Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012253 Camellia sinensis var. sinensis HOM05D006983 ORTHO05D008942 8.3e-88 327.0 167 100.0
CSS0014435 Camellia sinensis var. sinensis HOM05D006983 ORTHO05D008942 5.4e-79 297.7 152 99.3
Dinv20949 Davidia involucrata HOM05D006983 ORTHO05D008942 9.3e-63 243.8 163 73.0
Dinv20994 Davidia involucrata HOM05D006983 ORTHO05D008942 9.3e-63 243.8 163 73.0
vmacro07000 Vaccinium macrocarpon HOM05D006983 ORTHO05D008942 6.0e-62 241.1 166 69.9
Actinidia29673 Actinidia chinensis HOM05D006983 ORTHO05D008942 1.3e-61 240.0 166 68.7
Rhsim03G0139600 Rhododendron simsii HOM05D006983 ORTHO05D008942 4.3e-60 235.0 165 69.7
Manes.10G018300 Manihot esculenta HOM05D006983 ORTHO05D008942 1.7e-56 223.0 166 64.5
TAR623G0945 Trochodendron aralioides HOM05D006983 ORTHO05D008942 2.3e-53 212.6 166 62.7
TWI73G0069 Tripterygium wilfordii HOM05D006983 ORTHO05D008942 3.9e-53 211.8 165 64.2
Haze_17176 Corylus avellana HOM05D006983 ORTHO05D008942 1.1e-52 210.3 168 64.3
Atru.chr12.252 Acer truncatum HOM05D006983 ORTHO05D008942 4.3e-52 208.4 166 60.8
Cpa.g.sc19.223 Carica papaya HOM05D006983 ORTHO05D008942 7.4e-52 207.6 151 64.9
MBI05_g03441_MAGBIO Magnolia biondii HOM05D006983 ORTHO05D008942 9.6e-52 207.2 165 61.2
GSVIVG01016377001 Vitis vinifera HOM05D006983 ORTHO05D008942 1.6e-51 206.5 164 64.0
Ciclev10033883m.g Citrus clementina HOM05D006983 ORTHO05D008942 1.4e-50 203.4 166 59.0
Duzib114G0863 Durio zibethinus HOM05D006983 ORTHO05D008942 9.0e-50 200.7 168 60.7
Potri.010G193500 Populus trichocarpa HOM05D006983 ORTHO05D008942 2.0e-49 199.5 166 59.6
RcHm_v2.0_Chr1g0369271 Rosa chinensis HOM05D006983 ORTHO05D008942 2.0e-49 199.5 155 63.9
Hma1.2p1_0710F.1_g207380 Hydrangea macrophylla HOM05D006983 ORTHO05D008942 3.4e-49 198.7 167 56.9
QL08p062549 Quercus lobata HOM05D006983 ORTHO05D008942 1.3e-48 196.8 162 61.1
Lj1A949T61 Lonicera japonica HOM05D006983 ORTHO05D008942 1.7e-48 196.4 154 61.0
CiPaw.01G295300 Carya illinoinensis HOM05D006983 ORTHO05D008942 3.8e-48 195.3 166 60.8
Nitab4.5_0000278g0220 Nicotiana tabacum HOM05D006983 ORTHO05D007189 1.9e-47 193.0 154 61.7
MD01G1146200 Malus domestica HOM05D006983 ORTHO05D008942 2.5e-47 192.6 153 62.1
FvH4_7g23940 Fragaria vesca HOM05D006983 ORTHO05D008942 3.2e-47 192.2 153 62.7
FAN01G0283 Fragaria x ananassa HOM05D006983 ORTHO05D008942 3.2e-47 192.2 153 62.7
FAN06G2291 Fragaria x ananassa HOM05D006983 ORTHO05D008942 3.2e-47 192.2 153 62.7
FAN10G1282 Fragaria x ananassa HOM05D006983 ORTHO05D008942 7.1e-47 191.0 153 63.4
Duzib106G0752 Durio zibethinus HOM05D006983 ORTHO05D008942 9.3e-47 190.7 155 61.3
Nn2g15918 Nelumbo nucifera HOM05D006983 ORTHO05D008942 1.2e-46 190.3 167 56.3
Thecc.10G027200 Theobroma cacao HOM05D006983 ORTHO05D008942 1.6e-46 189.9 165 59.4
Prupe.2G245400 Prunus persica HOM05D006983 ORTHO05D008942 2.7e-46 189.1 153 60.8
Nitab4.5_0012179g0010 Nicotiana tabacum HOM05D006983 ORTHO05D007189 3.5e-46 188.7 157 61.1
FAN03G3227 Fragaria x ananassa HOM05D006983 ORTHO05D008942 2.3e-45 186.0 153 61.4
Glyma.11G226700 Glycine max HOM05D006983 ORTHO05D008942 2.3e-45 186.0 157 59.2
