Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012418 Camellia sinensis var. sinensis HOM05D001035 ORTHO05D023228 3.9e-44 181.0 87 100.0
CSS0040615 Camellia sinensis var. sinensis HOM05D001035 ORTHO05D001045 7.3e-43 176.8 86 98.8
Lj3A34G36 Lonicera japonica HOM05D001035 ORTHO05D001045 4.6e-29 131.0 86 74.4
Dinv41743 Davidia involucrata HOM05D001035 ORTHO05D001045 6.6e-28 127.1 83 71.1
FAN08G1353 Fragaria x ananassa HOM05D001035 ORTHO05D001045 2.1e-26 122.1 86 68.6
Nn3g18383 Nelumbo nucifera HOM05D001035 ORTHO05D001045 2.1e-26 122.1 83 69.9
Prupe.1G552900 Prunus persica HOM05D001035 ORTHO05D001045 4.7e-26 120.9 86 69.8
TAR381G0676 Trochodendron aralioides HOM05D001035 ORTHO05D001045 1.1e-25 119.8 83 68.7
FAN13G2816 Fragaria x ananassa HOM05D001035 ORTHO05D001045 1.4e-25 119.4 86 68.6
Nitab4.5_0002013g0020 Nicotiana tabacum HOM05D001035 ORTHO05D001045 1.4e-25 119.4 87 65.5
Nitab4.5_0003211g0030 Nicotiana tabacum HOM05D001035 ORTHO05D001045 1.4e-25 119.4 87 65.5
RcHm_v2.0_Chr7g0228111 Rosa chinensis HOM05D001035 ORTHO05D001045 1.4e-25 119.4 86 68.6
Atru.chr13.2382 Acer truncatum HOM05D001035 ORTHO05D001045 2.3e-25 118.6 86 66.3
FvH4_5g32060 Fragaria vesca HOM05D001035 ORTHO05D001045 3.1e-25 118.2 86 67.4
FAN18G0239 Fragaria x ananassa HOM05D001035 ORTHO05D001045 3.1e-25 118.2 86 67.4
Oeu013894.4 Olea europaea HOM05D001035 ORTHO05D001045 5.2e-25 117.5 87 65.5
Peaxi162Scf00391g00737 Petunia axillaris HOM05D001035 ORTHO05D001045 5.2e-25 117.5 81 66.7
MD15G1408200 Malus domestica HOM05D001035 ORTHO05D001045 6.8e-25 117.1 86 65.1
Ciclev10000204m.g Citrus clementina HOM05D001035 ORTHO05D001045 8.9e-25 116.7 86 65.1
Haze_21290 Corylus avellana HOM05D001035 ORTHO05D001045 8.9e-25 116.7 86 66.3
Thecc.08G188300 Theobroma cacao HOM05D001035 ORTHO05D001045 8.9e-25 116.7 86 64.0
CiPaw.08G002100 Carya illinoinensis HOM05D001035 ORTHO05D001045 2.0e-24 115.5 86 67.4
Duzib116G0807 Durio zibethinus HOM05D001035 ORTHO05D001045 2.0e-24 115.5 84 65.5
Sabra13G0093300 Salix brachista HOM05D001035 ORTHO05D001045 2.0e-24 115.5 86 66.3
Potri.019G080300 Populus trichocarpa HOM05D001035 ORTHO05D001045 3.4e-24 114.8 86 64.0
GSVIVG01036236001 Vitis vinifera HOM05D001035 ORTHO05D001045 3.4e-24 114.8 86 64.0
MD08G1219600 Malus domestica HOM05D001035 ORTHO05D001045 4.4e-24 114.4 86 65.1
Gohir.A02G087300 Gossypium hirsutum HOM05D001035 ORTHO05D001045 2.2e-23 112.1 80 66.2
Solyc11g022380.3 Solanum lycopersicum HOM05D001035 ORTHO05D001045 2.2e-23 112.1 87 60.9
Sopen11g011250 Solanum pennellii HOM05D001035 ORTHO05D001045 2.2e-23 112.1 87 60.9
SalBow7G3463 Salvia bowleyana HOM05D001035 ORTHO05D001045 2.9e-23 111.7 88 60.2
Cc10_g10150 Coffea canephora HOM05D001035 ORTHO05D001045 3.7e-23 111.3 87 60.9
Gorai.005G115800 Gossypium raimondii HOM05D001035 ORTHO05D001045 1.1e-22 109.8 80 66.2
Cpa.g.sc66.12 Carica papaya HOM05D001035 ORTHO05D001045 2.4e-22 108.6 84 60.7
Gohir.D02G102100 Gossypium hirsutum HOM05D001035 ORTHO05D001045 3.2e-22 108.2 80 65.0
Potri.013G107950 Populus trichocarpa HOM05D001035 ORTHO05D001045 4.1e-22 107.8 86 62.8
