Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012608 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 7.8e-110 400.6 219 100.0
CSS0026839 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 2.1e-75 286.2 208 72.6
CSS0046970 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 3.1e-74 282.3 208 71.6
Actinidia28725 Actinidia chinensis HOM05D006745 ORTHO05D008449 8.1e-67 257.7 208 65.9
Rhsim08G0031100 Rhododendron simsii HOM05D006745 ORTHO05D008449 1.3e-64 250.4 205 64.4
vmacro18434 Vaccinium macrocarpon HOM05D006745 ORTHO05D008449 2.9e-64 249.2 205 63.4
GSVIVG01007224001 Vitis vinifera HOM05D006745 ORTHO05D008449 4.6e-62 241.9 209 64.1
Prupe.7G173600 Prunus persica HOM05D006745 ORTHO05D008449 1.0e-61 240.7 179 68.7
RcHm_v2.0_Chr2g0098641 Rosa chinensis HOM05D006745 ORTHO05D008449 1.1e-60 237.3 206 61.7
Cfa007050 Carpinus fangiana HOM05D006745 ORTHO05D008449 1.5e-60 236.9 205 62.0
Potri.005G109000 Populus trichocarpa HOM05D006745 ORTHO05D008449 2.5e-60 236.1 197 65.5
Manes.01G150100 Manihot esculenta HOM05D006745 ORTHO05D008449 4.3e-60 235.3 203 62.6
Sopen02g012910 Solanum pennellii HOM05D006745 ORTHO05D008449 5.7e-60 235.0 213 58.7
FAN19G0356 Fragaria x ananassa HOM05D006745 ORTHO05D008449 1.3e-59 233.8 196 61.7
TWI73G1304 Tripterygium wilfordii HOM05D006745 ORTHO05D008449 1.3e-59 233.8 194 64.4
QL06p051396 Quercus lobata HOM05D006745 ORTHO05D008449 1.6e-59 233.4 196 64.8
Ciclev10026368m.g Citrus clementina HOM05D006745 ORTHO05D008449 2.8e-59 232.6 198 62.6
MD15G1238900 Malus domestica HOM05D006745 ORTHO05D008449 6.3e-59 231.5 197 61.4
Solyc02g061950.4 Solanum lycopersicum HOM05D006745 ORTHO05D008449 6.3e-59 231.5 204 59.3
HanXRQChr16g0531741 Helianthus annuus HOM05D006745 ORTHO05D008449 1.1e-58 230.7 206 59.2
FAN23G2677 Fragaria x ananassa HOM05D006745 ORTHO05D008449 2.4e-58 229.6 197 61.9
Thecc.01G012900 Theobroma cacao HOM05D006745 ORTHO05D008449 2.4e-58 229.6 192 63.5
Gohir.A11G041100 Gossypium hirsutum HOM05D006745 ORTHO05D008449 3.1e-58 229.2 208 58.2
Lj2A482T63 Lonicera japonica HOM05D006745 ORTHO05D008449 3.1e-58 229.2 204 59.8
Sabra05G0089300 Salix brachista HOM05D006745 ORTHO05D008449 5.3e-58 228.4 190 64.7
CANSAT01G0215 Cannabis sativa HOM05D006745 ORTHO05D008449 6.9e-58 228.0 196 63.3
AUR62003702 Chenopodium quinoa HOM05D006745 ORTHO05D008449 9.0e-58 227.6 214 58.9
Duzib147G0156 Durio zibethinus HOM05D006745 ORTHO05D008449 9.0e-58 227.6 178 65.7
Gohir.D11G044400 Gossypium hirsutum HOM05D006745 ORTHO05D008449 1.2e-57 227.3 208 57.2
Gorai.007G047700 Gossypium raimondii HOM05D006745 ORTHO05D008449 1.2e-57 227.3 208 57.2
FAN26G1827 Fragaria x ananassa HOM05D006745 ORTHO05D008449 1.5e-57 226.9 197 60.9
Sc22g0002270 Simmondsia chinensis HOM05D006745 ORTHO05D008449 4.5e-57 225.3 201 56.7
PGSC0003DMG401023885 Solanum tuberosum HOM05D006745 ORTHO05D008449 4.5e-57 225.3 204 57.4
Cc07_g11200 Coffea canephora HOM05D006745 ORTHO05D008449 5.9e-57 224.9 190 60.5
Eucgr.I02315 Eucalyptus grandis HOM05D006745 ORTHO05D008449 1.0e-56 224.2 194 60.8
MELO3C007934.2 Cucumis melo HOM05D006745 ORTHO05D008449 1.7e-56 223.4 195 60.0
A09p13970 Brassica napus HOM05D006745 ORTHO05D008449 5.0e-56 221.9 206 58.7
CsaV3_6G047410 Cucumis sativus L. HOM05D006745 ORTHO05D008449 6.5e-56 221.5 195 59.5
