Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012529 Camellia sinensis var. sinensis HOM05D005399 ORTHO05D006347 1.6e-213 745.7 363 100.0
Actinidia34263 Actinidia chinensis HOM05D005399 ORTHO05D006347 1.6e-147 526.6 361 74.2
vmacro06433 Vaccinium macrocarpon HOM05D005399 ORTHO05D006347 1.6e-139 500.0 355 72.1
Lj3C896G2 Lonicera japonica HOM05D005399 ORTHO05D006347 2.5e-129 466.1 356 65.2
Hma1.2p1_0094F.1_g047320 Hydrangea macrophylla HOM05D005399 ORTHO05D006347 8.6e-122 441.0 354 63.0
TAR629G1213 Trochodendron aralioides HOM05D005399 ORTHO05D006347 1.6e-120 436.8 359 60.4
Nn3g18028 Nelumbo nucifera HOM05D005399 ORTHO05D006347 3.8e-101 372.5 355 53.5
Dinv29217 Davidia involucrata HOM05D005399 ORTHO05D006347 1.2e-99 367.5 251 74.9
Aqoxy5G00909 Aquilegia oxysepala HOM05D005399 ORTHO05D006347 3.2e-84 316.2 357 48.5
EL10Ac3g05189 Beta vulgaris HOM05D005399 ORTHO05D006347 1.9e-81 307.0 364 46.2
AUR62035614 Chenopodium quinoa HOM05D005399 ORTHO05D006347 1.6e-80 303.9 367 44.1
Hund09706 Selenicereus undatus HOM05D005399 ORTHO05D006347 6.9e-79 298.5 362 44.8
ATR1089G058 Amborella trichopoda HOM05D005399 ORTHO05D006347 1.2e-70 271.2 359 41.5
Dinv07613 Davidia involucrata HOM05D005399 ORTHO05D006347 2.9e-69 266.5 159 80.5
Duzib205G1241 Durio zibethinus HOM05D005399 ORTHO05D006347 6.5e-69 265.4 214 62.1
CiPaw.05G203600 Carya illinoinensis HOM05D005399 ORTHO05D006347 7.9e-67 258.5 229 55.9
Cc11_g00230 Coffea canephora HOM05D005399 ORTHO05D006347 1.0e-66 258.1 209 60.3
Cfa016169 Carpinus fangiana HOM05D005399 ORTHO05D006347 1.4e-66 257.7 212 62.7
DCAR_008979 Daucus carota HOM05D005399 ORTHO05D006347 1.4e-66 257.7 250 54.4
QL09p007265 Quercus lobata HOM05D005399 ORTHO05D006347 3.9e-66 256.1 246 55.7
Oeu037969.1 Olea europaea HOM05D005399 ORTHO05D006347 5.1e-66 255.8 183 70.5
HanXRQChr01g0023961 Helianthus annuus HOM05D005399 ORTHO05D006347 8.8e-66 255.0 208 59.6
Haze_00285 Corylus avellana HOM05D005399 ORTHO05D006347 1.1e-65 254.6 189 66.7
Thecc.03G207700 Theobroma cacao HOM05D005399 ORTHO05D006347 1.7e-64 250.8 216 59.7
COL.COLO4_14362 Corchorus olitorius HOM05D005399 ORTHO05D006347 1.1e-63 248.1 214 59.3
Gohir.A08G105050 Gossypium hirsutum HOM05D005399 ORTHO05D006347 1.1e-63 248.1 193 62.7
Potri.012G021900 Populus trichocarpa HOM05D005399 ORTHO05D006347 3.1e-63 246.5 247 53.4
TWI39G1122 Tripterygium wilfordii HOM05D005399 ORTHO05D006347 3.1e-63 246.5 235 54.5
CDE04G3617 Ceratophyllum demersum HOM05D005399 ORTHO05D006347 5.3e-63 245.7 367 38.7
GSVIVG01038634001 Vitis vinifera HOM05D005399 ORTHO05D006347 5.3e-63 245.7 148 77.0
