Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012600 Camellia sinensis var. sinensis HOM05D000148 ORTHO05D110371 1.2e-109 399.8 195 100.0
CSS0012658 Camellia sinensis var. sinensis HOM05D000148 ORTHO05D000081 1.1e-22 110.9 321 29.6
CSS0009008 Camellia sinensis var. sinensis HOM05D000148 ORTHO05D000081 9.3e-22 107.8 321 29.3
CSS0046567 Camellia sinensis var. sinensis HOM05D000148 ORTHO05D000081 2.7e-21 106.3 322 28.3
CSS0050091 Camellia sinensis var. sinensis HOM05D000148 ORTHO05D000081 1.2e-16 90.9 337 27.6
Rhsim12G0106600 Rhododendron simsii HOM05D000148 ORTHO05D000081 2.4e-14 83.2 306 25.8
COL.COLO4_23590 Corchorus olitorius HOM05D000148 ORTHO05D000081 9.3e-14 81.3 188 27.7
CiPaw.05G173800 Carya illinoinensis HOM05D000148 ORTHO05D000081 2.5e-11 73.2 308 24.4
Duzib268G0273 Durio zibethinus HOM05D000148 ORTHO05D000081 6.2e-10 68.6 308 24.0
Duzib268G0121 Durio zibethinus HOM05D000148 ORTHO05D000081 8.2e-10 68.2 321 23.4
Oeu056700.1 Olea europaea HOM05D000148 ORTHO05D000081 3.1e-09 66.2 173 31.2
Dinv14784 Davidia involucrata HOM05D000148 ORTHO05D000081 5.3e-09 65.5 303 24.1
Haze_12320 Corylus avellana HOM05D000148 ORTHO05D000081 6.9e-09 65.1 205 26.8
Dinv14783 Davidia involucrata HOM05D000148 ORTHO05D000081 9.0e-09 64.7 176 31.8
FAN12G3826 Fragaria x ananassa HOM05D000148 ORTHO05D000081 9.0e-09 64.7 328 22.6
Lj6P819T41 Lonicera japonica HOM05D000148 ORTHO05D000081 9.0e-09 64.7 160 30.6
FvH4_4g24670 Fragaria vesca HOM05D000148 ORTHO05D000081 1.2e-08 64.3 328 22.6
CiPaw.05G173700 Carya illinoinensis HOM05D000148 ORTHO05D000081 1.5e-08 63.9 158 29.7
vmacro01095 Vaccinium macrocarpon HOM05D000148 ORTHO05D000081 1.5e-08 63.9 142 31.7
Prupe.1G237100 Prunus persica HOM05D000148 ORTHO05D000081 2.0e-08 63.5 310 22.9
Cc11_g16420 Coffea canephora HOM05D000148 ORTHO05D000081 2.6e-08 63.2 159 28.9
DCAR_032273 Daucus carota HOM05D000148 ORTHO05D000081 3.4e-08 62.8 185 28.1
FAN17G0002 Fragaria x ananassa HOM05D000148 ORTHO05D000081 4.5e-08 62.4 328 22.3
Dinv04841 Davidia involucrata HOM05D000148 ORTHO05D000081 7.6e-08 61.6 72 43.1
Dinv14782 Davidia involucrata HOM05D000148 ORTHO05D000081 7.6e-08 61.6 175 30.3
FAN17G0289 Fragaria x ananassa HOM05D000148 ORTHO05D000081 7.6e-08 61.6 143 33.6
FvH4_5g06140 Fragaria vesca HOM05D000148 ORTHO05D000081 1.0e-07 61.2 183 29.5
FAN07G0193 Fragaria x ananassa HOM05D000148 ORTHO05D000081 1.0e-07 61.2 328 22.3
FAN13G2485 Fragaria x ananassa HOM05D000148 ORTHO05D000081 1.0e-07 61.2 183 29.5
FAN18G2910 Fragaria x ananassa HOM05D000148 ORTHO05D000081 1.0e-07 61.2 183 29.5
FAN07G1826 Fragaria x ananassa HOM05D000148 ORTHO05D000081 1.3e-07 60.8 328 21.3
Gohir.A03G130100 Gossypium hirsutum HOM05D000148 ORTHO05D000081 1.3e-07 60.8 154 26.0
Gohir.A10G175100 Gossypium hirsutum HOM05D000148 ORTHO05D000081 1.3e-07 60.8 149 27.5
RcHm_v2.0_Chr4g0431791 Rosa chinensis HOM05D000148 ORTHO05D000081 1.3e-07 60.8 334 22.8
Thecc.02G271500 Theobroma cacao HOM05D000148 ORTHO05D000081 1.3e-07 60.8 164 26.8
Cfa005302 Carpinus fangiana HOM05D000148 ORTHO05D000081 1.7e-07 60.5 214 24.3
Duzib251G0688 Durio zibethinus HOM05D000148 ORTHO05D000081 1.7e-07 60.5 146 29.5
Prupe.1G236500 Prunus persica HOM05D000148 ORTHO05D000081 1.7e-07 60.5 300 23.0
RcHm_v2.0_Chr4g0431801 Rosa chinensis HOM05D000148 ORTHO05D000081 1.7e-07 60.5 321 20.9
RcHm_v2.0_Chr4g0431871 Rosa chinensis HOM05D000148 ORTHO05D000081 1.7e-07 60.5 304 22.0
Eucgr.B03225 Eucalyptus grandis HOM05D000148 ORTHO05D000081 2.2e-07 60.1 163 28.8
