Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012616 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 1.8e-85 319.3 173 100.0
CSS0024126 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 2.2e-83 312.4 173 98.3
vmacro01000 Vaccinium macrocarpon HOM05D005031 ORTHO05D006098 1.8e-64 249.6 171 78.4
Dinv41325 Davidia involucrata HOM05D005031 ORTHO05D006098 1.5e-63 246.5 172 77.3
Rhsim03G0261100 Rhododendron simsii HOM05D005031 ORTHO05D006098 9.0e-61 237.3 193 67.9
Hma1.2p1_1493F.1_g286836 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 1.5e-60 236.5 172 68.6
Actinidia38656 Actinidia chinensis HOM05D005031 ORTHO05D006098 1.7e-59 233.0 171 73.7
Thecc.09G157500 Theobroma cacao HOM05D005031 ORTHO05D006098 1.1e-58 230.3 172 66.9
Duzib187G1655 Durio zibethinus HOM05D005031 ORTHO05D006098 1.4e-58 229.9 172 65.7
Gohir.D08G098400 Gossypium hirsutum HOM05D005031 ORTHO05D006098 1.4e-58 229.9 172 66.3
Oeu045637.1 Olea europaea HOM05D005031 ORTHO05D006098 1.4e-58 229.9 171 65.5
Duzib187G0728 Durio zibethinus HOM05D005031 ORTHO05D006098 4.2e-58 228.4 172 65.1
Gohir.A08G087500 Gossypium hirsutum HOM05D005031 ORTHO05D006098 4.2e-58 228.4 172 65.7
Gorai.004G106100 Gossypium raimondii HOM05D005031 ORTHO05D006098 5.5e-58 228.0 172 65.7
Duzib168G1565 Durio zibethinus HOM05D005031 ORTHO05D006098 7.1e-58 227.6 172 65.1
Cc06_g14310 Coffea canephora HOM05D005031 ORTHO05D006098 4.6e-57 224.9 171 70.8
Oeu031856.2 Olea europaea HOM05D005031 ORTHO05D006098 6.0e-57 224.6 171 63.2
Hma1.2p1_2438F.1_g322190 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 7.9e-57 224.2 147 74.8
COL.COLO4_10074 Corchorus olitorius HOM05D005031 ORTHO05D006098 2.3e-56 222.6 172 65.1
Manes.06G033000 Manihot esculenta HOM05D005031 ORTHO05D006098 2.3e-56 222.6 172 66.9
SalBow1G8617 Salvia bowleyana HOM05D005031 ORTHO05D006098 3.9e-56 221.9 171 71.9
Actinidia33308 Actinidia chinensis HOM05D005031 ORTHO05D006098 5.1e-56 221.5 171 71.9
Hma1.2p1_2290F.1_g319050 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 8.7e-56 220.7 171 63.7
MD00G1091200 Malus domestica HOM05D005031 ORTHO05D006098 1.5e-55 219.9 172 64.0
Rhsim03G0260600 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.9e-55 219.5 236 55.9
RcHm_v2.0_Chr4g0405231 Rosa chinensis HOM05D005031 ORTHO05D006098 2.5e-55 219.2 172 64.0
Ciclev10012924m.g Citrus clementina HOM05D005031 ORTHO05D006098 3.3e-55 218.8 171 64.3
EL10Ac7g17961 Beta vulgaris HOM05D005031 ORTHO05D006098 4.3e-55 218.4 171 62.0
TAR636G0261 Trochodendron aralioides HOM05D005031 ORTHO05D006098 7.4e-55 217.6 173 67.1
Migut.K00291 Erythranthe guttata HOM05D005031 ORTHO05D006098 9.6e-55 217.2 171 70.8
FvH4_3g25860 Fragaria vesca HOM05D005031 ORTHO05D006098 9.6e-55 217.2 172 63.4
FAN11G2096 Fragaria x ananassa HOM05D005031 ORTHO05D006098 9.6e-55 217.2 172 63.4
SGA_v2.0_scaffold12G06032 Striga asiatica HOM05D005031 ORTHO05D006098 1.6e-54 216.5 171 69.6
Hund18050 Selenicereus undatus HOM05D005031 ORTHO05D006098 3.7e-54 215.3 171 63.7
FAN21G1649 Fragaria x ananassa HOM05D005031 ORTHO05D006098 4.8e-54 214.9 172 62.8
