.6
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 1.4e-105 387.1 338 60.7
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 4.1e-105 385.6 339 68.4
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 4.1e-105 385.6 344 70.3
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 2.9e-103 379.4 344 68.6
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 6.5e-103 378.3 339 59.3
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 3.2e-102 375.9 339 67.8
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 1.2e-101 374.0 345 60.3
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 1.2e-101 374.0 341 63.3
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 1.6e-101 373.6 344 67.4
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 5.1e-100 368.6 347 64.0
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 1.5e-99 367.1 344 58.1
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 2.0e-99 366.7 334 66.2
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 3.3e-99 365.9 344 65.1
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 4.3e-99 365.5 344 64.8
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.7e-98 363.6 342 64.6
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.7e-98 363.6 344 64.5
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 2.8e-98 362.8 338 63.3
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 4.8e-98 362.1 344 57.0
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 4.8e-98 362.1 344 57.0
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 4.8e-98 362.1 344 56.7
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 2.4e-97 359.8 333 67.0
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 5.9e-96 355.1 325 63.7
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 1.3e-95 354.0 320 59.4
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 1.7e-95 353.6 335 66.3
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 2.2e-95 353.2 344 60.8
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 5.0e-95 352.1 346 62.4
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 2.5e-94 349.7 300 59.7
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 4.2e-94 349.0 337 56.7
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 4.7e-93 345.5 347 55.6
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 1.8e-92 343.6 337 53.7
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 1.8e-92 343.6 317 56.8
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 2.3e-92 343.2 328 66.2
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 6.7e-92 341.7 317 56.8
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 1.1e-91 340.9 324 55.9
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 1.5e-91 340.5 334 56.0
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 2.0e-91 340.1 311 56.9
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 2.0e-91 340.1 317 56.8
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 4.4e-91 339.0 315 58.4
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 7.4e-91 338.2 350 64.9
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 2.2e-90 336.7 339 52.5
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 2.8e-90 336.3 346 53.5
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 2.8e-90 336.3 333 55.6
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 3.7e-90 335.9 344 60.2
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 5.9e-88 328.6 344 60.5
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 5.9e-88 328.6 345 60.9
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 1.7e-87 327.0 332 65.1
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 1.4e-86 323.9 320 63.4
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 2.5e-86 323.2 319 60.5
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 2.5e-86 323.2 329 62.0
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 7.2e-86 321.6 345 60.6
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 1.2e-85 320.9 346 51.7
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 1.8e-84 317.0 316 55.1
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 6.7e-84 315.1 319 62.1
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 8.8e-84 314.7 319 61.8
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 2.6e-83 313.2 332 60.2
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 4.4e-83 312.4 323 61.3
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 5.7e-83 312.0 319 61.4
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 2.2e-82 310.1 319 61.8
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 2.8e-82 309.7 319 60.8
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 8.2e-82 308.1 311 63.0
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 1.1e-81 307.8 339 59.3
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 3.1e-81 306.2 331 59.5
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 7.0e-81 305.1 320 60.3
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 3.5e-80 302.8 331 52.3
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 3.5e-80 302.8 331 53.8
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 4.5e-80 302.4 320 60.0
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 4.5e-80 302.4 339 60.5
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 1.3e-79 300.8 328 51.2
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 2.9e-79 299.7 320 59.1
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 2.9e-79 299.7 320 59.1
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 1.9e-78 297.0 317 51.1
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 3.2e-78 296.2 311 53.7
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 4.7e-77 292.4 317 50.5
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 1.5e-75 287.3 315 49.2
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 4.4e-75 285.8 328 50.9
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 5.7e-75 285.4 319 49.5
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 5.2e-68 262.3 345 45.5
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 1.2e-67 261.2 319 57.7
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 2.2e-66 256.9 317 54.6
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 5.9e-64 248.8 270 51.5
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 6.8e-60 235.3 231 66.7
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 2.5e-54 216.9 187 63.1
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 2.6e-51 206.8 238 47.1
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 3.6e-45 186.4 174 59.2
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 2.5e-38 163.7 161 54.0
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 1.8e-36 157.5 175 52.0
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 2.2e-34 150.6 155 51.6
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 7.8e-32 142.1 183 64.5
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 1.3e-31 141.4 113 60.2
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 2.8e-29 133.7 99 67.7
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.0e-23 115.2 189 40.2
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 5.8e-19 99.4 102 50.0
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 9.3e-17 92.0 108 50.0
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 6.9e-12 75.9 110 42.7
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 8.4e-10 68.9 66 48.5


User provided reference genes

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