Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 8.2e-103 377.1 194 100.0
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 2.0e-69 266.2 195 71.8
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 1.2e-61 240.4 199 68.8
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 1.3e-60 236.9 202 68.3
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.1e-58 229.6 197 67.5
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 1.7e-55 219.9 253 54.9
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 9.2e-54 214.2 210 60.5
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 2.7e-53 212.6 201 63.2
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 4.5e-53 211.8 200 60.0
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 5.0e-52 208.4 201 59.2
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 2.5e-51 206.1 209 55.0
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 3.3e-51 205.7 203 59.1
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 4.3e-51 205.3 208 56.7
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 2.1e-50 203.0 198 59.6
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 2.1e-50 203.0 196 60.2
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 4.7e-50 201.8 221 55.2
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.4e-49 200.3 204 58.3
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 4.0e-49 198.7 203 60.1
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 2.0e-48 196.4 200 59.0
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 5.7e-48 194.9 185 59.5
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 2.9e-47 192.6 200 58.0
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 2.9e-47 192.6 227 51.1
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 1.1e-46 190.7 207 57.5
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 1.4e-46 190.3 216 53.7
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 3.2e-46 189.1 202 58.9
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 4.1e-46 188.7 198 55.1
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 4.1e-46 188.7 200 56.0
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 4.1e-46 188.7 209 54.5
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 9.2e-46 187.6 193 56.5
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 1.6e-45 186.8 195 55.4
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 3.5e-45 185.7 200 57.0
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 4.6e-45 185.3 198 55.6
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 7.8e-45 184.5 200 56.0
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 3.0e-44 182.6 193 57.0
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 5.0e-44 181.8 198 53.5
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 8.6e-44 181.0 200 56.0
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 1.1e-43 180.6 199 55.3
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 1.1e-43 180.6 210 51.9
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.5e-43 180.3 201 55.7
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 1.5e-43 180.3 209 52.2
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 5.6e-43 178.3 206 53.4
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 5.6e-43 178.3 212 50.9
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 9.5e-43 177.6 201 55.2
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 9.5e-43 177.6 216 50.9
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 1.2e-42 177.2 220 49.5
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 1.2e-42 177.2 198 54.5
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 1.6e-42 176.8 208 51.9
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 6.2e-42 174.9 198 53.5
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 1.8e-41 173.3 198 54.0
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 5.2e-41 171.8 198 52.5
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 5.2e-41 171.8 216 48.6
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 8.9e-41 171.0 199 52.8
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 2.0e-40 169.9 198 52.0
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 2.6e-40 169.5 207 49.8
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 2.6e-40 169.5 146 63.0
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 2.6e-40 169.5 227 48.0
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 3.4e-40 169.1 207 50.2
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 4.4e-40 168.7 198 51.0
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 4.4e-40 168.7 207 50.2
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 4.4e-40 168.7 198 53.0
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 4.9e-39 165.2 152 61.2
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 1.1e-38 164.1 213 48.8
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 2.4e-38 162.9 208 48.1
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 2.4e-38 162.9 208 48.1
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 2.4e-38 162.9 229 48.0
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 3.2e-38 162.5 211 48.3
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 4.1e-38 162.2 208 47.6
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 5.4e-38 161.8 196 50.0
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 5.4e-38 161.8 211 47.4
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 1.6e-37 160.2 211 46.0
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 2.0e-37 159.8 207 49.8
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 2.7e-37 159.5 201 46.3
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 4.6e-37 158.7 203 48.3
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 4.6e-37 158.7 144 59.0
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 1.0e-36 157.5 205 51.2
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 1.0e-36 157.5 201 48.3
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 1.3e-36 157.1 196 49.5
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 1.7e-36 156.8 205 48.8
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 2.3e-36 156.4 200 47.0
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 3.0e-36 156.0 222 47.3
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 3.0e-36 156.0 211 49.8
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 3.9e-36 155.6 211 46.4
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 1.5e-35 153.7 202 45.0
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 2.1e-34 149.8 209 45.9
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 2.1e-34 149.8 202 46.5
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.1e-33 147.5 150 54.7
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 5.2e-33 145.2 195 46.2
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 8.9e-33 144.4 210 45.7
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 3.4e-32 142.5 146 55.5
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 9.8e-32 141.0 212 45.8
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 8.3e-31 137.9 207 44.4
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 1.1e-30 137.5 118 61.9
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 7.1e-30 134.8 140 53.6
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 7.1e-30 134.8 162 51.9
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 9.5e-27 124.4 125 54.4
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 9.9e-24 114.4 123 51.2
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 4.1e-22 109.0 197 41.1
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 4.1e-22 109.0 190 41.6
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 6.0e-21 105.1 194 37.1
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 1.2e-16 90.9 117 47.9
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 3.9e-12 75.9 79 57.0
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 8.7e-12 74.7 89 51.7
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 1.8e-09 67.0 85 47.1
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 7.1e-06 55.1 159 26.4


User provided reference genes

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