Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012487 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 4.8e-99 364.4 171 100.0
CSS0019957 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.6e-73 279.6 253 60.9
CSS0049229 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 4.5e-73 278.1 213 68.5
CSS0002423 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 4.3e-71 271.6 250 59.6
CSS0037116 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.8e-70 268.9 250 59.2
CSS0043283 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.9e-63 246.1 214 61.7
Actinidia22411 Actinidia chinensis HOM05D005859 ORTHO05D007576 5.6e-63 244.6 249 55.0
Haze_21816 Corylus avellana HOM05D005859 ORTHO05D007576 9.5e-63 243.8 249 53.0
Dinv07263 Davidia involucrata HOM05D005859 ORTHO05D007576 9.5e-63 243.8 249 55.0
Ciclev10009277m.g Citrus clementina HOM05D005859 ORTHO05D007576 1.2e-62 243.4 249 54.6
Rhsim05G0088100 Rhododendron simsii HOM05D005859 ORTHO05D007576 2.1e-62 242.7 249 54.2
Cfa013324 Carpinus fangiana HOM05D005859 ORTHO05D007576 4.7e-62 241.5 249 52.6
Rhsim02G0125100 Rhododendron simsii HOM05D005859 ORTHO05D007576 2.3e-61 239.2 249 54.2
QL12p026076 Quercus lobata HOM05D005859 ORTHO05D007576 3.1e-61 238.8 249 53.0
CiPaw.07G208600 Carya illinoinensis HOM05D005859 ORTHO05D007576 4.0e-61 238.4 248 53.2
Atru.chr7.2673 Acer truncatum HOM05D005859 ORTHO05D007576 1.2e-60 236.9 249 52.6
CANSAT64G2965 Cannabis sativa HOM05D005859 ORTHO05D007576 1.2e-60 236.9 250 51.6
Glyma.04G078700 Glycine max HOM05D005859 ORTHO05D007576 1.2e-60 236.9 249 53.4
ClCG08G012440 Citrullus lanatus HOM05D005859 ORTHO05D007576 2.0e-60 236.1 248 53.2
MELO3C011163.2 Cucumis melo HOM05D005859 ORTHO05D007576 2.0e-60 236.1 248 53.2
Duzib151G0554 Durio zibethinus HOM05D005859 ORTHO05D007576 2.0e-60 236.1 248 52.0
COL.COLO4_34684 Corchorus olitorius HOM05D005859 ORTHO05D007576 4.4e-60 235.0 248 51.2
CsaV3_2G031130 Cucumis sativus L. HOM05D005859 ORTHO05D007576 5.8e-60 234.6 248 52.8
Thecc.04G293600 Theobroma cacao HOM05D005859 ORTHO05D007576 7.5e-60 234.2 249 52.6
VMungo1309G0784 Vigna mungo HOM05D005859 ORTHO05D007576 1.3e-59 233.4 249 52.6
Gohir.A09G063900 Gossypium hirsutum HOM05D005859 ORTHO05D007576 1.7e-59 233.0 250 51.2
Cpa.g.sc10.203 Carica papaya HOM05D005859 ORTHO05D007576 3.7e-59 231.9 249 51.4
Prupe.1G454800 Prunus persica HOM05D005859 ORTHO05D007576 3.7e-59 231.9 248 52.4
AUR62018819 Chenopodium quinoa HOM05D005859 ORTHO05D007576 4.9e-59 231.5 218 55.0
Gohir.D09G062800 Gossypium hirsutum HOM05D005859 ORTHO05D007576 6.4e-59 231.1 248 51.2
Gorai.006G077600 Gossypium raimondii HOM05D005859 ORTHO05D007576 6.4e-59 231.1 248 51.2
Lj1g0020437 Lotus japonicus HOM05D005859 ORTHO05D007576 8.3e-59 230.7 249 51.8
Manes.08G049200 Manihot esculenta HOM05D005859 ORTHO05D007576 1.1e-58 230.3 248 52.0