Lsat_1_v5_gn_7_13681 Lactuca sativa HOM05D005399 ORTHO05D006347 4.5e-62 242.7 191 64.9
Sabra12G0011800 Salix brachista HOM05D005399 ORTHO05D006347 5.9e-62 242.3 212 57.5
Sc19g0000620 Simmondsia chinensis HOM05D005399 ORTHO05D006347 5.9e-62 242.3 248 51.2
Sabra05G0139800 Salix brachista HOM05D005399 ORTHO05D006347 1.7e-61 240.7 212 57.1
Peaxi162Scf00526g00516 Petunia axillaris HOM05D005399 ORTHO05D006347 3.8e-61 239.6 202 60.9
CAN.G65.216 Capsicum annuum HOM05D005399 ORTHO05D006347 5.0e-61 239.2 220 59.5
PGSC0003DMG400005917 Solanum tuberosum HOM05D005399 ORTHO05D006347 5.0e-61 239.2 220 58.2
Gorai.004G124900 Gossypium raimondii HOM05D005399 ORTHO05D006347 8.5e-61 238.4 197 60.4
ECA236G2916 Erigeron canadensis HOM05D005399 ORTHO05D006347 1.1e-60 238.0 192 61.5
HanXRQChr15g0470151 Helianthus annuus HOM05D005399 ORTHO05D006347 5.5e-60 235.7 210 58.1
SGA_v2.0_scaffold18G08460 Striga asiatica HOM05D005399 ORTHO05D006347 5.5e-60 235.7 206 57.8
Gohir.D08G116000 Gossypium hirsutum HOM05D005399 ORTHO05D006347 7.2e-60 235.3 197 59.9
PSO063G2915 Papaver somniferum HOM05D005399 ORTHO05D006347 1.6e-59 234.2 355 43.1
RcHm_v2.0_Chr4g0412561 Rosa chinensis HOM05D005399 ORTHO05D006347 2.1e-59 233.8 217 57.1
Rhsim03G0214700 Rhododendron simsii HOM05D005399 ORTHO05D006347 1.0e-58 231.5 177 72.9
PGR102G0827 Punica granatum HOM05D005399 ORTHO05D006347 2.3e-58 230.3 223 53.8
Sopen06g030090 Solanum pennellii HOM05D005399 ORTHO05D006347 6.7e-58 228.8 236 53.4
CANSAT21G1620 Cannabis sativa HOM05D005399 ORTHO05D006347 8.8e-58 228.4 278 45.3
MD04G1021200 Malus domestica HOM05D005399 ORTHO05D006347 1.1e-57 228.0 257 47.1
FvH4_4g12930 Fragaria vesca HOM05D005399 ORTHO05D006347 2.0e-57 227.3 189 60.8
Solyc06g073690.2 Solanum lycopersicum HOM05D005399 ORTHO05D006347 2.6e-57 226.9 209 57.9
FAN07G0819 Fragaria x ananassa HOM05D005399 ORTHO05D006347 4.4e-57 226.1 189 60.8
Ciclev10018828m.g Citrus clementina HOM05D005399 ORTHO05D006347 2.2e-56 223.8 158 67.7
FAN12G2064 Fragaria x ananassa HOM05D005399 ORTHO05D006347 2.8e-56 223.4 189 59.8
MD10G1005500 Malus domestica HOM05D005399 ORTHO05D006347 2.8e-56 223.4 258 49.6
CsaV3_2G029520 Cucumis sativus L. HOM05D005399 ORTHO05D006347 2.4e-55 220.3 197 54.8
Eucgr.H04750 Eucalyptus grandis HOM05D005399 ORTHO05D006347 3.1e-55 219.9 185 54.1
PSO782G2701 Papaver somniferum HOM05D005399 ORTHO05D006347 3.1e-55 219.9 355 39.4
THA.LOC104803340 Tarenaya hassleriana HOM05D005399 ORTHO05D006347 1.7e-53 214.2 186 57.0
ClCG08G014290 Citrullus lanatus HOM05D005399 ORTHO05D006347 5.0e-53 212.6 151 64.9
Lalb_Chr03g0034521 Lupinus albus HOM05D005399 ORTHO05D006347 6.5e-53 212.2 154 63.6
