Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012488 Camellia sinensis var. sinensis HOM05D001967 ORTHO05D001929 1.9e-104 382.5 190 100.0
Dinv29128 Davidia involucrata HOM05D001967 ORTHO05D001929 2.0e-29 133.3 86 80.2
HanXRQChr16g0512721 Helianthus annuus HOM05D001967 ORTHO05D001929 4.5e-29 132.1 81 81.5
Cc02_g00130 Coffea canephora HOM05D001967 ORTHO05D001929 1.7e-28 130.2 81 81.5
Lsat_1_v5_gn_9_47781 Lactuca sativa HOM05D001967 ORTHO05D001929 2.9e-28 129.4 81 81.5
Dinv17245 Davidia involucrata HOM05D001967 ORTHO05D001929 1.4e-27 127.1 81 79.0
CSS0024609 Camellia sinensis var. sinensis HOM05D001967 ORTHO05D001929 2.5e-27 126.3 81 84.0
CSS0032084 Camellia sinensis var. sinensis HOM05D001967 ORTHO05D001929 3.2e-27 125.9 78 82.1
ECA232G3630 Erigeron canadensis HOM05D001967 ORTHO05D001929 4.2e-27 125.6 81 77.8
PGR042G0812 Punica granatum HOM05D001967 ORTHO05D001929 4.6e-26 122.1 82 78.0
Thecc.05G222200 Theobroma cacao HOM05D001967 ORTHO05D001929 4.6e-26 122.1 82 78.0
ClCG09G017260 Citrullus lanatus HOM05D001967 ORTHO05D001929 7.9e-26 121.3 82 76.8
Lalb_Chr05g0211201 Lupinus albus HOM05D001967 ORTHO05D001929 7.9e-26 121.3 89 74.2
SalBow2G3444 Salvia bowleyana HOM05D001967 ORTHO05D001929 7.9e-26 121.3 81 76.5
Oeu046978.1 Olea europaea HOM05D001967 ORTHO05D001929 1.0e-25 120.9 80 78.8
Prupe.2G328900 Prunus persica HOM05D001967 ORTHO05D001929 1.0e-25 120.9 84 75.0
Sed0025867 Sechium edule HOM05D001967 ORTHO05D001929 1.0e-25 120.9 82 76.8
Cfa016072 Carpinus fangiana HOM05D001967 ORTHO05D001929 1.3e-25 120.6 82 76.8
Potri.013G078100 Populus trichocarpa HOM05D001967 ORTHO05D001929 1.8e-25 120.2 82 76.8
Potri.019G041700 Populus trichocarpa HOM05D001967 ORTHO05D001929 1.8e-25 120.2 89 71.9
Sabra13G0067100 Salix brachista HOM05D001967 ORTHO05D001929 1.8e-25 120.2 82 75.6
FvH4_7g34210 Fragaria vesca HOM05D001967 ORTHO05D001929 3.0e-25 119.4 82 75.6
FAN01G1266 Fragaria x ananassa HOM05D001967 ORTHO05D001929 3.0e-25 119.4 82 75.6
FAN03G1573 Fragaria x ananassa HOM05D001967 ORTHO05D001929 3.0e-25 119.4 82 75.6
FAN10G2385 Fragaria x ananassa HOM05D001967 ORTHO05D001929 3.0e-25 119.4 82 75.6
RcHm_v2.0_Chr1g0384571 Rosa chinensis HOM05D001967 ORTHO05D001929 3.0e-25 119.4 82 75.6
GSVIVG01024331001 Vitis vinifera HOM05D001967 ORTHO05D001929 3.0e-25 119.4 82 76.8
Peaxi162Scf00133g00525 Petunia axillaris HOM05D001967 ORTHO05D001929 3.9e-25 119.0 81 74.1
MD07G1310700 Malus domestica HOM05D001967 ORTHO05D001929 5.1e-25 118.6 82 75.6
CiPaw.05G213200 Carya illinoinensis HOM05D001967 ORTHO05D001929 6.7e-25 118.2 82 75.6
Manes.08G161240 Manihot esculenta HOM05D001967 ORTHO05D001929 6.7e-25 118.2 82 75.6
DCAR_009026 Daucus carota HOM05D001967 ORTHO05D001929 1.1e-24 117.5 81 72.8
