Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012449 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 5.8e-115 417.5 207 100.0
CSS0037169 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.5e-110 402.9 206 96.6
CSS0033607 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 2.3e-103 379.0 206 91.3
CSS0000878 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 8.7e-103 377.1 210 90.5
CSS0013170 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.9e-102 375.9 206 90.8
CSS0038207 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 3.5e-96 355.1 209 86.6
CSS0023953 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.7e-90 336.3 209 84.2
CSS0046839 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-40 170.6 196 48.5
CSS0040223 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.5e-38 161.4 202 47.5
CSS0041497 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-36 156.8 207 47.3
CSS0026441 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.8e-35 151.4 200 43.5
CSS0022166 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-34 149.4 205 46.8
CSS0046557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.7e-29 132.5 208 41.3
CSS0021557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.6e-26 121.3 194 42.8
Rhsim13G0163600 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.3e-25 118.2 200 39.0
vmacro23521 Vaccinium macrocarpon HOM05D000157 ORTHO05D016144 5.8e-22 108.6 239 36.4
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 1.1e-15 87.8 154 33.1
Dinv13014 Davidia involucrata HOM05D011494 ORTHO05D016144 6.8e-15 85.1 140 37.9
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.8e-15 85.1 163 41.1
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.8e-14 82.0 168 37.5
PSO591G0107 Papaver somniferum HOM05D000004 ORTHO05D000034 7.6e-14 81.6 147 32.0
Rhsim05G0059200 Rhododendron simsii HOM05D011494 ORTHO05D000034 9.9e-14 81.3 156 38.5
PSO063G4683 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-13 79.3 147 34.7
TWI63G0592 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.8e-13 79.3 140 36.4
PSO017G2690 Papaver somniferum HOM05D000004 ORTHO05D000224 4.9e-13 79.0 147 34.0
PSO210G5577 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-13 79.0 147 34.0
PSO210G6640 Papaver somniferum HOM05D000004 ORTHO05D000224 4.9e-13 79.0 147 34.0
PSO384G1551 Papaver somniferum HOM05D000004 ORTHO05D000224 4.9e-13 79.0 147 34.0
PSO063G2494 Papaver somniferum HOM05D000004 ORTHO05D000224 8.4e-13 78.2 147 34.0
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 8.4e-13 78.2 164 34.8
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.4e-13 78.2 189 33.3
PSO013G0187 Papaver somniferum HOM05D000004 ORTHO05D000224 1.1e-12 77.8 147 33.3
PSO384G3678 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-12 77.0 188 29.8
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 1.9e-12 77.0 164 34.1
FvH4_5g25163 Fragaria vesca HOM05D000004 ORTHO05D000224 2.4e-12 76.6 229 29.3
TWI09G0132 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.4e-12 76.6 138 34.8
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 5.4e-12 75.5 189 32.8
Rhsim05G0131300 Rhododendron simsii HOM05D000995 ORTHO05D000638 9.2e-12 74.7 177 36.7
Rhsim08G0139100 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.2e-11 74.3 166 34.3
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 6.0e-11 72.0 166 31.9
SHI48849 Sapria himalayana HOM05D000004 ORTHO05D000002 7.8e-11 71.6 163 30.1
PSO210G2852 Papaver somniferum HOM05D000004 ORTHO05D000224 1.7e-10 70.5 77 45.5
PSO210G6535 Papaver somniferum HOM05D000004 ORTHO05D000224 1.7e-10 70.5 77 44.2
PSO782G2227 Papaver somniferum HOM05D000004 ORTHO05D000034 1.7e-10 70.5 77 44.2
TWI31G0044 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.7e-10 70.5 139 34.5
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.9e-10 69.3 77 46.8
PSO339G4168 Papaver somniferum HOM05D000004 ORTHO05D000224 3.9e-10 69.3 70 45.7
PSO384G2626 Papaver somniferum HOM05D000004 ORTHO05D000034 5.1e-10 68.9 77 45.5
PSO210G4059 Papaver somniferum HOM05D000004 ORTHO05D000224 6.6e-10 68.6 77 42.9
RcHm_v2.0_Chr5g0019091 Rosa chinensis HOM05D000004 ORTHO05D000034 6.6e-10 68.6 140 32.9
FvH4_6g27413 Fragaria vesca HOM05D000004 ORTHO05D000224 8.7e-10 68.2 138 32.6
PSO384G2907 Papaver somniferum HOM05D000004 ORTHO05D000224 1.1e-09 67.8 97 39.2
TWI63G1229 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.9e-09 67.0 138 30.4