Potri.006G277100 Populus trichocarpa HOM05D005859 ORTHO05D007576 1.1e-58 230.3 248 51.2
Sc10g0009100 Simmondsia chinensis HOM05D005859 ORTHO05D007576 1.1e-58 230.3 248 51.6
CSS0022235 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.4e-58 229.9 253 53.0
Sabra06G0214800 Salix brachista HOM05D005859 ORTHO05D007576 1.4e-58 229.9 248 51.2
Phvul.009G104500 Phaseolus vulgaris HOM05D005859 ORTHO05D007576 2.4e-58 229.2 249 52.2
Potri.018G003900 Populus trichocarpa HOM05D005859 ORTHO05D007576 2.4e-58 229.2 250 51.2
CSS0005155 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 4.1e-58 228.4 243 53.9
Duzib151G0446 Durio zibethinus HOM05D005859 ORTHO05D007576 4.1e-58 228.4 248 51.2
TWI63G1176 Tripterygium wilfordii HOM05D005859 ORTHO05D007576 4.1e-58 228.4 249 50.2
Sed0013908 Sechium edule HOM05D005859 ORTHO05D007576 1.2e-57 226.9 248 51.2
Ca_15630_v3 Cicer arietinum L. HOM05D005859 ORTHO05D007576 2.7e-57 225.7 249 51.0
Glyma.06G080300 Glycine max HOM05D005859 ORTHO05D007576 2.7e-57 225.7 249 51.8
Psat5g022960 Pisum sativum HOM05D005859 ORTHO05D007576 6.0e-57 224.6 248 50.0
Sed0022456 Sechium edule HOM05D005859 ORTHO05D007576 1.0e-56 223.8 248 50.8
Eucgr.A02021 Eucalyptus grandis HOM05D005859 ORTHO05D007576 1.7e-56 223.0 248 49.6
Lsat_1_v5_gn_5_41801 Lactuca sativa HOM05D005859 ORTHO05D007576 1.7e-56 223.0 248 50.8
RcHm_v2.0_Chr6g0305541 Rosa chinensis HOM05D005859 ORTHO05D007576 1.7e-56 223.0 248 50.0
MD08G1121000 Malus domestica HOM05D005859 ORTHO05D007576 3.0e-56 222.2 247 50.2
THA.LOC104814931 Tarenaya hassleriana HOM05D005859 ORTHO05D007576 3.0e-56 222.2 248 50.4
ECA238G0328 Erigeron canadensis HOM05D005859 ORTHO05D007576 3.9e-56 221.9 246 50.0
Sabra18G0001700 Salix brachista HOM05D005859 ORTHO05D007576 6.6e-56 221.1 250 50.0
Sabra18G0009500 Salix brachista HOM05D005859 ORTHO05D007576 1.5e-55 219.9 250 50.0
AUR62007184 Chenopodium quinoa HOM05D005859 ORTHO05D007576 4.3e-55 218.4 250 48.0
FvH4_2g36340 Fragaria vesca HOM05D005859 ORTHO05D007576 4.3e-55 218.4 248 49.6
FAN15G0047 Fragaria x ananassa HOM05D005859 ORTHO05D007576 4.3e-55 218.4 248 49.6
Lalb_Chr11g0064301 Lupinus albus HOM05D005859 ORTHO05D007576 4.3e-55 218.4 249 50.2
Ah.07g199340 Amaranthus hybridus HOM05D005859 ORTHO05D007576 5.6e-55 218.0 253 48.6
Oeu056039.1 Olea europaea HOM05D005859 ORTHO05D007576 5.6e-55 218.0 254 48.4
FAN20G1422 Fragaria x ananassa HOM05D005859 ORTHO05D007576 7.3e-55 217.6 248 49.2
TPR.G1368 Trifolium pratense HOM05D005859 ORTHO05D007576 1.6e-54 216.5 248 49.2
DCAR_010833 Daucus carota HOM05D005859 ORTHO05D007576 3.6e-54 215.3 248 50.4
Medtr3g109360 Medicago truncatula HOM05D005859 ORTHO05D007576 3.6e-54 215.3 248 48.8
EL10Ac5g12246 Beta vulgaris HOM05D005859 ORTHO05D007576 8.1e-54 214.2 250 48.4
