Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012549 Camellia sinensis var. sinensis HOM05D024150 ORTHO05D004526 2.3e-84 315.5 156 100.0
CSS0047596 Camellia sinensis var. sinensis HOM05D024150 ORTHO05D004526 1.8e-60 236.1 163 74.8
CSS0017341 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.0e-14 83.2 72 56.9
CSS0027439 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.8e-13 79.3 56 66.1
CSS0010192 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 6.3e-13 78.2 67 53.7
CSS0048160 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 8.2e-13 77.8 89 44.9
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 1.0e-10 70.9 73 45.2
CSS0002063 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.7e-10 70.1 60 53.3
LjContig00564g0012597 Lotus japonicus HOM05D001013 ORTHO05D001703 3.8e-10 68.9 63 44.4
Atru.chr4.889 Acer truncatum HOM05D000593 ORTHO05D000562 6.5e-10 68.2 86 43.0
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 1.1e-09 67.4 86 41.9
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 1.9e-09 66.6 102 37.3
CsaV3_6G052370 Cucumis sativus L. HOM05D000169 ORTHO05D007693 1.9e-09 66.6 72 41.7
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 3.2e-09 65.9 97 38.1
Dinv16416 Davidia involucrata HOM05D000593 ORTHO05D000562 4.2e-09 65.5 70 47.1
Atru.chr7.1229 Acer truncatum HOM05D000593 ORTHO05D000562 7.2e-09 64.7 74 43.2
FvH4_4g16651 Fragaria vesca HOM05D000593 ORTHO05D004526 9.4e-09 64.3 70 45.7
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 9.4e-09 64.3 66 48.5
TWI09G0942 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.2e-08 63.9 68 42.6
Ca_13826_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.1e-08 63.2 65 46.2
Ca_27089_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.1e-08 63.2 65 44.6
FvH4_5g20623 Fragaria vesca HOM05D000593 ORTHO05D000562 2.1e-08 63.2 93 32.3
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 2.1e-08 63.2 78 42.3
Ca_14191_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.7e-08 62.8 65 46.2
Ca_22767_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.7e-08 62.8 65 46.2
Ca_04248_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 3.6e-08 62.4 66 45.5
Aqoxy4G01994 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 4.7e-08 62.0 97 34.0
Ca_23807_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 4.7e-08 62.0 65 46.2
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 4.7e-08 62.0 66 48.5
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.7e-08 62.0 66 43.9
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.0e-07 60.8 50 58.0
CSS0019614 Camellia sinensis var. sinensis HOM05D024150 ORTHO05D000562 1.0e-07 60.8 70 42.9
CSS0027150 Camellia sinensis var. sinensis HOM05D024150 ORTHO05D000562 1.0e-07 60.8 70 42.9
Ca_19793_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.0e-07 60.8 66 43.9
TWI15G1013 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.0e-07 60.8 80 37.5
Atru.chr1.1796 Acer truncatum HOM05D000593 ORTHO05D000562 1.4e-07 60.5 61 47.5
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 1.4e-07 60.5 61 47.5
FvH4_6g12552 Fragaria vesca HOM05D000593 ORTHO05D000562 1.4e-07 60.5 71 40.8
Atru.chr2.2322 Acer truncatum HOM05D000593 ORTHO05D000562 1.8e-07 60.1 73 39.7
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.8e-07 60.1 50 56.0
Ca_04412_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.8e-07 60.1 65 44.6
Ca_05378_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.8e-07 60.1 74 40.5
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 1.8e-07 60.1 67 44.8
TWI73G0387 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.8e-07 60.1 85 38.8
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.8e-07 60.1 85 37.6
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.3e-07 59.7 50 58.0
Ca_12893_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.3e-07 59.7 65 44.6
Ca_23077_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.3e-07 59.7 65 43.1
Ca_25309_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.3e-07 59.7 71 43.7
Atru.chr1.3005 Acer truncatum HOM05D000593 ORTHO05D000562 3.0e-07 59.3 73 45.2
CSS0025640 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.0e-07 59.3 50 56.0
Ca_02614_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 3.0e-07 59.3 66 43.9
Ca_26592_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 3.0e-07 59.3 65 43.1
TWI38G2130 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.0e-07 58.9 79 38.0
Lj9C298T5 Lonicera japonica HOM05D000593 ORTHO05D000562 5.2e-07 58.5 66 45.5
TWI14G0920 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.2e-07 58.5 87 36.8
TWI59G0448 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.2e-07 58.5 75 40.0
Ca_02918_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 6.7e-07 58.2 65 44.6
Ca_02920_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 6.7e-07 58.2 65 44.6
FAN04G0185 Fragaria x ananassa HOM05D000593 ORTHO05D000562 6.7e-07 58.2 62 46.8
CSS0038609 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 8.8e-07 57.8 51 54.9
TWI38G0345 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 8.8e-07 57.8 79 38.0
Ca_07465_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.2e-06 57.4 65 44.6
TWI59G1113 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.2e-06 57.4 80 36.2
PSO386G0211 Papaver somniferum HOM05D000593 ORTHO05D000562 1.5e-06 57.0 92 30.4
TWI36G1214 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.0e-06 56.6 63 42.9
CSS0044639 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.6e-06 56.2 49 55.1
PSO063G7547 Papaver somniferum HOM05D000593 ORTHO05D000562 2.6e-06 56.2 65 41.5
PSO782G4983 Papaver somniferum HOM05D000593 ORTHO05D000562 2.6e-06 56.2 65 41.5
Ca_05086_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 3.3e-06 55.8 65 41.5
Ca_26665_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 4.4e-06 55.5 63 39.7
PSO724G1093 Papaver somniferum HOM05D000593 ORTHO05D000562 4.4e-06 55.5 92 30.4
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 4.4e-06 55.5 56 39.3
Atru.chr11.23 Acer truncatum HOM05D000593 ORTHO05D000562 5.7e-06 55.1 69 42.0
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 5.7e-06 55.1 61 45.9
Aqoxy2G01165 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 5.7e-06 55.1 89 32.6
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 5.7e-06 55.1 89 32.6
Ca_04645_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 5.7e-06 55.1 65 38.5
Ca_07511_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 7.5e-06 54.7 65 41.5
TWI73G0077 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 7.5e-06 54.7 83 36.1
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 9.7e-06 54.3 55 40.0


User provided reference genes

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