TWI81G0457 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.9e-09 67.0 138 31.9
TWI32G0978 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.5e-09 66.6 139 33.1
PSO013G0379 Papaver somniferum HOM05D000004 ORTHO05D000224 3.3e-09 66.2 77 41.6
CSS0043796 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 7.3e-09 65.1 70 50.0
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.3e-09 65.1 85 44.7
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.6e-09 64.7 154 32.5
CSS0023479 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 9.6e-09 64.7 65 47.7
CSS0025010 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 9.6e-09 64.7 65 47.7
CSS0025827 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 9.6e-09 64.7 69 46.4
CSS0033949 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-08 64.3 210 30.0
Hma1.2p1_2793F.1_g328630 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.2e-08 64.3 174 32.2
TWI63G1291 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.2e-08 64.3 92 40.2
CSS0026637 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.6e-08 63.9 69 46.4
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 1.6e-08 63.9 76 46.1
TWI79G1342 Tripterygium wilfordii HOM05D000004 ORTHO05D000034 1.6e-08 63.9 254 28.0
CSS0006373 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-08 63.5 190 28.4
CSS0014469 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.1e-08 63.5 65 46.2
CSS0014554 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.1e-08 63.5 69 46.4
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 2.1e-08 63.5 197 32.5
CSS0044817 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-08 63.5 185 30.3
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 2.1e-08 63.5 151 33.1
vmacro12874 Vaccinium macrocarpon HOM05D002341 ORTHO05D015231 2.1e-08 63.5 159 30.2
CSS0009469 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D000034 2.8e-08 63.2 54 53.7
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.8e-08 63.2 212 29.2
PSO170G4224 Papaver somniferum HOM05D000004 ORTHO05D000224 2.8e-08 63.2 140 30.0
PSO478G0812 Papaver somniferum HOM05D000004 ORTHO05D000224 3.6e-08 62.8 129 28.7
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 3.6e-08 62.8 159 30.2
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-08 62.4 194 29.9
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-08 62.4 212 30.7
FvH4_3g35241 Fragaria vesca HOM05D000004 ORTHO05D000002 4.7e-08 62.4 126 31.0
CSS0025076 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 6.2e-08 62.0 179 27.9
CSS0033375 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 6.2e-08 62.0 65 46.2
PSO782G4596 Papaver somniferum HOM05D000004 ORTHO05D000224 6.2e-08 62.0 71 40.8
PSO832G2581 Papaver somniferum HOM05D000004 ORTHO05D000224 6.2e-08 62.0 165 29.1
SHI46790 Sapria himalayana HOM05D000004 ORTHO05D000224 6.2e-08 62.0 75 36.0
Actinidia04037 Actinidia chinensis HOM05D000004 ORTHO05D000034 8.1e-08 61.6 139 30.9
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.1e-08 61.6 212 29.2
CSS0011436 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 8.1e-08 61.6 70 47.1
CSS0042777 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 8.1e-08 61.6 65 44.6
CSS0021854 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-07 61.2 155 30.3
Rhsim06G0100400 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.1e-07 61.2 80 40.0
Rhsim11G0010200 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.1e-07 61.2 188 28.2
CSS0027245 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.4e-07 60.8 65 44.6
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-07 60.5 185 29.2
Ca_04624_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.8e-07 60.5 166 29.5
FvH4_3g28463 Fragaria vesca HOM05D011494 ORTHO05D000034 1.8e-07 60.5 97 38.1
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 2.4e-07 60.1 163 27.6
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 2.4e-07 60.1 163 27.6
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-07 60.1 188 28.7
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-07 60.1 212 28.3
Ca_28406_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.4e-07 60.1 150 28.7
Rhsim06G0088500 Rhododendron simsii HOM05D020422 ORTHO05D000224 2.4e-07 60.1 191 28.8
TWI32G0319 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.4e-07 60.1 159 27.0
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-07 59.7 191 28.8
