Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 7.8e-141 503.8 261 100.0
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 3.8e-55 219.2 206 62.1
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 2.0e-43 180.3 201 51.2
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 7.5e-43 178.3 201 49.8
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 1.7e-42 177.2 161 60.2
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 4.9e-42 175.6 202 48.5
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 8.3e-42 174.9 193 52.3
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 8.3e-42 174.9 202 48.5
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 1.1e-41 174.5 192 53.1
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 1.1e-41 174.5 202 49.0
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.1e-41 174.5 195 51.8
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 5.4e-41 172.2 195 51.3
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 7.0e-41 171.8 193 49.7
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 7.0e-41 171.8 200 51.0
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 7.0e-41 171.8 199 51.3
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 1.2e-40 171.0 194 51.0
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 1.6e-40 170.6 193 49.2
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 1.6e-40 170.6 201 49.8
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 2.0e-40 170.2 194 51.0
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 5.9e-40 168.7 192 50.0
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 1.0e-39 167.9 202 46.0
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 2.3e-39 166.8 202 46.0
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 3.8e-39 166.0 195 48.7
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 8.6e-39 164.9 202 45.0
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 1.5e-38 164.1 191 52.4
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 1.5e-38 164.1 202 46.5
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 2.5e-38 163.3 195 46.2
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 3.3e-38 162.9 192 51.0
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 5.6e-38 162.2 191 51.8
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 7.3e-38 161.8 220 46.8
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 9.5e-38 161.4 191 51.8
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 1.6e-37 160.6 190 52.1
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 1.6e-37 160.6 194 47.9
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 2.8e-37 159.8 191 48.2
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 2.8e-37 159.8 195 50.3
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 4.7e-37 159.1 201 49.8
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 6.1e-37 158.7 188 50.0
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 1.0e-36 157.9 201 46.3
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 1.4e-36 157.5 202 46.0
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 4.0e-36 156.0 202 47.0
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 4.0e-36 156.0 197 50.3
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 6.8e-36 155.2 190 47.9
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 6.8e-36 155.2 188 48.9
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 8.9e-36 154.8 192 45.3
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 1.5e-35 154.1 201 48.3
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 2.6e-35 153.3 290 40.0
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 4.4e-35 152.5 198 45.5
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 4.4e-35 152.5 204 50.0
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 5.7e-35 152.1 204 45.1
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 9.8e-35 151.4 197 45.2
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 1.7e-34 150.6 195 48.7
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 2.2e-34 150.2 195 48.2
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 2.9e-34 149.8 195 48.7
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 2.9e-34 149.8 195 48.7
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 3.7e-34 149.4 194 45.4
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 1.1e-33 147.9 192 46.4
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 3.2e-33 146.4 191 44.0
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 9.2e-33 144.8 191 45.5
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 1.6e-32 144.1 201 45.3
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 3.5e-32 142.9 164 51.2
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 5.9e-32 142.1 191 45.0
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 7.8e-32 141.7 175 49.1
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 7.8e-32 141.7 205 43.4
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 7.8e-32 141.7 196 43.4
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 1.0e-31 141.4 171 50.3
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 3.0e-31 139.8 193 42.5
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 3.0e-31 139.8 204 43.1
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 5.0e-31 139.0 192 43.2
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 5.0e-31 139.0 190 44.2
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 6.6e-31 138.7 223 42.6
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 8.6e-31 138.3 197 44.2
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 8.6e-31 138.3 184 44.0
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 8.6e-31 138.3 185 44.3
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 8.6e-31 138.3 184 44.0
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 8.6e-31 138.3 188 41.5
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 8.6e-31 138.3 188 42.0
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 8.6e-31 138.3 193 42.0
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 1.1e-30 137.9 172 50.0
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 1.5e-30 137.5 193 42.5
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 1.9e-30 137.1 193 42.5
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 3.3e-30 136.3 191 42.4
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 5.6e-30 135.6 188 42.0
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 5.6e-30 135.6 184 44.0
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 1.2e-29 134.4 183 42.1
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 1.2e-29 134.4 181 47.5
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 2.8e-29 133.3 188 42.0
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 2.8e-29 133.3 188 42.0
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 1.8e-28 130.6 184 41.3
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 2.3e-28 130.2 152 49.3
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 4.0e-28 129.4 220 39.5
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 6.8e-28 128.6 202 39.6
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 2.0e-27 127.1 219 39.3
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 1.3e-26 124.4 108 62.0
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 6.4e-26 122.1 192 41.1
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 4.1e-25 119.4 172 44.2
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 1.2e-24 117.9 251 35.9
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 7.8e-24 115.2 103 61.2
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 1.3e-23 114.4 96 62.5
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 1.7e-23 114.0 162 43.8
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 6.6e-23 112.1 157 43.9
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 8.6e-23 111.7 173 39.3
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 2.5e-22 110.2 168 42.3
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 7.3e-22 108.6 146 45.2
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 3.7e-18 96.3 72 69.4
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 1.4e-17 94.4 86 62.8
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 2.1e-16 90.5 125 44.8
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 2.1e-16 90.5 168 36.3
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 2.7e-16 90.1 105 45.7
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 1.0e-15 88.2 199 34.7
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 2.5e-14 83.6 104 49.0
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 3.3e-14 83.2 253 30.4
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 4.3e-14 82.8 132 40.2
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 3.6e-13 79.7 49 73.5
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 8.1e-13 78.6 198 29.8
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 1.1e-12 78.2 102 49.0
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 1.1e-12 78.2 49 71.4
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 1.4e-12 77.8 191 30.9
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 2.0e-11 73.9 172 33.1
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 3.4e-11 73.2 102 40.2
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 3.4e-11 73.2 52 65.4
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 7.6e-11 72.0 56 71.4
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 6.0e-08 62.4 35 80.0
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 6.6e-07 58.9 120 32.5
BcaC05g24595 Brassica carinata HOM05D006082 ORTHO05D007616 6.6e-07 58.9 82 47.6


User provided reference genes

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