Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012387 Camellia sinensis var. sinensis HOM05D003319 ORTHO05D003739 5.2e-146 521.2 287 100.0
vmacro04648 Vaccinium macrocarpon HOM05D003319 ORTHO05D003739 7.2e-39 165.2 268 47.4
Rhsim07G0212100 Rhododendron simsii HOM05D003319 ORTHO05D003739 1.0e-37 161.4 288 45.1
Actinidia19627 Actinidia chinensis HOM05D003319 ORTHO05D003739 8.8e-37 158.3 284 42.6
Cc10_g15920 Coffea canephora HOM05D003319 ORTHO05D003739 9.4e-31 138.3 274 39.1
Dinv42609 Davidia involucrata HOM05D003319 ORTHO05D003739 2.1e-30 137.1 309 38.8
MSTRG.11807 Avicennia marina HOM05D003319 ORTHO05D003739 8.6e-24 115.2 270 40.0
Lj4A737G58 Lonicera japonica HOM05D003319 ORTHO05D003739 1.5e-20 104.4 122 58.2
Hma1.2p1_0125F.1_g058840 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 7.5e-20 102.1 295 36.6
Peaxi162Scf00160g01038 Petunia axillaris HOM05D003319 ORTHO05D003739 7.8e-17 92.0 236 39.0
Nn1g05581 Nelumbo nucifera HOM05D003319 ORTHO05D003739 1.3e-16 91.3 290 33.4
CANSAT35G1730 Cannabis sativa HOM05D003319 ORTHO05D003739 2.3e-16 90.5 290 33.1
TAR628G1108 Trochodendron aralioides HOM05D003319 ORTHO05D003739 8.6e-16 88.6 300 34.0
TAR376G1177 Trochodendron aralioides HOM05D003319 ORTHO05D003739 5.6e-15 85.9 282 35.5
DCAR_019315 Daucus carota HOM05D003319 ORTHO05D003739 1.2e-14 84.7 213 38.0
Hma1.2p1_0010F.1_g006630 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 1.2e-14 84.7 102 54.9
Nitab4.5_0001607g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 1.6e-14 84.3 220 38.2
SalBow4G2315 Salvia bowleyana HOM05D003319 ORTHO05D003739 4.7e-14 82.8 224 35.3
Aqoxy5G01378 Aquilegia oxysepala HOM05D003319 ORTHO05D003739 1.0e-13 81.6 104 52.9
CDE05G3064 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 1.4e-13 81.3 103 54.4
Ciclev10000622m.g Citrus clementina HOM05D003319 ORTHO05D003739 1.4e-13 81.3 281 31.7
MD15G1385800 Malus domestica HOM05D003319 ORTHO05D003739 1.4e-13 81.3 257 35.0
Hund04947 Selenicereus undatus HOM05D003319 ORTHO05D003739 1.4e-13 81.3 95 60.0
Eucgr.F02154 Eucalyptus grandis HOM05D003319 ORTHO05D003739 2.3e-13 80.5 224 38.4
GSVIVG01009184001 Vitis vinifera HOM05D003319 ORTHO05D003739 6.8e-13 79.0 157 43.3
Solyc12g087970.2 Solanum lycopersicum HOM05D003319 ORTHO05D003739 1.2e-12 78.2 216 38.4
Oeu040388.1 Olea europaea HOM05D003319 ORTHO05D003739 1.5e-12 77.8 168 36.9
Peaxi162Scf00454g00323 Petunia axillaris HOM05D003319 ORTHO05D003739 2.0e-12 77.4 288 31.2
Atru.chr13.1006 Acer truncatum HOM05D003319 ORTHO05D003739 5.8e-12 75.9 198 37.9
Sopen12g030000 Solanum pennellii HOM05D003319 ORTHO05D003739 5.8e-12 75.9 205 38.5
Prupe.1G532700 Prunus persica HOM05D003319 ORTHO05D003739 7.5e-12 75.5 250 32.4
Nitab4.5_0000131g0210 Nicotiana tabacum HOM05D003319 ORTHO05D003739 9.8e-12 75.1 242 35.5
SGA_v2.0_scaffold193G40665 Striga asiatica HOM05D003319 ORTHO05D003739 1.3e-11 74.7 93 50.5
EL10Ac1g00993 Beta vulgaris HOM05D003319 ORTHO05D003739 1.7e-11 74.3 95 52.6