PGR142G1076 Punica granatum HOM05D006983 ORTHO05D008942 3.9e-45 185.3 160 60.0
COL.COLO4_25671 Corchorus olitorius HOM05D006983 ORTHO05D008942 5.1e-45 184.9 161 60.2
Ca_05926_v3 Cicer arietinum L. HOM05D006983 ORTHO05D008942 6.7e-45 184.5 165 55.8
Glyma.02G253900 Glycine max HOM05D006983 ORTHO05D008942 1.9e-44 183.0 166 55.4
Cc02_g06970 Coffea canephora HOM05D006983 ORTHO05D008942 2.5e-44 182.6 154 59.1
Glyma.18G030500 Glycine max HOM05D006983 ORTHO05D008942 7.4e-44 181.0 158 58.2
MD07G1213100 Malus domestica HOM05D006983 ORTHO05D008942 9.7e-44 180.6 151 60.9
Psat5g127360 Pisum sativum HOM05D006983 ORTHO05D008942 4.8e-43 178.3 154 53.9
Phvul.008G227000 Phaseolus vulgaris HOM05D006983 ORTHO05D008942 1.1e-42 177.2 166 54.2
TPR.G29801 Trifolium pratense HOM05D006983 ORTHO05D008942 1.8e-42 176.4 154 55.2
Psat2g036160 Pisum sativum HOM05D006983 ORTHO05D008942 4.1e-42 175.3 164 51.8
Sabra10G0149000 Salix brachista HOM05D006983 ORTHO05D008942 4.1e-42 175.3 163 52.1
Glyma.14G062600 Glycine max HOM05D006983 ORTHO05D008942 6.9e-42 174.5 165 52.1
DCAR_024839 Daucus carota HOM05D006983 ORTHO05D008942 1.5e-41 173.3 166 53.6
Lalb_Chr10g0104981 Lupinus albus HOM05D006983 ORTHO05D008942 1.5e-41 173.3 154 59.1
arahy.Tifrunner.gnm1.ann1.A3NAV6 Arachis hypogaea HOM05D006983 ORTHO05D008942 2.6e-41 172.6 164 50.6
Medtr5g081740 Medicago truncatula HOM05D006983 ORTHO05D008942 2.6e-41 172.6 149 57.0
Phvul.001G240100 Phaseolus vulgaris HOM05D006983 ORTHO05D008942 2.6e-41 172.6 154 55.2
Sc10g0002160 Simmondsia chinensis HOM05D006983 ORTHO05D008942 3.4e-41 172.2 161 52.8
VMungo1383G1034 Vigna mungo HOM05D006983 ORTHO05D008942 5.9e-41 171.4 154 54.5
arahy.Tifrunner.gnm1.ann1.6C4W0P Arachis hypogaea HOM05D006983 ORTHO05D008942 1.7e-40 169.9 161 49.1
Migut.F00708 Erythranthe guttata HOM05D006983 ORTHO05D008942 2.9e-40 169.1 156 52.6
Gohir.A05G346200 Gossypium hirsutum HOM05D006983 ORTHO05D008942 2.9e-40 169.1 153 54.2
LjContig00357g0002291 Lotus japonicus HOM05D006983 ORTHO05D008942 2.9e-40 169.1 164 50.6
Ca_17141_v3 Cicer arietinum L. HOM05D006983 ORTHO05D008942 3.8e-40 168.7 154 54.5
arahy.Tifrunner.gnm1.ann1.IY3N90 Arachis hypogaea HOM05D006983 ORTHO05D008942 6.5e-40 167.9 161 49.1
Gohir.A10G228900 Gossypium hirsutum HOM05D006983 ORTHO05D008942 1.9e-39 166.4 156 56.4
Gorai.012G075200 Gossypium raimondii HOM05D006983 ORTHO05D008942 1.9e-39 166.4 153 52.9
SalBow5G0486 Salvia bowleyana HOM05D006983 ORTHO05D008942 1.9e-39 166.4 153 51.6
Sed0026510 Sechium edule HOM05D006983 ORTHO05D008942 1.9e-39 166.4 151 51.7
Gohir.D10G242900 Gossypium hirsutum HOM05D006983 ORTHO05D008942 2.5e-39 166.0 156 56.4
DCAR_011784 Daucus carota HOM05D003187 ORTHO05D003630 4.2e-39 165.2 164 52.4
Gorai.011G279300 Gossypium raimondii HOM05D006983 ORTHO05D008942 4.2e-39 165.2 156 55.8
MELO3C025147.2 Cucumis melo HOM05D006983 ORTHO05D008942 5.5e-39 164.9 168 49.4
HanXRQChr14g0458841 Helianthus annuus HOM05D006983 ORTHO05D008942 7.2e-39 164.5 177 49.2
Medtr7g092870 Medicago truncatula HOM05D006983 ORTHO05D008942 7.2e-39 164.5 143 55.9
Medtr3g070090 Medicago truncatula HOM05D006983 ORTHO05D008942 1.2e-38 163.7 153 51.0