MSTRG.26983 Avicennia marina HOM05D005399 ORTHO05D006347 1.4e-52 211.1 209 55.0
MELO3C011011.2 Cucumis melo HOM05D005399 ORTHO05D006347 3.2e-52 209.9 214 51.4
AL5G29160 Arabidopsis lyrata HOM05D005399 ORTHO05D006347 7.2e-52 208.8 209 53.1
Migut.F00156 Erythranthe guttata HOM05D005399 ORTHO05D006347 1.2e-51 208.0 211 55.0
Lj5g0008235 Lotus japonicus HOM05D005399 ORTHO05D006347 1.2e-51 208.0 158 62.7
Lj4g0025583 Lotus japonicus HOM05D005399 ORTHO05D006347 1.6e-51 207.6 151 64.2
CARHR158370 Cardamine hirsuta HOM05D005399 ORTHO05D006347 2.1e-51 207.2 233 49.4
Sed0017875 Sechium edule HOM05D005399 ORTHO05D006347 8.0e-51 205.3 206 52.9
AT3G49400 Arabidopsis thaliana HOM05D005399 ORTHO05D006347 1.0e-50 204.9 209 53.1
Os01g0702400 Oryza sativa ssp. japonica HOM05D005399 ORTHO05D006347 1.0e-50 204.9 188 54.8
Carub.0005s1567 Capsella rubella HOM05D005399 ORTHO05D006347 2.0e-49 200.7 148 62.2
Zm00001eb211870 Zea mays HOM05D005399 ORTHO05D006347 2.6e-49 200.3 147 65.3
Aa31LG4G17950 Aethionema arabicum HOM05D005399 ORTHO05D006347 4.4e-49 199.5 187 55.6
Glyma.10G094100 Glycine max HOM05D005399 ORTHO05D006347 7.4e-49 198.7 168 57.1
BcaB05g23117 Brassica carinata HOM05D005399 ORTHO05D006347 2.2e-48 197.2 186 53.2
Medtr5g077160 Medicago truncatula HOM05D005399 ORTHO05D006347 3.7e-48 196.4 151 58.9
Sp5g12670 Schrenkiella parvula HOM05D005399 ORTHO05D006347 3.7e-48 196.4 213 49.3
Phvul.004G128800 Phaseolus vulgaris HOM05D005399 ORTHO05D006347 6.3e-48 195.7 167 56.9
BolC1t03020H Brassica oleracea HOM05D005399 ORTHO05D006347 1.1e-47 194.9 218 47.7
Medtr1g059090 Medicago truncatula HOM05D005399 ORTHO05D006347 1.1e-47 194.9 161 57.1
C01p30860 Brassica napus HOM05D005399 ORTHO05D006347 2.4e-47 193.7 218 47.2
Psat2g044800 Pisum sativum HOM05D005399 ORTHO05D006347 2.4e-47 193.7 142 63.4
A01p24740 Brassica napus HOM05D005399 ORTHO05D006347 3.1e-47 193.4 215 48.8
VMungo1080G0063 Vigna mungo HOM05D005399 ORTHO05D006347 4.1e-47 193.0 158 58.2
BraA01t02386Z Brassica rapa HOM05D005399 ORTHO05D006347 7.0e-47 192.2 215 48.4
VMungo0464G0254 Vigna mungo HOM05D005399 ORTHO05D006347 1.2e-46 191.4 143 62.2
TPR.G18894 Trifolium pratense HOM05D005399 ORTHO05D006347 5.9e-46 189.1 158 55.7
arahy.Tifrunner.gnm1.ann1.GD33A2 Arachis hypogaea HOM05D005399 ORTHO05D006347 3.8e-45 186.4 142 59.2
arahy.Tifrunner.gnm1.ann1.MB6KVE Arachis hypogaea HOM05D005399 ORTHO05D006347 3.8e-45 186.4 142 59.2
arahy.Tifrunner.gnm1.ann1.CBX7CP Arachis hypogaea HOM05D005399 ORTHO05D006347 5.0e-45 186.0 142 59.9
SalBow6G2741 Salvia bowleyana HOM05D005399 ORTHO05D006347 8.5e-45 185.3 208 50.5