Hma1.2p1_0419F.1_g149490 Hydrangea macrophylla HOM05D001967 ORTHO05D001929 1.1e-24 117.5 81 77.8
VMungo1215G2959 Vigna mungo HOM05D001967 ORTHO05D001929 1.1e-24 117.5 89 71.9
CANSAT21G0930 Cannabis sativa HOM05D001967 ORTHO05D001929 1.5e-24 117.1 82 73.2
Migut.F00932 Erythranthe guttata HOM05D001967 ORTHO05D001929 1.5e-24 117.1 82 74.4
QL09p020820 Quercus lobata HOM05D001967 ORTHO05D001929 1.5e-24 117.1 82 74.4
Glyma.01G234200 Glycine max HOM05D001967 ORTHO05D001929 1.9e-24 116.7 82 75.6
Glyma.11G008700 Glycine max HOM05D001967 ORTHO05D001929 1.9e-24 116.7 82 75.6
TWI34G0142 Tripterygium wilfordii HOM05D001967 ORTHO05D001929 1.9e-24 116.7 82 74.4
Cpa.g.sc43.127 Carica papaya HOM05D001967 ORTHO05D001929 2.5e-24 116.3 83 75.9
Gohir.A13G157300 Gossypium hirsutum HOM05D001967 ORTHO05D001929 2.5e-24 116.3 82 74.4
Gohir.D13G162100 Gossypium hirsutum HOM05D001967 ORTHO05D001929 2.5e-24 116.3 82 74.4
Manes.09G129400 Manihot esculenta HOM05D001967 ORTHO05D001929 2.5e-24 116.3 82 74.4
Nitab4.5_0000021g0830 Nicotiana tabacum HOM05D001967 ORTHO05D001929 2.5e-24 116.3 106 64.2
Nitab4.5_0005968g0010 Nicotiana tabacum HOM05D001967 ORTHO05D001929 4.3e-24 115.5 106 62.3
TWI60G1608 Tripterygium wilfordii HOM05D001967 ORTHO05D001929 4.3e-24 115.5 82 74.4
Ciclev10033542m.g Citrus clementina HOM05D001967 ORTHO05D001929 7.4e-24 114.8 78 76.9
Sabra19G0052100 Salix brachista HOM05D001967 ORTHO05D001929 7.4e-24 114.8 80 73.8
TAR636G1479 Trochodendron aralioides HOM05D001967 ORTHO05D001929 7.4e-24 114.8 82 76.8
arahy.Tifrunner.gnm1.ann1.A9GYM3 Arachis hypogaea HOM05D001967 ORTHO05D001929 9.7e-24 114.4 77 76.6
arahy.Tifrunner.gnm1.ann1.BYM2EW Arachis hypogaea HOM05D001967 ORTHO05D001929 9.7e-24 114.4 77 76.6
CiPaw.06G035900 Carya illinoinensis HOM05D001967 ORTHO05D001929 1.3e-23 114.0 77 74.0
TAR629G0880 Trochodendron aralioides HOM05D001967 ORTHO05D001929 1.6e-23 113.6 82 75.6
Gorai.013G184100 Gossypium raimondii HOM05D001967 ORTHO05D001929 2.2e-23 113.2 82 73.2
MSTRG.8557 Avicennia marina HOM05D001967 ORTHO05D001929 2.8e-23 112.8 79 74.7
LjContig00222g0009289 Lotus japonicus HOM05D001967 ORTHO05D001929 2.8e-23 112.8 82 73.2
MELO3C021897.2 Cucumis melo HOM05D001967 ORTHO05D001929 4.8e-23 112.1 83 72.3
MD01G1238800 Malus domestica HOM05D001967 ORTHO05D001929 4.8e-23 112.1 83 73.5
Actinidia33615 Actinidia chinensis HOM05D001189 ORTHO05D001027 6.3e-23 111.7 110 57.3
Ca_24430_v3 Cicer arietinum L. HOM05D001967 ORTHO05D001929 6.3e-23 111.7 82 72.0
Gohir.D11G318300 Gossypium hirsutum HOM05D001967 ORTHO05D001929 8.2e-23 111.3 82 72.0
Gorai.007G348300 Gossypium raimondii HOM05D001967 ORTHO05D001929 8.2e-23 111.3 82 72.0
unitig_736.g22837 Utricularia gibba HOM05D001967 ORTHO05D001929 8.2e-23 111.3 81 70.4