FAN25G2017 Fragaria x ananassa HOM05D005031 ORTHO05D006098 4.8e-54 214.9 172 62.8
MD00G1059200 Malus domestica HOM05D005031 ORTHO05D006098 4.8e-54 214.9 172 62.8
Nitab4.5_0001036g0100 Nicotiana tabacum HOM05D005031 ORTHO05D006098 4.8e-54 214.9 171 67.8
Medtr4g130180 Medicago truncatula HOM05D005031 ORTHO05D006098 6.2e-54 214.5 171 62.6
Nn8g40193 Nelumbo nucifera HOM05D005031 ORTHO05D006098 8.2e-54 214.2 172 63.4
CiPaw.06G050600 Carya illinoinensis HOM05D005031 ORTHO05D006098 1.1e-53 213.8 171 66.1
Solyc07g006150.3 Solanum lycopersicum HOM05D005031 ORTHO05D006098 1.8e-53 213.0 171 67.3
Sopen07g002260 Solanum pennellii HOM05D005031 ORTHO05D006098 1.8e-53 213.0 171 67.3
GSVIVG01033204001 Vitis vinifera HOM05D005031 ORTHO05D006098 2.4e-53 212.6 171 63.2
Potri.018G101100 Populus trichocarpa HOM05D005031 ORTHO05D006098 3.1e-53 212.2 171 62.6
Nitab4.5_0002545g0040 Nicotiana tabacum HOM05D005031 ORTHO05D006098 4.1e-53 211.8 171 66.7
VMungo1215G0734 Vigna mungo HOM05D005031 ORTHO05D006098 4.1e-53 211.8 171 62.0
Glyma.02G207700 Glycine max HOM05D005031 ORTHO05D006098 5.3e-53 211.5 171 61.4
CAN.G1190.6 Capsicum annuum HOM05D005031 ORTHO05D006098 6.9e-53 211.1 171 60.8
Ca_21160_v3 Cicer arietinum L. HOM05D005031 ORTHO05D006098 6.9e-53 211.1 171 61.4
Atru.chr12.1707 Acer truncatum HOM05D005031 ORTHO05D006098 9.0e-53 210.7 171 67.3
TWI73G0469 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 9.0e-53 210.7 172 61.0
Phvul.003G152700 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 1.2e-52 210.3 171 61.4
Glyma.17G070000 Glycine max HOM05D005031 ORTHO05D006098 1.5e-52 209.9 171 60.8
Peaxi162Scf00038g00324 Petunia axillaris HOM05D005031 ORTHO05D006098 2.0e-52 209.5 171 61.4
Phvul.010G125500 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 2.6e-52 209.1 171 60.8
RcHm_v2.0_Chr5g0047191 Rosa chinensis HOM05D005031 ORTHO05D006098 2.6e-52 209.1 171 62.0
MELO3C004109.2 Cucumis melo HOM05D005031 ORTHO05D006098 3.4e-52 208.8 172 62.2
PGSC0003DMG400011218 Solanum tuberosum HOM05D005031 ORTHO05D006098 4.5e-52 208.4 171 66.1
TPR.G1244 Trifolium pratense HOM05D005031 ORTHO05D006098 4.5e-52 208.4 171 59.6
Lj6g0018969 Lotus japonicus HOM05D005031 ORTHO05D006098 5.8e-52 208.0 171 60.8
ATR0580G158 Amborella trichopoda HOM05D005031 ORTHO05D006098 7.6e-52 207.6 172 60.5
arahy.Tifrunner.gnm1.ann1.QFVN2V Arachis hypogaea HOM05D005031 ORTHO05D006098 1.0e-51 207.2 171 60.8
Prupe.1G100400 Prunus persica HOM05D005031 ORTHO05D006098 1.3e-51 206.8 172 59.9
Thhalv10026393m.g Eutrema salsugineum HOM05D005031 ORTHO05D006098 1.7e-51 206.5 171 61.4
QL01p011713 Quercus lobata HOM05D005031 ORTHO05D006098 1.7e-51 206.5 171 66.1
MSTRG.10716 Avicennia marina HOM05D005031 ORTHO05D006098 2.2e-51 206.1 171 67.3
THA.LOC104819960 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 5.0e-51 204.9 171 59.6
AL4G13970 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 8.4e-51 204.1 171 60.8
Carub.0004s0310 Capsella rubella HOM05D005031 ORTHO05D006098 8.4e-51 204.1 171 60.2