Lsat_1_v5_gn_3_71521 Lactuca sativa HOM05D006745 ORTHO05D008449 6.5e-56 221.5 202 58.4
AL2G11270 Arabidopsis lyrata HOM05D006745 ORTHO05D008449 8.5e-56 221.1 198 59.6
EL10Ac6g15168 Beta vulgaris HOM05D006745 ORTHO05D008449 8.5e-56 221.1 197 59.4
CAN.G576.2 Capsicum annuum HOM05D006745 ORTHO05D008449 8.5e-56 221.1 205 58.5
arahy.Tifrunner.gnm1.ann1.DU2BQF Arachis hypogaea HOM05D006745 ORTHO05D008449 1.1e-55 220.7 208 58.2
arahy.Tifrunner.gnm1.ann1.EE1FTG Arachis hypogaea HOM05D006745 ORTHO05D008449 1.1e-55 220.7 208 58.2
BcaC04g22678 Brassica carinata HOM05D006745 ORTHO05D008449 1.4e-55 220.3 194 60.8
BolC9t54579H Brassica oleracea HOM05D006745 ORTHO05D008449 1.4e-55 220.3 194 60.8
THA.LOC104817830 Tarenaya hassleriana HOM05D006745 ORTHO05D008449 1.9e-55 219.9 193 60.6
Nn6g31942 Nelumbo nucifera HOM05D006745 ORTHO05D008449 2.5e-55 219.5 196 57.7
Phvul.002G105300 Phaseolus vulgaris HOM05D006745 ORTHO05D008449 2.5e-55 219.5 198 60.1
Nitab4.5_0000188g0160 Nicotiana tabacum HOM05D006745 ORTHO05D008449 3.2e-55 219.2 234 49.6
BcaB07g31542 Brassica carinata HOM05D006745 ORTHO05D008449 5.5e-55 218.4 206 56.8
Oeu058205.1 Olea europaea HOM05D006745 ORTHO05D008449 5.5e-55 218.4 205 60.5
Oeu058207.1 Olea europaea HOM05D006745 ORTHO05D008449 5.5e-55 218.4 205 60.5
VMungo1215G1582 Vigna mungo HOM05D006745 ORTHO05D008449 5.5e-55 218.4 202 60.4
Ca_24936_v3 Cicer arietinum L. HOM05D006745 ORTHO05D008449 7.2e-55 218.0 200 58.5
Aa31LG2G1020 Aethionema arabicum HOM05D006745 ORTHO05D008449 1.6e-54 216.9 199 58.3
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 2.1e-54 216.5 202 56.9
Carub.0002s0099 Capsella rubella HOM05D006745 ORTHO05D008449 2.7e-54 216.1 195 59.0
Ah.02g123330 Amaranthus hybridus HOM05D006745 ORTHO05D008449 3.6e-54 215.7 200 60.0
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 3.6e-54 215.7 217 54.8
PGR119G0426 Punica granatum HOM05D006745 ORTHO05D008449 3.6e-54 215.7 206 56.8
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 4.6e-54 215.3 208 55.8
Glyma.01G163200 Glycine max HOM05D006745 ORTHO05D008449 6.1e-54 214.9 208 57.2
TPR.G25110 Trifolium pratense HOM05D006745 ORTHO05D008449 7.9e-54 214.5 206 55.3
Lj2g0007566 Lotus japonicus HOM05D006745 ORTHO05D008449 1.3e-53 213.8 196 57.7
Migut.N00678 Erythranthe guttata HOM05D006745 ORTHO05D008449 1.8e-53 213.4 198 58.1
Psat2g152400 Pisum sativum HOM05D006745 ORTHO05D008449 3.0e-53 212.6 206 54.9
DCAR_023133 Daucus carota HOM05D006745 ORTHO05D008449 3.9e-53 212.2 208 56.7
Medtr5g022860 Medicago truncatula HOM05D006745 ORTHO05D008449 3.9e-53 212.2 206 54.4
Sed0008453 Sechium edule HOM05D006745 ORTHO05D008449 5.1e-53 211.8 195 56.4
ECA246G0119 Erigeron canadensis HOM05D006745 ORTHO05D008449 1.9e-52 209.9 200 57.5
Peaxi162Scf00439g00049 Petunia axillaris HOM05D006745 ORTHO05D008449 4.3e-52 208.8 252 48.8
BcaC04g22675 Brassica carinata HOM05D006745 ORTHO05D008449 9.7e-52 207.6 208 56.2
SGA_v2.0_scaffold77G25309 Striga asiatica HOM05D006745 ORTHO05D008449 9.7e-52 207.6 195 58.5
ATR0661G256 Amborella trichopoda HOM05D006745 ORTHO05D008449 4.8e-51 205.3 209 52.6
ClCG01G020530 Citrullus lanatus HOM05D006745 ORTHO05D008449 6.3e-51 204.9 222 51.8
CiPaw.07G062000 Carya illinoinensis HOM05D006745 ORTHO05D008449 8.2e-51 204.5 202 58.9