Sc13g0010980 Simmondsia chinensis HOM05D001967 ORTHO05D001929 1.4e-22 110.5 82 70.7
Solyc03g097250.4 Solanum lycopersicum HOM05D001967 ORTHO05D001929 1.4e-22 110.5 82 70.7
PGSC0003DMG400026488 Solanum tuberosum HOM05D001967 ORTHO05D001929 1.4e-22 110.5 82 70.7
Gohir.A11G303000 Gossypium hirsutum HOM05D001967 ORTHO05D001929 3.1e-22 109.4 82 69.5
Nn1g00514 Nelumbo nucifera HOM05D001967 ORTHO05D001929 3.1e-22 109.4 77 75.3
COL.COLO4_15148 Corchorus olitorius HOM05D001967 ORTHO05D001929 4.1e-22 109.0 95 65.3
Gorai.003G057200 Gossypium raimondii HOM05D001967 ORTHO05D001929 5.3e-22 108.6 82 70.7
Sopen03g028000 Solanum pennellii HOM05D001967 ORTHO05D001929 5.3e-22 108.6 82 69.5
Lj3A884G47 Lonicera japonica HOM05D001967 ORTHO05D001929 6.9e-22 108.2 81 66.7
Sed0008334 Sechium edule HOM05D001967 ORTHO05D001929 9.0e-22 107.8 82 69.5
CDE06G0145 Ceratophyllum demersum HOM05D001967 ORTHO05D001929 1.3e-20 104.0 80 70.0
PSO063G7129 Papaver somniferum HOM05D001967 ORTHO05D001929 1.3e-20 104.0 83 71.1
AUR62002090 Chenopodium quinoa HOM05D001967 ORTHO05D001929 1.7e-20 103.6 83 68.7
ATR0049G035 Amborella trichopoda HOM05D001967 ORTHO05D001929 2.2e-20 103.2 138 44.9
Gohir.A02G126500 Gossypium hirsutum HOM05D001967 ORTHO05D001929 2.2e-20 103.2 82 70.7
Aqoxy3G02387 Aquilegia oxysepala HOM05D001967 ORTHO05D001929 2.9e-20 102.8 82 67.1
EL10Ac3g05046 Beta vulgaris HOM05D001967 ORTHO05D001929 5.0e-20 102.1 83 68.7
PSO782G0197 Papaver somniferum HOM05D001967 ORTHO05D001929 6.5e-20 101.7 83 69.9
THA.LOC104820904 Tarenaya hassleriana HOM05D001967 ORTHO05D001929 1.1e-19 100.9 91 63.7
Hund09809 Selenicereus undatus HOM05D001967 ORTHO05D001929 1.9e-19 100.1 83 66.3
TPR.G37921 Trifolium pratense HOM05D001967 ORTHO05D001929 1.9e-19 100.1 81 67.9
AUR62028208 Chenopodium quinoa HOM05D001967 ORTHO05D001929 2.5e-19 99.8 84 67.9
Duzib128G1144 Durio zibethinus HOM05D001967 ORTHO05D001929 3.2e-19 99.4 132 46.2
Duzib128G1086 Durio zibethinus HOM05D001967 ORTHO05D001929 5.5e-19 98.6 88 60.2
Lj3g0014147 Lotus japonicus HOM05D001967 ORTHO05D001929 7.2e-19 98.2 89 59.6
SGA_v2.0_scaffold50G18459 Striga asiatica HOM05D001967 ORTHO05D001929 1.2e-18 97.4 82 63.4
Phvul.002G041600 Phaseolus vulgaris HOM05D001967 ORTHO05D001929 2.1e-18 96.7 86 64.0
SGA_v2.0_scaffold59G20755 Striga asiatica HOM05D001967 ORTHO05D001929 2.1e-18 96.7 79 64.6
Medtr5g007210 Medicago truncatula HOM05D001967 ORTHO05D001929 4.6e-18 95.5 80 65.0
arahy.Tifrunner.gnm1.ann1.5UU89E Arachis hypogaea HOM05D001967 ORTHO05D001929 7.9e-18 94.7 78 65.4
MBI04_g22935_MAGBIO Magnolia biondii HOM05D001967 ORTHO05D001929 1.0e-17 94.4 77 66.2
Sp6g27490 Schrenkiella parvula HOM05D001967 ORTHO05D001929 1.0e-17 94.4 85 63.5