Atru.chr12.2405 Acer truncatum HOM05D005399 ORTHO05D006347 9.4e-44 181.8 188 49.5
SalBow1G5593 Salvia bowleyana HOM05D005399 ORTHO05D006347 1.6e-43 181.0 208 49.5
SalBow1G6622 Salvia bowleyana HOM05D005399 ORTHO05D006347 8.0e-43 178.7 208 48.6
Ca_27344_v3 Cicer arietinum L. HOM05D005399 ORTHO05D006347 3.0e-42 176.8 142 58.5
Nitab4.5_0002184g0080 Nicotiana tabacum HOM05D005399 ORTHO05D006347 4.1e-39 166.4 210 46.2
Thhalv10010115m.g Eutrema salsugineum HOM05D005399 ORTHO05D006347 9.1e-39 165.2 181 48.6
AagrBONN_evm.TU.Sc2ySwM_117.1095 Anthoceros agrestis HOM05D005399 ORTHO05D006347 7.7e-38 162.2 355 31.5
Mapoly0079s0055 Marchantia polymorpha HOM05D005399 ORTHO05D006347 2.5e-36 157.1 156 48.7
SalBow1G2085 Salvia bowleyana HOM05D005399 ORTHO05D006347 5.5e-36 156.0 156 53.2
Cpa.g.sc13.113 Carica papaya HOM05D005399 ORTHO05D006347 2.3e-34 150.6 247 42.1
SMO170G0037 Selaginella moellendorffii HOM05D005399 ORTHO05D006347 4.4e-33 146.4 146 49.3
Pp3c18_13210 Physcomitrium patens HOM05D005399 ORTHO05D006347 2.2e-32 144.1 136 50.7
BcaC09g49950 Brassica carinata HOM05D005399 ORTHO05D006347 1.2e-30 138.3 106 60.4
CBR_g20108 Chara braunii HOM05D001969 ORTHO05D003463 5.9e-30 136.0 142 45.1
MD10G1005800 Malus domestica HOM05D005399 ORTHO05D006347 8.9e-26 122.1 95 58.9
Manes.01G042700 Manihot esculenta HOM05D005399 ORTHO05D006347 1.2e-25 121.7 221 38.5
Prupe.1G170200 Prunus persica HOM05D005399 ORTHO05D006347 4.4e-25 119.8 76 71.1
SEGI_00776 Sequoiadendron giganteum HOM05D005399 ORTHO05D006347 1.8e-23 114.4 123 50.4
arahy.Tifrunner.gnm1.ann1.61K3C5 Arachis hypogaea HOM05D005399 ORTHO05D006347 1.6e-22 111.3 80 58.8
AUR62006012 Chenopodium quinoa HOM05D005399 ORTHO05D006347 9.8e-17 92.0 137 38.7
Nitab4.5_0000271g0170 Nicotiana tabacum HOM05D005399 ORTHO05D006347 2.9e-16 90.5 102 46.1
unitig_749.g13730 Utricularia gibba HOM05D005399 ORTHO05D006347 6.4e-16 89.4 148 39.9
Ah.09g232770 Amaranthus hybridus HOM05D005399 ORTHO05D006347 1.0e-13 82.0 109 37.6
MCO09G305 Micromonas commoda HOM05D005399 ORTHO05D006347 4.7e-11 73.2 213 29.6
Glyma.14G156200 Glycine max HOM05D005399 ORTHO05D006347 1.1e-10 72.0 79 41.8
arahy.Tifrunner.gnm1.ann1.JN7TNN Arachis hypogaea HOM05D005399 ORTHO05D006347 4.0e-10 70.1 52 53.8
arahy.Tifrunner.gnm1.ann1.QKC624 Arachis hypogaea HOM05D005399 ORTHO05D006347 4.0e-10 70.1 52 53.8
arahy.Tifrunner.gnm1.ann1.F3K4LC Arachis hypogaea HOM05D005399 ORTHO05D006347 5.8e-09 66.2 49 53.1
SHI24230 Sapria himalayana HOM05D005399 ORTHO05D006347 6.0e-06 56.2 39 71.8


User provided reference genes

Program Settings