DCAR_011522 Daucus carota HOM05D001035 ORTHO05D001045 5.4e-22 107.5 86 58.1
vmacro00749 Vaccinium macrocarpon HOM05D001035 ORTHO05D001045 5.4e-22 107.5 64 79.7
Phvul.011G001200 Phaseolus vulgaris HOM05D001035 ORTHO05D001045 7.1e-22 107.1 86 58.1
MBI03_g13494_MAGBIO Magnolia biondii HOM05D001035 ORTHO05D001045 9.2e-22 106.7 83 66.3
Sed0015270 Sechium edule HOM05D001035 ORTHO05D001045 9.2e-22 106.7 86 59.3
CsaV3_2G033000 Cucumis sativus L. HOM05D001035 ORTHO05D001045 1.2e-21 106.3 86 58.1
Migut.C01305 Erythranthe guttata HOM05D001035 ORTHO05D001045 1.2e-21 106.3 87 58.6
MELO3C008069.2 Cucumis melo HOM05D001035 ORTHO05D001045 3.5e-21 104.8 86 57.0
Ca_19705_v3 Cicer arietinum L. HOM05D001035 ORTHO05D001045 6.0e-21 104.0 86 57.0
Psat7g225680 Pisum sativum HOM05D001035 ORTHO05D001045 6.0e-21 104.0 86 58.1
Lalb_Chr01g0000111 Lupinus albus HOM05D001035 ORTHO05D001045 7.8e-21 103.6 85 55.3
VMungo1127G0841 Vigna mungo HOM05D001035 ORTHO05D001045 7.8e-21 103.6 86 54.7
PGSC0003DMG400009269 Solanum tuberosum HOM05D001035 ORTHO05D023228 1.0e-20 103.2 82 59.8
PGR042G2161 Punica granatum HOM05D001035 ORTHO05D001045 2.3e-20 102.1 83 55.4
Medtr4g032925 Medicago truncatula HOM05D001035 ORTHO05D001045 3.0e-20 101.7 86 55.8
Medtr4g032935 Medicago truncatula HOM05D001035 ORTHO05D001045 3.0e-20 101.7 86 55.8
Actinidia18883 Actinidia chinensis HOM05D001035 ORTHO05D001045 3.9e-20 101.3 64 78.1
Glyma.08G238800 Glycine max HOM05D001035 ORTHO05D001045 3.9e-20 101.3 86 55.8
Rhsim11G0054800 Rhododendron simsii HOM05D001035 ORTHO05D001045 3.9e-20 101.3 64 79.7
ClCG11G008630 Citrullus lanatus HOM05D001035 ORTHO05D023228 5.1e-20 100.9 86 58.1
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 5.1e-20 100.9 84 59.5
Aqoxy5G03463 Aquilegia oxysepala HOM05D001035 ORTHO05D001045 8.6e-20 100.1 83 63.9
Lj3g0009046 Lotus japonicus HOM05D001035 ORTHO05D001045 8.6e-20 100.1 85 52.9
SGA_v2.0_scaffold118G32529 Striga asiatica HOM05D001035 ORTHO05D001045 8.6e-20 100.1 87 55.2
Actinidia35139 Actinidia chinensis HOM05D001035 ORTHO05D001045 1.1e-19 99.8 64 76.6
Glyma.12G001200 Glycine max HOM05D001035 ORTHO05D001045 1.1e-19 99.8 86 53.5
Sabra19G0091500 Salix brachista HOM05D001035 ORTHO05D001045 1.1e-19 99.8 86 60.5
SGA_v2.0_scaffold118G32518 Striga asiatica HOM05D001035 ORTHO05D001045 1.1e-19 99.8 87 55.2
arahy.Tifrunner.gnm1.ann1.V13CJX Arachis hypogaea HOM05D001035 ORTHO05D001045 3.3e-19 98.2 85 52.9
arahy.Tifrunner.gnm1.ann1.LX8XJC Arachis hypogaea HOM05D001035 ORTHO05D001045 4.3e-19 97.8 85 51.8
EL10Ac1g00120 Beta vulgaris HOM05D001035 ORTHO05D001045 4.3e-19 97.8 86 57.0
Eucgr.F03001 Eucalyptus grandis HOM05D001035 ORTHO05D001045 9.5e-19 96.7 86 54.7
Hund27102 Selenicereus undatus HOM05D001035 ORTHO05D001045 9.5e-19 96.7 85 50.6
TPR.G34169 Trifolium pratense HOM05D001035 ORTHO05D001045 1.2e-18 96.3 86 52.3
AUR62022644 Chenopodium quinoa HOM05D001035 ORTHO05D001045 3.6e-18 94.7 86 54.7
TWI14G1389 Tripterygium wilfordii HOM05D001035 ORTHO05D001045 3.6e-18 94.7 82 53.7
AUR62004617 Chenopodium quinoa HOM05D001035 ORTHO05D001045 1.1e-17 93.2 86 53.5
