Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 2.8e-152 542.0 285 100.0
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.4e-119 433.3 287 77.4
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 5.9e-118 427.9 286 77.3
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.1e-116 423.7 286 75.9
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 5.5e-116 421.4 286 76.9
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 3.6e-115 418.7 285 73.3
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 3.6e-115 418.7 285 73.3
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 1.1e-111 407.1 286 73.8
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 3.5e-110 402.1 287 73.2
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 1.0e-109 400.6 287 71.8
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 2.3e-109 399.4 282 70.6
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 5.0e-109 398.3 285 70.5
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 6.6e-109 397.9 291 70.4
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 5.6e-108 394.8 285 70.5
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 2.8e-107 392.5 286 69.9
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 4.7e-107 391.7 285 69.1
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 8.0e-107 391.0 285 69.1
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 8.0e-107 391.0 279 70.3
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 6.8e-106 387.9 285 67.0
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 8.9e-106 387.5 285 68.8
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 5.8e-105 384.8 285 67.7
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 1.3e-104 383.6 269 71.0
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.7e-104 383.3 285 68.4
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 2.9e-104 382.5 285 68.1
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 4.9e-104 381.7 286 67.1
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 1.9e-103 379.8 266 74.1
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 1.9e-103 379.8 285 67.7
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 4.1e-103 378.6 285 66.3
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 4.1e-103 378.6 274 70.4
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 5.4e-103 378.3 286 66.8
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 5.4e-103 378.3 285 66.7
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 5.4e-103 378.3 293 68.3
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 5.4e-103 378.3 283 68.2
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 7.0e-103 377.9 288 67.7
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.6e-102 376.7 285 66.7
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 1.0e-101 374.0 287 67.2
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.3e-101 373.6 293 68.3
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 1.3e-101 373.6 289 66.1
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.7e-101 373.2 285 66.3
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 3.0e-101 372.5 282 67.0
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 3.9e-101 372.1 293 66.2
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 5.0e-101 371.7 284 66.2
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 5.0e-101 371.7 296 65.5
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 6.6e-101 371.3 285 64.2
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 2.5e-100 369.4 318 61.3
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 3.3e-100 369.0 285 67.0
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 5.6e-100 368.2 286 66.1
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 5.6e-100 368.2 286 66.8
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 5.6e-100 368.2 287 65.9
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 1.6e-99 366.7 296 65.2
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 1.6e-99 366.7 286 66.1
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 2.1e-99 366.3 288 64.6
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 2.1e-99 366.3 291 65.6
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 2.1e-99 366.3 285 66.0
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 2.8e-99 365.9 284 64.1
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 3.6e-99 365.5 285 66.0
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 3.6e-99 365.5 286 66.4
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 3.6e-99 365.5 284 66.9
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 1.1e-98 364.0 269 69.1
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 1.4e-98 363.6 287 65.9
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 1.4e-98 363.6 287 65.5
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 2.3e-98 362.8 285 70.5
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 3.1e-98 362.5 285 64.2
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 4.0e-98 362.1 268 68.3
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 5.2e-98 361.7 284 63.7
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 8.9e-98 360.9 270 67.4
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 1.5e-97 360.1 361 57.1
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 1.5e-97 360.1 283 65.0
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 2.0e-97 359.8 301 63.5
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 5.8e-97 358.2 290 63.4
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 5.8e-97 358.2 285 63.9
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 7.5e-97 357.8 285 66.0
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 1.7e-96 356.7 268 67.5
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 4.9e-96 355.1 285 68.1
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 8.3e-96 354.4 284 64.1
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 8.3e-96 354.4 288 69.4
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 1.9e-95 353.2 285 68.1
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 3.2e-95 352.4 285 64.2
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 4.1e-95 352.1 270 68.5
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 1.2e-94 350.5 284 64.8
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 1.2e-94 350.5 284 64.1
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.2e-94 350.5 288 64.6
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 2.7e-94 349.4 285 64.2
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 5.0e-93 345.1 285 62.1
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 6.6e-93 344.7 284 62.7
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 8.6e-93 344.4 270 67.8
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.1e-92 344.0 249 68.7
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 1.6e-91 340.1 282 61.3
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 4.7e-91 338.6 286 61.9
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 6.2e-91 338.2 271 63.8
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 8.1e-91 337.8 286 61.9
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 3.1e-90 335.9 286 61.9
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 3.1e-90 335.9 286 61.9
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 6.8e-90 334.7 283 62.2
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 1.7e-88 330.1 439 44.9
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 2.1e-86 323.2 264 64.8
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.7e-85 320.1 265 61.5
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 1.9e-84 316.6 287 61.0
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 6.2e-83 311.6 286 59.1
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 9.9e-81 304.3 246 65.4
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 4.9e-80 302.0 265 61.1
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 1.1e-79 300.8 288 56.6
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 2.7e-78 296.2 271 55.0
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 2.3e-77 293.1 287 57.1
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 3.0e-77 292.7 271 55.0
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 3.3e-76 289.3 199 70.4
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 2.1e-75 286.6 279 57.0
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.2e-73 280.8 284 54.6
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 3.4e-73 279.3 251 57.8
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 9.9e-73 277.7 285 55.8
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.7e-72 276.9 284 53.9
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 2.4e-71 273.1 215 62.8
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 2.3e-69 266.5 277 49.5
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 6.6e-69 265.0 265 55.5
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.8e-67 259.6 194 66.5
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 4.6e-62 242.3 265 48.3
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 9.6e-60 234.6 166 67.5
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 1.8e-58 230.3 168 68.5
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 3.4e-57 226.1 265 46.0
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 7.6e-57 224.9 168 69.0
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 1.1e-55 221.1 266 45.9
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 9.3e-55 218.0 257 50.2
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 9.3e-55 218.0 269 45.0
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 1.0e-53 214.5 265 46.0
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 3.8e-48 196.1 270 43.3
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 9.3e-47 191.4 167 62.9
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 1.8e-45 187.2 269 44.2
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 6.3e-43 178.7 217 48.8
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 5.5e-39 165.6 117 68.4
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.2e-33 147.9 150 54.0
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 1.9e-31 140.6 121 57.0
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 1.4e-13 81.3 117 39.3
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 1.2e-12 78.2 243 32.5
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.8e-10 70.9 72 51.4
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 2.7e-09 67.0 181 33.1


User provided reference genes

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