CsaV3_2G007780 Cucumis sativus L. HOM05D005031 ORTHO05D006098 8.4e-51 204.1 172 58.1
Sed0023985 Sechium edule HOM05D005031 ORTHO05D006098 8.4e-51 204.1 172 59.3
ECA234G3840 Erigeron canadensis HOM05D005031 ORTHO05D006098 1.4e-50 203.4 171 62.6
HanXRQChr10g0307831 Helianthus annuus HOM05D005031 ORTHO05D006098 1.4e-50 203.4 171 63.2
PSO478G0084 Papaver somniferum HOM05D005031 ORTHO05D006098 1.4e-50 203.4 172 58.7
PGR031G2537 Punica granatum HOM05D005031 ORTHO05D006098 2.5e-50 202.6 172 59.9
AT2G23940 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 4.2e-50 201.8 171 59.6
PSO017G4787 Papaver somniferum HOM05D005031 ORTHO05D006098 4.2e-50 201.8 172 58.1
Zm00001eb186920 Zea mays HOM05D005031 ORTHO05D006098 4.2e-50 201.8 172 61.6
Atru.chr12.1715 Acer truncatum HOM05D005031 ORTHO05D006098 7.1e-50 201.1 143 66.4
BcaNung00560 Brassica carinata HOM05D005031 ORTHO05D006098 7.1e-50 201.1 172 59.3
BcaNung00561 Brassica carinata HOM05D005031 ORTHO05D006098 7.1e-50 201.1 172 59.3
C07p57970 Brassica napus HOM05D005031 ORTHO05D006098 7.1e-50 201.1 172 59.3
BolC7t46255H Brassica oleracea HOM05D005031 ORTHO05D006098 7.1e-50 201.1 172 59.3
CANSAT11G2524 Cannabis sativa HOM05D005031 ORTHO05D006098 9.3e-50 200.7 171 59.1
ClCG11G012690 Citrullus lanatus HOM05D005031 ORTHO05D006098 9.3e-50 200.7 172 61.6
THA.LOC104803530 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 9.3e-50 200.7 171 60.2
Sp7g28380 Schrenkiella parvula HOM05D005031 ORTHO05D006098 1.2e-49 200.3 172 58.7
A03p59910 Brassica napus HOM05D005031 ORTHO05D006098 2.1e-49 199.5 172 58.7
Eucgr.H00166 Eucalyptus grandis HOM05D005031 ORTHO05D006098 2.1e-49 199.5 171 57.9
Lalb_Chr07g0180011 Lupinus albus HOM05D005031 ORTHO05D006098 3.5e-49 198.7 172 58.7
HPP92_025776 Vanilla planifolia HOM05D005031 ORTHO05D006098 3.5e-49 198.7 171 60.2
BraA03t15048Z Brassica rapa HOM05D005031 ORTHO05D006098 4.6e-49 198.4 172 58.1
PSO675G4517 Papaver somniferum HOM05D005031 ORTHO05D006098 4.6e-49 198.4 172 57.6
Aa31LG2G20010 Aethionema arabicum HOM05D005031 ORTHO05D006098 6.1e-49 198.0 172 57.6
CARHR184610 Cardamine hirsuta HOM05D005031 ORTHO05D006098 7.9e-49 197.6 171 60.8
Aqoxy5G00990 Aquilegia oxysepala HOM05D005031 ORTHO05D006098 2.3e-48 196.1 173 63.0
Sabra18G0087000 Salix brachista HOM05D005031 ORTHO05D006098 2.3e-48 196.1 191 54.5
CDE05G2574 Ceratophyllum demersum HOM05D005031 ORTHO05D006098 3.0e-48 195.7 172 57.6
TWI23G1034 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 3.0e-48 195.7 156 61.5
C01p08550 Brassica napus HOM05D005031 ORTHO05D006098 1.1e-47 193.7 171 56.7
Lj4g0007960 Lotus japonicus HOM05D005031 ORTHO05D006098 2.5e-47 192.6 172 55.8
A01p07680 Brassica napus HOM05D005031 ORTHO05D006098 4.3e-47 191.8 171 56.7
BraA01t00711Z Brassica rapa HOM05D005031 ORTHO05D006098 4.3e-47 191.8 171 56.7
BcaC09g51840 Brassica carinata HOM05D005031 ORTHO05D006098 1.3e-46 190.3 171 56.7
arahy.Tifrunner.gnm1.ann1.0TL0BP Arachis hypogaea HOM05D005031 ORTHO05D006098 1.6e-46 189.9 195 52.8
