Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.6e-74 282.7 145 100.0
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.4e-68 260.8 145 92.4
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.0e-67 257.3 145 91.0
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.6e-65 250.4 143 90.2
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.6e-65 250.4 143 90.2
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 6.8e-62 240.7 143 86.0
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.9e-62 240.4 145 89.0
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 2.9e-60 235.3 143 83.9
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 2.1e-58 229.2 143 81.8
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.0e-57 226.9 143 81.1
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 1.0e-57 226.9 143 80.4
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 3.9e-57 224.9 143 79.0
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 3.9e-57 224.9 143 81.1
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 3.9e-57 224.9 143 79.0
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 5.1e-57 224.6 143 81.1
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 6.6e-57 224.2 143 79.7
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 8.6e-57 223.8 143 80.4
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 1.1e-56 223.4 143 77.6
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.5e-56 223.0 143 77.6
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 2.5e-56 222.2 143 80.4
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 4.3e-56 221.5 144 79.9
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 4.3e-56 221.5 143 79.7
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 9.5e-56 220.3 143 76.9
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.2e-55 219.9 143 76.9
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.2e-55 219.9 143 76.9
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 2.1e-55 219.2 143 77.6
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 2.1e-55 219.2 143 77.6
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 2.8e-55 218.8 143 76.9
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 4.7e-55 218.0 143 76.9
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 4.7e-55 218.0 143 76.9
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 6.2e-55 217.6 143 76.2
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 6.2e-55 217.6 143 77.6
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 1.1e-54 216.9 143 76.9
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 1.1e-54 216.9 143 75.5
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.4e-54 216.5 143 76.2
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 1.8e-54 216.1 143 77.6
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 2.4e-54 215.7 143 76.2
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 2.4e-54 215.7 143 76.2
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 5.2e-54 214.5 143 76.9
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 6.8e-54 214.2 143 76.9
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 6.8e-54 214.2 143 75.5
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 8.9e-54 213.8 143 75.5
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 8.9e-54 213.8 143 78.3
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 1.2e-53 213.4 143 74.1
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 1.2e-53 213.4 143 74.8
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.5e-53 213.0 143 74.8
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 2.6e-53 212.2 131 84.0
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 2.6e-53 212.2 143 76.2
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 2.6e-53 212.2 143 76.2
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 2.6e-53 212.2 143 74.8
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 4.4e-53 211.5 143 73.4
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 4.4e-53 211.5 144 72.9
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 5.8e-53 211.1 143 74.1
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 5.8e-53 211.1 143 73.4
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 7.6e-53 210.7 143 76.2
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 7.6e-53 210.7 143 73.4
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.3e-52 209.9 143 72.7
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 2.2e-52 209.1 143 72.0
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 6.4e-52 207.6 144 72.9
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 1.1e-51 206.8 144 71.5
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 1.4e-51 206.5 142 73.2
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 1.4e-51 206.5 143 75.5
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 2.4e-51 205.7 143 72.7
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 2.4e-51 205.7 143 72.7
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 5.4e-51 204.5 143 72.7
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 5.4e-51 204.5 143 73.4
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 7.1e-51 204.1 144 71.5
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 7.1e-51 204.1 127 81.1
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 1.6e-50 203.0 143 71.3
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.6e-50 203.0 143 69.9
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 3.5e-50 201.8 143 71.3
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 3.9e-49 198.4 144 70.1
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 3.9e-49 198.4 143 71.3
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 5.1e-49 198.0 144 68.8
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 5.1e-49 198.0 141 70.9
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 8.7e-49 197.2 145 69.7
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 8.7e-49 197.2 145 71.0
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 1.5e-48 196.4 145 68.3
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 3.3e-48 195.3 145 70.3
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 9.6e-48 193.7 142 71.8
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 1.6e-47 193.0 144 69.4
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 1.6e-47 193.0 145 69.7
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 1.6e-47 193.0 145 68.3
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 1.6e-47 193.0 145 68.3
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 1.6e-47 193.0 145 69.0
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 2.1e-47 192.6 145 68.3
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 2.8e-47 192.2 145 67.6
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 3.6e-47 191.8 145 66.9
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 6.2e-47 191.0 143 70.6
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 8.1e-47 190.7 145 69.0
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 3.1e-46 188.7 145 66.2
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 3.1e-46 188.7 145 66.2
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 3.1e-46 188.7 160 63.8
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 4.0e-46 188.3 142 70.4
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 4.4e-45 184.9 143 65.0
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 3.2e-43 178.7 143 65.7
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.1e-40 170.2 143 62.9
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 1.5e-40 169.9 143 63.6
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 4.0e-38 161.8 144 63.2
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 4.5e-37 158.3 144 60.4
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 2.9e-36 155.6 146 60.3
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 3.2e-35 152.1 142 59.2
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 8.7e-33 144.1 142 56.3
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 7.4e-32 141.0 144 56.9
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 7.4e-32 141.0 144 56.9
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.6e-32 140.6 81 90.1
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 5.8e-29 131.3 132 53.0
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 6.4e-28 127.9 132 55.3
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.0e-25 120.6 141 48.2
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 8.7e-25 117.5 133 49.6
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 7.4e-24 114.4 136 52.2
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.7e-23 112.1 137 50.4
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 3.1e-22 109.0 85 67.1
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.1e-19 100.5 132 44.7
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 1.5e-16 90.1 137 42.3
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 9.7e-16 87.4 145 38.6
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 2.2e-15 86.3 131 42.0
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.4e-09 67.0 129 35.7
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 2.8e-07 59.3 41 61.0


User provided reference genes

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