TAR625G0738 Trochodendron aralioides HOM05D005859 ORTHO05D007576 6.8e-53 211.1 262 48.1
PGR042G0112 Punica granatum HOM05D005859 ORTHO05D007576 8.9e-53 210.7 248 46.8
Nn2g12765 Nelumbo nucifera HOM05D005859 ORTHO05D007576 1.3e-51 206.8 256 47.7
MD15G1100000 Malus domestica HOM05D005859 ORTHO05D007576 4.9e-51 204.9 219 51.6
CAN.G149.19 Capsicum annuum HOM05D005859 ORTHO05D007576 1.4e-50 203.4 241 48.5
CARHR188610 Cardamine hirsuta HOM05D005859 ORTHO05D007576 1.9e-50 203.0 248 46.4
Nitab4.5_0003379g0070 Nicotiana tabacum HOM05D005859 ORTHO05D007576 2.4e-50 202.6 249 47.8
Nitab4.5_0006282g0050 Nicotiana tabacum HOM05D005859 ORTHO05D007576 3.2e-50 202.2 249 48.2
Thhalv10004821m.g Eutrema salsugineum HOM05D005859 ORTHO05D007576 4.1e-50 201.8 248 45.6
A06p35610 Brassica napus HOM05D005859 ORTHO05D007576 7.1e-50 201.1 249 45.8
Solyc02g068650.2 Solanum lycopersicum HOM05D005859 ORTHO05D007576 7.1e-50 201.1 239 48.5
AL6G36490 Arabidopsis lyrata HOM05D005859 ORTHO05D007576 9.2e-50 200.7 249 46.6
MSTRG.12122 Avicennia marina HOM05D005859 ORTHO05D007576 9.2e-50 200.7 250 46.8
BolC7t44822H Brassica oleracea HOM05D005859 ORTHO05D008158 9.2e-50 200.7 249 45.4
C07p42930 Brassica napus HOM05D005859 ORTHO05D008158 1.2e-49 200.3 249 45.4
PGSC0003DMG400010428 Solanum tuberosum HOM05D005859 ORTHO05D007576 1.2e-49 200.3 244 47.5
Aa31LG11G4050 Aethionema arabicum HOM05D005859 ORTHO05D007576 2.7e-49 199.1 247 47.8
AT5G24840 Arabidopsis thaliana HOM05D005859 ORTHO05D007576 3.5e-49 198.7 249 46.6
Migut.A01131 Erythranthe guttata HOM05D005859 ORTHO05D007576 3.5e-49 198.7 250 47.2
Sopen02g017820 Solanum pennellii HOM05D005859 ORTHO05D007576 3.5e-49 198.7 238 47.9
Carub.0006s2269 Capsella rubella HOM05D005859 ORTHO05D007576 1.3e-48 196.8 239 47.3
Cc09_g05860 Coffea canephora HOM05D005859 ORTHO05D007576 1.3e-48 196.8 245 45.7
Sp2g22610 Schrenkiella parvula HOM05D005859 ORTHO05D007576 3.9e-48 195.3 248 44.4
BcaB04g19801 Brassica carinata HOM05D005859 ORTHO05D007576 1.5e-47 193.4 248 45.2
SalBow1G3786 Salvia bowleyana HOM05D005859 ORTHO05D007576 1.9e-47 193.0 250 46.4
MBI07_g41262_MAGBIO Magnolia biondii HOM05D005859 ORTHO05D007576 3.6e-46 188.7 249 43.8
CSS0033509 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 6.2e-46 188.0 201 50.7
SGA_v2.0_scaffold104G30176 Striga asiatica HOM05D005859 ORTHO05D007576 6.2e-46 188.0 244 45.1
BcaC04g23549 Brassica carinata HOM05D005859 ORTHO05D007576 1.1e-45 187.2 249 43.0
Aqoxy7G02813 Aquilegia oxysepala HOM05D005859 ORTHO05D007576 4.0e-45 185.3 248 44.8
PSO063G7086 Papaver somniferum HOM05D005859 ORTHO05D007576 5.2e-45 184.9 262 41.6
HPP92_010546 Vanilla planifolia HOM05D005859 ORTHO05D007576 2.2e-43 179.5 242 43.0
unitig_21.g20313 Utricularia gibba HOM05D005859 ORTHO05D007576 1.1e-42 177.2 235 43.4