FvH4_4g24680 Fragaria vesca HOM05D000148 ORTHO05D000081 2.2e-07 60.1 143 32.9
FAN12G2968 Fragaria x ananassa HOM05D000148 ORTHO05D000081 2.2e-07 60.1 143 32.9
Gohir.A04G137900 Gossypium hirsutum HOM05D000148 ORTHO05D000081 2.2e-07 60.1 178 28.7
Dinv02926 Davidia involucrata HOM05D000148 ORTHO05D000081 2.9e-07 59.7 65 44.6
FAN04G1184 Fragaria x ananassa HOM05D000026 ORTHO05D000094 2.9e-07 59.7 184 28.8
Gorai.005G172900 Gossypium raimondii HOM05D000148 ORTHO05D000081 2.9e-07 59.7 154 26.0
Actinidia13016 Actinidia chinensis HOM05D000148 ORTHO05D000081 3.8e-07 59.3 87 43.7
FvH4_4g24790 Fragaria vesca HOM05D000148 ORTHO05D000081 3.8e-07 59.3 304 22.4
Gohir.D02G153800 Gossypium hirsutum HOM05D000148 ORTHO05D000081 3.8e-07 59.3 154 26.6
QL03p055464 Quercus lobata HOM05D000148 ORTHO05D000081 3.8e-07 59.3 159 27.0
Rhsim12G0036300 Rhododendron simsii HOM05D000148 ORTHO05D000081 4.9e-07 58.9 156 28.8
Sc21g0000940 Simmondsia chinensis HOM05D000148 ORTHO05D000081 4.9e-07 58.9 86 39.5
Nitab4.5_0002775g0010 Nicotiana tabacum HOM05D000148 ORTHO05D000081 6.5e-07 58.5 66 42.4
Thecc.02G271100 Theobroma cacao HOM05D000148 ORTHO05D000081 6.5e-07 58.5 309 22.3
Haze_12328 Corylus avellana HOM05D000148 ORTHO05D000081 8.4e-07 58.2 161 26.7
FAN12G0104 Fragaria x ananassa HOM05D000148 ORTHO05D000081 1.1e-06 57.8 304 22.0
Gohir.D10G181500 Gossypium hirsutum HOM05D000148 ORTHO05D000081 1.1e-06 57.8 164 26.2
Gorai.011G203000 Gossypium raimondii HOM05D000148 ORTHO05D000081 1.1e-06 57.8 164 26.2
QL03p055550 Quercus lobata HOM05D000148 ORTHO05D000081 1.1e-06 57.8 97 38.1
TPR.G33402 Trifolium pratense HOM05D000148 ORTHO05D000081 1.1e-06 57.8 302 22.8
Dinv02927 Davidia involucrata HOM05D000148 ORTHO05D000081 1.4e-06 57.4 72 41.7
Duzib268G0234 Durio zibethinus HOM05D000148 ORTHO05D000081 1.4e-06 57.4 143 29.4
Nitab4.5_0001108g0010 Nicotiana tabacum HOM05D000148 ORTHO05D000081 1.4e-06 57.4 66 42.4
CANSAT01G1670 Cannabis sativa HOM05D000148 ORTHO05D000081 1.9e-06 57.0 58 43.1
Nitab4.5_0000041g0360 Nicotiana tabacum HOM05D000148 ORTHO05D000081 1.9e-06 57.0 147 26.5
Dinv11006 Davidia involucrata HOM05D000148 ORTHO05D000081 2.5e-06 56.6 160 28.8
FAN07G0565 Fragaria x ananassa HOM05D000148 ORTHO05D000081 2.5e-06 56.6 304 22.0
Gohir.D07G101701 Gossypium hirsutum HOM05D000148 ORTHO05D000081 2.5e-06 56.6 293 21.8
Duzib251G0674 Durio zibethinus HOM05D000148 ORTHO05D000081 4.2e-06 55.8 143 30.8
Eucgr.B03226 Eucalyptus grandis HOM05D000148 ORTHO05D000081 4.2e-06 55.8 162 25.3
CANSAT01G2281 Cannabis sativa HOM05D000148 ORTHO05D000081 5.5e-06 55.5 64 40.6
Peaxi162Scf00536g00420 Petunia axillaris HOM05D000148 ORTHO05D000081 5.5e-06 55.5 68 42.6
Cfa009293 Carpinus fangiana HOM05D000148 ORTHO05D000081 7.1e-06 55.1 145 24.8
COL.COLO4_23584 Corchorus olitorius HOM05D000148 ORTHO05D000081 7.1e-06 55.1 143 28.0
MD13G1109000 Malus domestica HOM05D000148 ORTHO05D000081 7.1e-06 55.1 309 23.6
Prupe.1G236400 Prunus persica HOM05D000148 ORTHO05D000081 7.1e-06 55.1 76 35.5
TWI18G0804 Tripterygium wilfordii HOM05D000148 ORTHO05D000081 7.1e-06 55.1 58 43.1
Cfa009292 Carpinus fangiana HOM05D000148 ORTHO05D000081 9.3e-06 54.7 177 25.4
FAN08G2032 Fragaria x ananassa HOM05D000148 ORTHO05D000081 9.3e-06 54.7 183 27.9
FAN22G2345 Fragaria x ananassa HOM05D000148 ORTHO05D000081 9.3e-06 54.7 304 21.7
MD13G1109400 Malus domestica HOM05D000148 ORTHO05D000081 9.3e-06 54.7 76 34.2
MD16G1108700 Malus domestica HOM05D000148 ORTHO05D000081 9.3e-06 54.7 309 22.7


User provided reference genes

Program Settings