PGSC0003DMG400002048 Solanum tuberosum HOM05D003319 ORTHO05D003739 2.2e-11 73.9 204 38.2
MD08G1198900 Malus domestica HOM05D003319 ORTHO05D003739 4.9e-11 72.8 73 67.1
Sc26g0002970 Simmondsia chinensis HOM05D003319 ORTHO05D003739 4.9e-11 72.8 97 53.6
AUR62019092 Chenopodium quinoa HOM05D003319 ORTHO05D003739 8.3e-11 72.0 103 50.5
Potri.002G106500 Populus trichocarpa HOM05D003319 ORTHO05D003739 1.1e-10 71.6 302 29.5
Migut.A00432 Erythranthe guttata HOM05D003319 ORTHO05D003739 1.4e-10 71.2 104 47.1
Manes.02G144600 Manihot esculenta HOM05D003319 ORTHO05D003739 1.4e-10 71.2 249 36.9
Prupe.1G532600 Prunus persica HOM05D003319 ORTHO05D003739 1.9e-10 70.9 175 38.3
Manes.18G058300 Manihot esculenta HOM05D003319 ORTHO05D003739 5.4e-10 69.3 216 37.5
Sabra02G0083800 Salix brachista HOM05D003319 ORTHO05D003739 5.4e-10 69.3 119 44.5
QL09p017848 Quercus lobata HOM05D003319 ORTHO05D003739 9.2e-10 68.6 290 31.7
Lj4A717G27 Lonicera japonica HOM05D003319 ORTHO05D003739 1.6e-09 67.8 107 45.8
Hund17284 Selenicereus undatus HOM05D003319 ORTHO05D003739 2.7e-09 67.0 192 37.0
Nitab4.5_0000354g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 6.0e-09 65.9 227 34.8
Duzib041G0541 Durio zibethinus HOM05D003319 ORTHO05D003739 1.7e-08 64.3 257 30.4
AUR62014349 Chenopodium quinoa HOM05D003319 ORTHO05D003739 3.0e-08 63.5 261 31.0
CAN.G806.11 Capsicum annuum HOM05D003319 ORTHO05D003739 3.9e-08 63.2 227 33.0
Oeu018565.2 Olea europaea HOM05D003319 ORTHO05D003739 3.9e-08 63.2 203 32.0
EL10Ac3g06093 Beta vulgaris HOM05D003319 ORTHO05D003739 8.6e-08 62.0 115 44.3
MELO3C003521.2 Cucumis melo HOM05D003319 ORTHO05D003739 1.5e-07 61.2 72 54.2
RcHm_v2.0_Chr7g0235501 Rosa chinensis HOM05D003319 ORTHO05D003739 3.3e-07 60.1 109 44.0
CDE11G0791 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 4.3e-07 59.7 105 47.6
CAN.G475.23 Capsicum annuum HOM05D003319 ORTHO05D003739 5.6e-07 59.3 150 34.0
Sabra05G0119500 Salix brachista HOM05D003319 ORTHO05D003739 5.6e-07 59.3 78 50.0
CiPaw.08G055800 Carya illinoinensis HOM05D003319 ORTHO05D003739 7.3e-07 58.9 194 35.6
QL01p017023 Quercus lobata HOM05D003319 ORTHO05D003739 2.1e-06 57.4 289 29.1
Solyc04g076360.4 Solanum lycopersicum HOM05D003319 ORTHO05D003739 2.1e-06 57.4 108 44.4
Cfa009865 Carpinus fangiana HOM05D003319 ORTHO05D003739 2.8e-06 57.0 213 33.8
unitig_32.g10947 Utricularia gibba HOM05D003319 ORTHO05D003739 2.8e-06 57.0 109 42.2
MBI16_g19592_MAGBIO Magnolia biondii HOM05D003319 ORTHO05D003739 3.6e-06 56.6 105 46.7
Gorai.002G139000 Gossypium raimondii HOM05D003319 ORTHO05D003739 4.7e-06 56.2 261 29.1
Sed0024254 Sechium edule HOM05D003319 ORTHO05D003739 4.7e-06 56.2 75 54.7
Gohir.D01G114100 Gossypium hirsutum HOM05D003319 ORTHO05D003739 6.2e-06 55.8 245 28.6
PGR031G0455 Punica granatum HOM05D003319 ORTHO05D003739 6.2e-06 55.8 115 46.1
PGR042G0823 Punica granatum HOM05D003319 ORTHO05D003739 6.2e-06 55.8 270 28.1


User provided reference genes

Program Settings