CSS0030164 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.1e-07 59.7 69 42.0
CSS0048163 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-07 59.7 171 29.2
Rhsim02G0006400 Rhododendron simsii HOM05D020422 ORTHO05D000224 3.1e-07 59.7 188 30.3
Ca_24325_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.0e-07 59.3 212 27.4
FvH4_4g06575 Fragaria vesca HOM05D000004 ORTHO05D000002 4.0e-07 59.3 104 33.7
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.0e-07 59.3 195 29.7
PSO170G5394 Papaver somniferum HOM05D000004 ORTHO05D000002 4.0e-07 59.3 92 35.9
Rhsim07G0155000 Rhododendron simsii HOM05D011494 ORTHO05D016144 5.3e-07 58.9 58 55.2
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.3e-07 58.9 195 29.2
Actinidia34655 Actinidia chinensis HOM05D000004 ORTHO05D000034 6.9e-07 58.5 178 29.8
CSS0003101 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.9e-07 58.5 191 28.3
CSS0019890 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.9e-07 58.5 191 28.3
CSS0047776 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.9e-07 58.5 191 28.3
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 6.9e-07 58.5 169 31.4
Ca_23948_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 9.0e-07 58.2 83 38.6
Hma1.2p1_0209F.1_g088450 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 9.0e-07 58.2 153 30.7
PSO700G0012 Papaver somniferum HOM05D000004 ORTHO05D000002 9.0e-07 58.2 176 27.8
Rhsim02G0151000 Rhododendron simsii HOM05D011308 ORTHO05D000224 9.0e-07 58.2 82 39.0
Rhsim03G0014100 Rhododendron simsii HOM05D011494 ORTHO05D000034 9.0e-07 58.2 115 37.4
CSS0017223 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.2e-06 57.8 58 50.0
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-06 57.4 215 28.4
CiPaw.05G010700 Carya illinoinensis HOM05D000004 ORTHO05D000034 1.5e-06 57.4 164 29.9
Rhsim09G0012700 Rhododendron simsii HOM05D011494 ORTHO05D016144 1.5e-06 57.4 160 31.2
Thecc.09G221700 Theobroma cacao HOM05D010356 ORTHO05D000034 1.5e-06 57.4 174 27.6
MD02G1270300 Malus domestica HOM05D000004 ORTHO05D000224 2.0e-06 57.0 141 32.6
PSO339G1570 Papaver somniferum HOM05D000004 ORTHO05D000224 2.0e-06 57.0 62 51.6
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 2.6e-06 56.6 70 41.4
PSO461G0080 Papaver somniferum HOM05D011494 ORTHO05D003797 2.6e-06 56.6 139 29.5
RhsimUnG0157800 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.6e-06 56.6 85 37.6
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 3.4e-06 56.2 178 30.3
FvH4_3g34551 Fragaria vesca HOM05D008371 ORTHO05D000224 3.4e-06 56.2 150 28.7
FvH4_4g16178 Fragaria vesca HOM05D000004 ORTHO05D000224 3.4e-06 56.2 148 33.1
Oeu036689.1 Olea europaea HOM05D009054 ORTHO05D000034 3.4e-06 56.2 164 29.9
Oeu061602.1 Olea europaea HOM05D009054 ORTHO05D000034 3.4e-06 56.2 154 31.2
TWI56G0795 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.4e-06 56.2 136 28.7
CSS0007342 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.4e-06 55.8 65 41.5
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.4e-06 55.8 191 28.3
FvH4_4g16282 Fragaria vesca HOM05D011494 ORTHO05D000034 4.4e-06 55.8 140 29.3
PSO210G0132 Papaver somniferum HOM05D000004 ORTHO05D000224 4.4e-06 55.8 138 26.8
Rhsim10G0110100 Rhododendron simsii HOM05D011308 ORTHO05D000034 4.4e-06 55.8 80 38.8
vmacro21906 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 4.4e-06 55.8 80 36.2
CSS0008327 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.8e-06 55.5 191 28.3
Hma1.2p1_0866F.1_g230150 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 5.8e-06 55.5 56 48.2
QL08p035596 Quercus lobata HOM05D000004 ORTHO05D000002 5.8e-06 55.5 175 27.4
Rhsim10G0127900 Rhododendron simsii HOM05D011308 ORTHO05D000034 5.8e-06 55.5 82 39.0
TWI63G1028 Tripterygium wilfordii HOM05D011603 ORTHO05D000034 5.8e-06 55.5 228 23.2
CSS0015860 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.6e-06 55.1 175 27.4
CSS0001225 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 9.9e-06 54.7 83 38.6
Oeu060138.1 Olea europaea HOM05D000004 ORTHO05D000224 9.9e-06 54.7 96 34.4
Oeu061981.1 Olea europaea HOM05D009054 ORTHO05D000034 9.9e-06 54.7 162 27.8
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 9.9e-06 54.7 155 29.0
Sopen01g019680 Solanum pennellii HOM05D000004 ORTHO05D000016 9.9e-06 54.7 167 29.3


User provided reference genes

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