Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012382 Camellia sinensis var. sinensis HOM05D040364 ORTHO05D001590 1.4e-43 179.1 85 100.0
CSS0022351 Camellia sinensis var. sinensis HOM05D040364 ORTHO05D001590 1.0e-41 172.9 85 96.5
CSS0018414 Camellia sinensis var. sinensis HOM05D040364 ORTHO05D001590 1.2e-13 79.7 84 50.0
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-08 62.4 84 38.1
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.7e-08 60.8 84 36.9
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 5.7e-08 60.8 78 39.7
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 5.7e-08 60.8 84 35.7
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 7.4e-08 60.5 81 38.3
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.4e-08 60.5 84 36.9
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.4e-08 60.5 84 36.9
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 1.3e-07 59.7 82 37.8
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.8e-07 57.8 76 36.8
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-06 56.2 83 37.3
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.1e-06 54.7 83 37.3
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 6.9e-06 53.9 74 35.1
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 6.9e-06 53.9 77 35.1
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.1e-06 53.5 81 32.1
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.1e-06 53.5 81 32.1
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.1e-06 53.5 81 32.1


User provided reference genes

Program Settings