CANSAT01G0217 Cannabis sativa HOM05D001035 ORTHO05D001045 1.8e-17 92.4 86 51.2
Lsat_1_v5_gn_1_12260 Lactuca sativa HOM05D001035 ORTHO05D001045 1.8e-17 92.4 79 57.0
Actinidia13531 Actinidia chinensis HOM05D000088 ORTHO05D023228 2.4e-17 92.0 62 71.0
HanXRQChr02g0044241 Helianthus annuus HOM05D001035 ORTHO05D001045 2.4e-17 92.0 86 53.5
ATR0693G444 Amborella trichopoda HOM05D001035 ORTHO05D001045 5.2e-17 90.9 82 54.9
Os08g0109100 Oryza sativa ssp. japonica HOM05D001035 ORTHO05D001045 5.2e-17 90.9 83 53.0
Ah.05g178430 Amaranthus hybridus HOM05D001035 ORTHO05D001045 6.8e-17 90.5 80 57.5
PSO170G4043 Papaver somniferum HOM05D001035 ORTHO05D001045 5.8e-16 87.4 83 53.0
HPP92_001194 Vanilla planifolia HOM05D001035 ORTHO05D001045 7.6e-16 87.0 80 52.5
PSO017G4800 Papaver somniferum HOM05D001035 ORTHO05D001045 9.9e-16 86.7 83 53.0
BcaB03g11914 Brassica carinata HOM05D001035 ORTHO05D001045 1.3e-15 86.3 85 52.9
A07p14280 Brassica napus HOM05D001035 ORTHO05D001045 1.3e-15 86.3 85 49.4
BraA07t29185Z Brassica rapa HOM05D001035 ORTHO05D001045 1.3e-15 86.3 85 49.4
BcaC06g34979 Brassica carinata HOM05D001035 ORTHO05D001045 2.2e-15 85.5 85 49.4
C07p21000 Brassica napus HOM05D001035 ORTHO05D001045 2.2e-15 85.5 85 49.4
BolC7t42632H Brassica oleracea HOM05D001035 ORTHO05D001045 2.2e-15 85.5 85 49.4
SEGI_16379 Sequoiadendron giganteum HOM05D001035 ORTHO05D001045 4.9e-15 84.3 85 54.1
AL1G36150 Arabidopsis lyrata HOM05D001035 ORTHO05D001045 6.4e-15 84.0 85 48.2
Thhalv10006740m.g Eutrema salsugineum HOM05D001035 ORTHO05D001045 6.4e-15 84.0 85 50.6
A08p28460 Brassica napus HOM05D001035 ORTHO05D001045 1.1e-14 83.2 85 51.8
BraA08t34775Z Brassica rapa HOM05D001035 ORTHO05D001045 1.1e-14 83.2 85 51.8
BcaC07g39169 Brassica carinata HOM05D001035 ORTHO05D001045 1.4e-14 82.8 85 51.8
C08p21620 Brassica napus HOM05D001035 ORTHO05D001045 1.4e-14 82.8 85 51.8
BolC8t49800H Brassica oleracea HOM05D001035 ORTHO05D001045 1.4e-14 82.8 85 51.8
AT1G22620 Arabidopsis thaliana HOM05D001035 ORTHO05D001045 1.9e-14 82.4 85 48.2
Sp1g20120 Schrenkiella parvula HOM05D001035 ORTHO05D001045 5.4e-14 80.9 85 49.4
Aa31LG7G6510 Aethionema arabicum HOM05D001035 ORTHO05D001045 7.1e-14 80.5 85 47.1
Carub.0001s2213 Capsella rubella HOM05D001035 ORTHO05D001045 1.6e-13 79.3 82 48.8
BcaB07g32272 Brassica carinata HOM05D001035 ORTHO05D001045 2.7e-13 78.6 85 44.7
DCAR_001460 Daucus carota HOM05D001035 ORTHO05D001045 1.0e-12 76.6 65 56.9
unitig_32.g11184 Utricularia gibba HOM05D001035 ORTHO05D007098 1.0e-12 76.6 64 56.2
BolC5t30870H Brassica oleracea HOM05D001035 ORTHO05D001045 5.1e-12 74.3 87 41.4
CDE02G2546 Ceratophyllum demersum HOM05D001035 ORTHO05D001045 5.1e-12 74.3 75 49.3
Manes.02G196600 Manihot esculenta HOM05D001035 ORTHO05D001045 8.7e-12 73.6 65 58.5
C05p21760 Brassica napus HOM05D001035 ORTHO05D001045 1.1e-11 73.2 87 40.2
BcaC05g26190 Brassica carinata HOM05D001035 ORTHO05D001045 1.1e-09 66.6 67 44.8
THA.LOC104810575 Tarenaya hassleriana HOM05D001035 ORTHO05D001045 1.1e-09 66.6 78 41.0


User provided reference genes

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