Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012622 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D011117 3.2e-98 361.7 174 100.0
arahy.Tifrunner.gnm1.ann1.URY1CV Arachis hypogaea HOM05D000533 ORTHO05D011117 5.0e-43 178.3 106 87.7
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.6e-41 172.2 100 88.0
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.6e-41 172.2 100 88.0
BcaC04g20703 Brassica carinata HOM05D000963 ORTHO05D011117 4.7e-41 171.8 99 87.9
BcaC04g20780 Brassica carinata HOM05D000963 ORTHO05D011117 4.7e-41 171.8 99 87.9
BcaNung07084 Brassica carinata HOM05D000963 ORTHO05D011117 4.7e-41 171.8 99 87.9
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.8e-40 169.9 98 87.8
Sopen06g015040 Solanum pennellii HOM05D000963 ORTHO05D011117 2.3e-40 169.5 96 89.6
C04p22530 Brassica napus HOM05D000963 ORTHO05D011117 5.2e-40 168.3 98 87.8
C09p24690 Brassica napus HOM05D000963 ORTHO05D011117 5.2e-40 168.3 98 87.8
C09p39370 Brassica napus HOM05D000963 ORTHO05D011117 5.2e-40 168.3 98 87.8
BolSC47t61068H Brassica oleracea HOM05D000963 ORTHO05D011117 5.2e-40 168.3 98 87.8
Cpa.g.sc2719.1 Carica papaya HOM05D000963 ORTHO05D011117 5.2e-40 168.3 97 88.7
unitig_8.g4107 Utricularia gibba HOM05D000963 ORTHO05D011117 1.2e-39 167.2 96 88.5
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 1.5e-39 166.8 97 88.7
MELO3C033790.2 Cucumis melo HOM05D000963 ORTHO05D011117 7.5e-39 164.5 95 89.5
MELO3C027127.2 Cucumis melo HOM05D000963 ORTHO05D011117 1.8e-37 159.8 95 87.4
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 1.2e-36 157.1 104 79.8
Oeu038562.1 Olea europaea HOM05D000963 ORTHO05D011117 3.8e-35 152.1 96 82.3
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 8.0e-33 144.4 95 78.9
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 2.4e-29 132.9 72 90.3
MELO3C028157.2 Cucumis melo HOM05D000963 ORTHO05D011117 3.1e-29 132.5 71 91.5
BcaB02g11354 Brassica carinata HOM05D000963 ORTHO05D011117 1.5e-26 123.6 69 87.0
Sopen01g027140 Solanum pennellii HOM05D000963 ORTHO05D011117 9.5e-26 120.9 72 84.7
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 6.8e-24 114.8 61 91.8
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 6.8e-24 114.8 61 91.8
MELO3C028252.2 Cucumis melo HOM05D000963 ORTHO05D011117 7.5e-23 111.3 62 88.7
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 4.9e-22 108.6 61 85.2
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 1.8e-21 106.7 63 82.5
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 1.2e-17 94.0 55 81.8
arahy.Tifrunner.gnm1.ann1.H1VL0A Arachis hypogaea HOM05D000963 ORTHO05D011117 4.7e-17 92.0 69 69.6
EL10Ac6g15367 Beta vulgaris HOM05D000963 ORTHO05D011117 1.5e-15 87.0 86 60.5
TAR629G1823 Trochodendron aralioides HOM05D001041 ORTHO05D000846 1.7e-14 83.6 61 73.8
VMungo1024G0004 Vigna mungo HOM05D000963 ORTHO05D011117 2.9e-14 82.8 70 58.6
BcaC04g22599 Brassica carinata HOM05D000963 ORTHO05D011117 6.4e-14 81.6 42 90.5
MELO3C030559.2 Cucumis melo HOM05D000963 ORTHO05D011117 1.1e-13 80.9 41 90.2
BraSC143t45648Z Brassica rapa HOM05D000963 ORTHO05D011117 1.4e-13 80.5 42 88.1
BraSC58t46452Z Brassica rapa HOM05D000963 ORTHO05D011117 7.0e-13 78.2 45 86.7
Gohir.D12G186150 Gossypium hirsutum HOM05D000963 ORTHO05D011117 3.9e-11 72.4 47 78.7
Hma1.2p1_0016F.1_g010990 Hydrangea macrophylla HOM05D000963 ORTHO05D011117 8.6e-11 71.2 43 83.7
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 8.6e-11 71.2 43 83.7
arahy.Tifrunner.gnm1.ann1.NK9AGX Arachis hypogaea HOM05D000089 ORTHO05D011117 5.6e-10 68.6 38 89.5
BraSC138t45525Z Brassica rapa HOM05D000963 ORTHO05D011117 4.7e-09 65.5 41 82.9
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 3.1e-08 62.8 43 74.4
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 4.0e-08 62.4 39 69.2
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 7.5e-07 58.2 41 73.2
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 2.9e-06 56.2 36 83.3
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 2.9e-06 56.2 36 83.3
arahy.Tifrunner.gnm1.ann1.BMCQ1I Arachis hypogaea HOM05D000963 ORTHO05D005131 8.3e-06 54.7 33 81.8


User provided reference genes

Program Settings