Os02g0120300 Oryza sativa ssp. japonica HOM05D006745 ORTHO05D008449 1.8e-50 203.4 210 52.9
HPP92_012950 Vanilla planifolia HOM05D006745 ORTHO05D008449 5.3e-50 201.8 210 51.9
Zm00001eb229980 Zea mays HOM05D006745 ORTHO05D008449 9.1e-50 201.1 207 53.1
Aqoxy6G02103 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 1.2e-49 200.7 199 55.3
Lalb_Chr09g0321491 Lupinus albus HOM05D006745 ORTHO05D008449 2.9e-48 196.1 204 54.9
unitig_60.g25574 Utricularia gibba HOM05D006745 ORTHO05D008449 9.4e-47 191.0 246 46.3
Atru.chr3.895 Acer truncatum HOM05D006745 ORTHO05D008449 3.0e-45 186.0 184 57.1
AUR62018011 Chenopodium quinoa HOM05D006745 ORTHO05D008449 1.5e-44 183.7 184 58.2
Thhalv10023706m.g Eutrema salsugineum HOM05D006745 ORTHO05D008449 9.7e-44 181.0 182 54.9
Sp2g00830 Schrenkiella parvula HOM05D006745 ORTHO05D008449 1.3e-43 180.6 175 54.9
AT1G63855 Arabidopsis thaliana HOM05D006745 ORTHO05D008449 8.2e-43 177.9 170 56.5
Atru.chr3.884 Acer truncatum HOM05D006745 ORTHO05D008449 1.5e-41 173.7 166 57.8
Pp3c3_3178 Physcomitrium patens HOM05D006745 ORTHO05D008449 1.4e-39 167.2 186 45.7
FAN28G2493 Fragaria x ananassa HOM05D006745 ORTHO05D008449 7.2e-39 164.9 198 50.5
Pp3c3_3170 Physcomitrium patens HOM05D006745 ORTHO05D008449 1.4e-37 160.6 203 41.9
Aqoxy278s001 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 3.0e-37 159.5 191 49.7
SalBow3G1250 Salvia bowleyana HOM05D006745 ORTHO05D008449 1.1e-36 157.5 188 49.5
FvH4_1g11230 Fragaria vesca HOM05D006745 ORTHO05D008449 6.3e-35 151.8 148 55.4
Mapoly0041s0084 Marchantia polymorpha HOM05D006745 ORTHO05D008449 1.4e-34 150.6 196 42.9
Nitab4.5_0002337g0130 Nicotiana tabacum HOM05D006745 ORTHO05D008449 1.2e-33 147.5 186 44.6
SMO340G0117 Selaginella moellendorffii HOM05D006745 ORTHO05D008449 1.2e-33 147.5 194 41.8
Glyma.02G164500 Glycine max HOM05D006745 ORTHO05D008449 1.6e-33 147.1 167 49.1
CDE05G1799 Ceratophyllum demersum HOM05D006745 ORTHO05D008449 2.0e-33 146.7 161 50.3
CARHR047310 Cardamine hirsuta HOM05D006745 ORTHO05D008449 2.9e-32 142.9 150 52.7
Sed0011409 Sechium edule HOM05D006745 ORTHO05D008449 1.5e-31 140.6 223 42.2
CARHR047280 Cardamine hirsuta HOM05D006745 ORTHO05D008449 1.1e-26 124.4 103 62.1
MSTRG.17961 Avicennia marina HOM05D006745 ORTHO05D008449 1.4e-26 124.0 96 65.6
Medtr3g096570 Medicago truncatula HOM05D006745 ORTHO05D008449 1.3e-24 117.5 109 57.8
Medtr3g096562 Medicago truncatula HOM05D006745 ORTHO05D008449 2.2e-24 116.7 210 38.6
Cpa.g.sc29.52 Carica papaya HOM05D006745 ORTHO05D008449 3.8e-24 115.9 88 63.6
BraA09t37044Z Brassica rapa HOM05D006745 ORTHO05D008449 9.4e-23 111.3 88 61.4
arahy.Tifrunner.gnm1.ann1.N8WRPV Arachis hypogaea HOM05D006745 ORTHO05D008449 6.1e-22 108.6 127 51.2
SEGI_40099 Sequoiadendron giganteum HOM05D006745 ORTHO05D008449 1.8e-18 97.1 88 54.5
COL.COLO4_22483 Corchorus olitorius HOM05D006745 ORTHO05D008449 2.8e-14 83.2 51 76.5
Rhsim01G0268300 Rhododendron simsii HOM05D006745 ORTHO05D008449 3.6e-14 82.8 63 66.7
Medtr2g078490 Medicago truncatula HOM05D006745 ORTHO05D008449 3.7e-11 72.8 100 42.0
Glyma.11G080201 Glycine max HOM05D006745 ORTHO05D008449 2.7e-09 66.6 44 63.6


User provided reference genes

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