AL7G21640 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 2.4e-45 186.0 172 54.1
MBI14_g16418_MAGBIO Magnolia biondii HOM05D005031 ORTHO05D006098 3.1e-45 185.7 144 63.9
BolC1t00831H Brassica oleracea HOM05D005031 ORTHO05D006098 9.0e-45 184.1 164 57.9
BolC1t00837H Brassica oleracea HOM05D005031 ORTHO05D006098 9.0e-45 184.1 164 57.9
AT4G30500 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 3.4e-44 182.2 172 54.1
Hma1.2p1_2725F.1_g327560 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 1.3e-43 180.3 122 70.5
BolC1t00834H Brassica oleracea HOM05D005031 ORTHO05D006098 5.0e-43 178.3 147 60.5
Sc05g0001840 Simmondsia chinensis HOM05D005031 ORTHO05D006098 1.1e-42 177.2 122 66.4
AUR62001168 Chenopodium quinoa HOM05D005031 ORTHO05D006098 1.0e-40 170.6 179 57.0
Os02g0666800 Oryza sativa ssp. japonica HOM05D005031 ORTHO05D006098 2.3e-40 169.5 172 55.8
Psat0s2826g0160 Pisum sativum HOM05D005031 ORTHO05D006098 1.1e-39 167.2 122 65.6
AagrBONN_evm.TU.Sc2ySwM_368.3216 Anthoceros agrestis HOM05D005031 ORTHO05D006098 2.5e-39 166.0 171 53.8
Lsat_1_v5_gn_5_88201 Lactuca sativa HOM05D005031 ORTHO05D006098 2.5e-39 166.0 173 50.3
Sed0023066 Sechium edule HOM05D005031 ORTHO05D006098 1.7e-38 163.3 149 53.7
Mapoly0003s0226 Marchantia polymorpha HOM05D005031 ORTHO05D006098 1.7e-35 153.3 174 45.4
CBR_g3690 Chara braunii HOM05D005031 ORTHO05D006098 1.4e-34 150.2 175 48.0
SMO164G0234 Selaginella moellendorffii HOM05D005031 ORTHO05D006098 4.2e-34 148.7 171 43.3
Pp3c11_17250 Physcomitrium patens HOM05D005031 ORTHO05D006098 3.0e-32 142.5 176 45.5
Ah.08g218880 Amaranthus hybridus HOM05D005031 ORTHO05D006098 3.1e-29 132.5 94 64.9
Haze_21256 Corylus avellana HOM05D005031 ORTHO05D006098 5.3e-29 131.7 95 64.2
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 7.0e-29 131.3 94 63.8
Cpa.g.sc743.3 Carica papaya HOM05D005031 ORTHO05D006098 1.9e-26 123.2 93 62.4
Lj7A465G52 Lonicera japonica HOM05D005031 ORTHO05D006098 1.4e-24 117.1 67 77.6
BcaNung01743 Brassica carinata HOM05D005031 ORTHO05D006098 9.7e-23 110.9 97 56.7
unitig_62.g23488 Utricularia gibba HOM05D005031 ORTHO05D006098 1.0e-19 100.9 82 72.0
Cre02.g096850 Chlamydomonas reinhardtii HOM05D005031 ORTHO05D006098 1.5e-18 97.1 130 40.0
CARHR238390 Cardamine hirsuta HOM05D005031 ORTHO05D006098 1.2e-17 94.0 97 45.4
BcaB04g19089 Brassica carinata HOM05D005031 ORTHO05D006098 1.6e-17 93.6 75 58.7
BcaB08g34788 Brassica carinata HOM05D005031 ORTHO05D006098 4.8e-14 82.0 76 56.6
MCO15G043 Micromonas commoda HOM05D005031 ORTHO05D006098 6.3e-14 81.6 132 39.4
MELO3C020438.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.1e-13 80.9 55 63.6
MELO3C010414.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.4e-13 80.5 53 66.0
MELO3C032992.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.1e-10 70.9 48 62.5
Rhsim03G0261000 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.5e-10 70.5 80 46.2
MELO3C033057.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.2e-09 67.4 38 71.1


User provided reference genes

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