Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 5.1e-261 904.0 518 100.0
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 6.6e-75 285.8 640 36.2
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 2.5e-66 257.3 591 36.5
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 1.5e-55 221.5 426 39.7
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 5.8e-55 219.5 391 41.4
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 2.4e-53 214.2 461 36.9
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 6.2e-49 199.5 431 38.5
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 3.1e-48 197.2 433 38.1
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 7.6e-47 192.6 429 36.1
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.4e-45 188.3 434 36.4
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 2.4e-45 187.6 442 36.4
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 3.2e-45 187.2 432 36.1
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 5.5e-45 186.4 434 36.2
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 2.1e-44 184.5 433 36.3
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.1e-44 184.5 423 36.9
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.1e-44 184.5 433 36.3
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.7e-44 184.1 483 33.7
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.0e-44 183.0 433 35.8
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 1.8e-43 181.4 432 35.6
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 3.3e-42 177.2 422 35.8
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 1.3e-41 175.3 432 35.4
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.3e-41 175.3 411 36.0
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 1.6e-41 174.9 438 35.2
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 2.4e-40 171.0 415 35.4
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 2.4e-40 171.0 429 36.1
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 3.1e-40 170.6 391 37.1
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 4.5e-39 166.8 394 35.5
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 2.2e-38 164.5 416 36.3
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 2.9e-38 164.1 427 36.1
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 6.5e-38 162.9 447 34.2
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 5.1e-35 153.3 398 36.2
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 2.5e-34 151.0 408 36.5
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 3.7e-33 147.1 427 33.7
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 1.2e-31 142.1 426 34.5
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 2.6e-31 141.0 348 37.1
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 3.4e-31 140.6 264 39.0
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 7.6e-31 139.4 400 33.0
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 2.2e-30 137.9 375 32.3
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 3.8e-30 137.1 358 36.0
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 1.9e-29 134.8 404 34.9
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 4.2e-29 133.7 389 33.2
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.6e-28 131.7 381 32.3
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 2.7e-28 131.0 362 37.3
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 3.6e-28 130.6 388 31.4
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 4.6e-28 130.2 448 30.8
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 6.1e-28 129.8 383 33.2
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 3.9e-27 127.1 392 33.9
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 5.1e-27 126.7 374 34.8
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 1.9e-26 124.8 398 32.4
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 1.9e-26 124.8 374 32.1
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 4.3e-26 123.6 381 32.0
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 7.4e-26 122.9 389 31.9
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 1.7e-25 121.7 394 32.7
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 2.4e-24 117.9 425 31.3
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 6.9e-24 116.3 426 32.4
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 5.9e-23 113.2 410 29.8
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 7.7e-23 112.8 379 32.5
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 3.8e-22 110.5 418 30.1
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 5.0e-22 110.2 390 31.8
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 6.5e-22 109.8 178 43.8
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 8.5e-22 109.4 405 30.9
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 8.5e-22 109.4 364 31.6
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 3.2e-21 107.5 395 31.1
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 5.5e-21 106.7 354 31.1
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 7.2e-21 106.3 373 31.1
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 2.1e-20 104.8 356 31.5
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 3.6e-20 104.0 316 33.2
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 4.7e-20 103.6 376 32.2
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 6.1e-20 103.2 384 32.0
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 2.3e-19 101.3 353 30.9
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 3.0e-19 100.9 355 31.5
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 3.0e-19 100.9 355 31.5
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 3.9e-19 100.5 397 30.5
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 5.1e-19 100.1 325 33.2
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 2.0e-18 98.2 338 32.2
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 2.6e-18 97.8 437 29.1
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 7.4e-18 96.3 395 30.4
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 9.7e-18 95.9 427 28.3
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 1.3e-17 95.5 384 29.7
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 1.3e-17 95.5 179 40.8
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 1.3e-17 95.5 374 28.9
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 2.8e-17 94.4 392 30.9
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 3.7e-17 94.0 334 31.1
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 6.3e-17 93.2 390 28.5
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 6.3e-17 93.2 384 30.7
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 1.4e-16 92.0 395 30.1
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 2.4e-16 91.3 374 28.6
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 3.1e-16 90.9 391 28.9
Eucgr.K02060 Eucalyptus grandis HOM05D005512 ORTHO05D006716 1.5e-15 88.6 214 34.6
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 2.0e-15 88.2 385 30.1
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 4.2e-13 80.5 305 29.2
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 5.5e-13 80.1 384 30.5
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 5.5e-13 80.1 440 26.4
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 4.7e-12 77.0 209 34.9
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 1.0e-11 75.9 81 54.3
Eucgr.K02061 Eucalyptus grandis HOM05D005512 ORTHO05D006716 8.8e-11 72.8 82 57.3
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 1.1e-10 72.4 360 27.8
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 3.3e-10 70.9 200 35.0
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 5.7e-10 70.1 395 28.6
Psat3g034880 Pisum sativum HOM05D005512 ORTHO05D006716 9.7e-10 69.3 387 28.7
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 1.3e-09 68.9 66 59.1
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 4.8e-09 67.0 292 30.1
Zm00001eb406920 Zea mays HOM05D005512 ORTHO05D006716 1.4e-08 65.5 70 57.1
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 1.8e-08 65.1 66 60.6
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 4.1e-08 63.9 315 30.2
Oeu040522.1 Olea europaea HOM05D005512 ORTHO05D006716 4.1e-08 63.9 344 28.2
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 5.3e-08 63.5 73 54.8
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 3.5e-07 60.8 368 28.8
SalBow3G2059 Salvia bowleyana HOM05D005512 ORTHO05D006716 5.0e-06 57.0 322 26.4
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 6.5e-06 56.6 232 24.1


User provided reference genes

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