Peaxi162Scf00149g00014 Petunia axillaris HOM05D005859 ORTHO05D007576 1.4e-42 176.8 247 42.9
HPP92_010527 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.2e-41 173.7 239 42.3
CSS0020153 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.7e-41 172.6 92 92.4
Zm00001eb208790 Zea mays HOM05D005859 ORTHO05D007576 2.7e-41 172.6 241 42.3
ATR0697G154 Amborella trichopoda HOM05D005859 ORTHO05D007576 1.1e-37 160.6 239 39.3
HanXRQChr07g0193381 Helianthus annuus HOM05D005859 ORTHO05D007576 1.5e-36 156.8 92 82.6
HanXRQChr09g0275211 Helianthus annuus HOM05D005859 ORTHO05D007576 4.4e-36 155.2 96 76.0
Lj2P347T15 Lonicera japonica HOM05D005859 ORTHO05D007576 1.3e-35 153.7 94 80.9
SEGI_16955 Sequoiadendron giganteum HOM05D005859 ORTHO05D007576 1.1e-34 150.6 271 35.4
BolC9t53628H Brassica oleracea HOM05D005859 ORTHO05D007576 1.4e-34 150.2 92 77.2
HPP92_010538 Vanilla planifolia HOM05D005859 ORTHO05D007576 5.4e-34 148.3 92 76.1
SMO358G0125 Selaginella moellendorffii HOM05D005859 ORTHO05D007576 7.8e-33 144.4 238 36.6
Pp3c24_9600 Physcomitrium patens HOM05D005859 ORTHO05D007576 1.3e-32 143.7 235 37.4
HPP92_010638 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.7e-32 143.3 91 74.7
Mapoly0026s0057 Marchantia polymorpha HOM05D005859 ORTHO05D007576 1.9e-31 139.8 267 34.5
AagrBONN_evm.TU.Sc2ySwM_344.1368 Anthoceros agrestis HOM05D005859 ORTHO05D007576 2.8e-30 136.0 253 34.4
CSS0016583 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.4e-29 133.7 73 86.3
HanXRQChr14g0440281 Helianthus annuus HOM05D005859 ORTHO05D007576 4.0e-29 132.1 191 40.3
Os06g0236900 Oryza sativa ssp. japonica HOM05D005859 ORTHO05D007576 1.2e-28 130.6 81 76.5
CBR_g63067 Chara braunii HOM05D005859 ORTHO05D007576 1.1e-26 124.0 266 32.0
GSVIVG01035552001 Vitis vinifera HOM05D005859 ORTHO05D007576 3.5e-25 119.0 223 38.6
PRCOL_00003713 Prasinoderma coloniale HOM05D005859 ORTHO05D007576 6.2e-22 108.2 90 57.8
Cre07.g314550 Chlamydomonas reinhardtii HOM05D005859 ORTHO05D007576 1.4e-21 107.1 90 54.4
MCO01G481 Micromonas commoda HOM05D005859 ORTHO05D007576 2.4e-21 106.3 237 30.8
HPP92_010585 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.6e-17 93.6 186 34.4
CDE05G2856 Ceratophyllum demersum HOM05D005859 ORTHO05D007576 2.7e-17 92.8 193 34.7
HPP92_010304 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.6e-14 83.6 170 33.5
Haze_26141 Corylus avellana HOM05D005859 ORTHO05D007576 3.1e-13 79.3 89 40.4
HPP92_010586 Vanilla planifolia HOM05D005859 ORTHO05D007576 5.8e-12 75.1 49 71.4
ATR1096G015 Amborella trichopoda HOM05D005859 ORTHO05D007576 7.6e-12 74.7 54 61.1
A09p06400 Brassica napus HOM05D005859 ORTHO05D007576 7.6e-12 74.7 48 70.8
Dinv07265 Davidia involucrata HOM05D005859 ORTHO05D007576 6.3e-06 55.1 33 81.8


User provided reference genes

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