arahy.Tifrunner.gnm1.ann1.VDK392 Arachis hypogaea HOM05D001967 ORTHO05D001929 1.4e-17 94.0 78 65.4
CsaV3_2G014040 Cucumis sativus L. HOM05D001967 ORTHO05D001929 1.4e-17 94.0 73 64.4
Aa31LG11G12920 Aethionema arabicum HOM05D001967 ORTHO05D001929 1.8e-17 93.6 124 47.6
THA.LOC104802932 Tarenaya hassleriana HOM05D001967 ORTHO05D001929 1.8e-17 93.6 90 61.1
BcaB08g36830 Brassica carinata HOM05D001967 ORTHO05D001929 2.3e-17 93.2 82 62.2
Carub.0006s1487 Capsella rubella HOM05D001967 ORTHO05D001929 2.3e-17 93.2 92 59.8
CsaV3_2G036670 Cucumis sativus L. HOM05D001967 ORTHO05D001929 3.0e-17 92.8 73 63.0
AL6G27670 Arabidopsis lyrata HOM05D001967 ORTHO05D001929 3.9e-17 92.4 92 59.8
Psat2g154920 Pisum sativum HOM05D001967 ORTHO05D001929 6.7e-17 91.7 80 60.0
unitig_90.g27541 Utricularia gibba HOM05D001967 ORTHO05D001929 6.7e-17 91.7 94 59.6
CARHR196530 Cardamine hirsuta HOM05D001967 ORTHO05D001929 8.8e-17 91.3 92 58.7
Aa31LG5G13390 Aethionema arabicum HOM05D001967 ORTHO05D001929 1.5e-16 90.5 133 43.6
AT5G16660 Arabidopsis thaliana HOM05D001967 ORTHO05D001929 1.5e-16 90.5 92 59.8
BraA03t10114Z Brassica rapa HOM05D001967 ORTHO05D001929 2.0e-16 90.1 92 57.6
BolC9t58879H Brassica oleracea HOM05D001967 ORTHO05D001929 4.3e-16 89.0 82 59.8
A10p22550 Brassica napus HOM05D001967 ORTHO05D001929 5.7e-16 88.6 82 61.0
BraA10t44317Z Brassica rapa HOM05D001967 ORTHO05D001929 5.7e-16 88.6 82 61.0
AL3G12340 Arabidopsis lyrata HOM05D001967 ORTHO05D001929 9.7e-16 87.8 88 55.7
Thhalv10014871m.g Eutrema salsugineum HOM05D001967 ORTHO05D001929 1.3e-15 87.4 92 56.5
Rhsim03G0224100 Rhododendron simsii HOM05D001967 ORTHO05D001929 1.7e-15 87.0 92 51.1
Sp3g01950 Schrenkiella parvula HOM05D001967 ORTHO05D001929 3.7e-15 85.9 66 65.2
AT3G02900 Arabidopsis thaliana HOM05D001967 ORTHO05D001929 2.4e-14 83.2 88 53.4
Rhsim09G0213800 Rhododendron simsii HOM05D001967 ORTHO05D001929 1.2e-13 80.9 84 56.0
Carub.0003s0202 Capsella rubella HOM05D001967 ORTHO05D001929 4.5e-13 79.0 66 60.6
vmacro06375 Vaccinium macrocarpon HOM05D001967 ORTHO05D001929 1.0e-12 77.8 81 50.6
vmacro22186 Vaccinium macrocarpon HOM05D001967 ORTHO05D001929 1.0e-12 77.8 83 54.2
Peaxi162Scf00516g00521 Petunia axillaris HOM05D001967 ORTHO05D001929 5.0e-12 75.5 53 75.5
HPP92_002569 Vanilla planifolia HOM05D001967 ORTHO05D001929 9.4e-11 71.2 73 58.9
HPP92_028246 Vanilla planifolia HOM05D001967 ORTHO05D001929 1.2e-10 70.9 78 55.1
Hma1.2p1_0739F.1_g211240 Hydrangea macrophylla HOM05D001967 ORTHO05D001929 4.7e-10 68.9 46 80.4
HPP92_002588 Vanilla planifolia HOM05D001967 ORTHO05D001929 1.5e-08 63.9 64 57.8
Eucgr.A02989 Eucalyptus grandis HOM05D001967 ORTHO05D001929 2.2e-07 60.1 31 87.1


User provided reference genes

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