Lsat_1_v5_gn_2_120641 Lactuca sativa HOM05D006983 ORTHO05D008942 1.6e-38 163.3 176 50.6
TPR.G40054 Trifolium pratense HOM05D006983 ORTHO05D008942 2.1e-38 162.9 145 51.7
ClCG07G003900 Citrullus lanatus HOM05D006983 ORTHO05D008942 2.7e-38 162.5 138 55.8
CsaV3_5G008850 Cucumis sativus L. HOM05D006983 ORTHO05D008942 2.7e-38 162.5 156 50.6
Lj6g0016213 Lotus japonicus HOM05D006983 ORTHO05D008942 2.7e-38 162.5 139 54.7
VMungo0647G1533 Vigna mungo HOM05D006983 ORTHO05D008942 4.6e-38 161.8 166 51.8
Eucgr.G03025 Eucalyptus grandis HOM05D006983 ORTHO05D008942 6.1e-38 161.4 155 52.9
Gohir.D04G066400 Gossypium hirsutum HOM05D006983 ORTHO05D008942 6.1e-38 161.4 153 52.3
AT2G39920 Arabidopsis thaliana HOM05D006983 ORTHO05D008942 1.4e-37 160.2 152 54.6
AL4G37500 Arabidopsis lyrata HOM05D006983 ORTHO05D008942 5.1e-37 158.3 152 52.6
Carub.0004s2205 Capsella rubella HOM05D006983 ORTHO05D008942 5.1e-37 158.3 153 52.3
ECA238G4046 Erigeron canadensis HOM05D006983 ORTHO05D008942 1.1e-36 157.1 167 49.7
arahy.Tifrunner.gnm1.ann1.10ZGUJ Arachis hypogaea HOM05D006983 ORTHO05D008942 2.5e-36 156.0 145 48.3
Thhalv10017044m.g Eutrema salsugineum HOM05D006983 ORTHO05D008942 7.4e-36 154.5 159 49.7
PSO339G3533 Papaver somniferum HOM05D006983 ORTHO05D008942 7.4e-36 154.5 154 52.6
Aa31LG5G19700 Aethionema arabicum HOM05D006983 ORTHO05D008942 9.7e-36 154.1 154 50.6
PSO384G2074 Papaver somniferum HOM05D006983 ORTHO05D008942 6.3e-35 151.4 154 52.6
CARHR134840 Cardamine hirsuta HOM05D006983 ORTHO05D008942 1.8e-34 149.8 158 48.7
BraA05t19618Z Brassica rapa HOM05D006983 ORTHO05D008942 2.4e-34 149.4 155 50.3
BcaC02g12125 Brassica carinata HOM05D006983 ORTHO05D008942 5.3e-34 148.3 155 50.3
C04p07590 Brassica napus HOM05D006983 ORTHO05D008942 5.3e-34 148.3 155 50.3
BolC4t22375H Brassica oleracea HOM05D006983 ORTHO05D008942 1.5e-33 146.7 154 50.0
ECA233G0306 Erigeron canadensis HOM05D006983 ORTHO05D008942 2.6e-33 146.0 158 49.4
A05p06500 Brassica napus HOM05D006983 ORTHO05D008942 3.4e-33 145.6 155 49.7
Sp4g22230 Schrenkiella parvula HOM05D006983 ORTHO05D008942 5.9e-33 144.8 156 48.1
BcaB02g09071 Brassica carinata HOM05D006983 ORTHO05D008942 1.0e-32 144.1 160 48.8
THA.LOC104810069 Tarenaya hassleriana HOM05D006983 ORTHO05D008942 3.2e-31 139.0 155 52.9
HPP92_015339 Vanilla planifolia HOM05D006983 ORTHO05D008942 3.2e-31 139.0 155 45.2
HanXRQChr12g0369331 Helianthus annuus HOM05D006983 ORTHO05D008942 5.5e-31 138.3 158 51.9
ATR0618G335 Amborella trichopoda HOM05D006983 ORTHO05D008942 6.1e-30 134.8 152 44.7
HanXRQChr07g0202311 Helianthus annuus HOM05D006983 ORTHO05D008942 3.0e-29 132.5 151 46.4
Nn2g13598 Nelumbo nucifera HOM05D006983 ORTHO05D008942 5.0e-24 115.2 101 47.5
Dinv20946 Davidia involucrata HOM05D006983 ORTHO05D008942 1.8e-18 96.7 71 74.6
Dinv20997 Davidia involucrata HOM05D006983 ORTHO05D008942 1.8e-18 96.7 71 74.6
Pp3c5_13290 Physcomitrium patens HOM05D000647 ORTHO05D000485 2.3e-13 79.7 156 34.6
Mapoly0028s0005 Marchantia polymorpha HOM05D000647 ORTHO05D000485 3.0e-13 79.3 148 35.1
Pp3c26_14760 Physcomitrium patens HOM05D000647 ORTHO05D000485 5.2e-13 78.6 150 32.7
Pp3c4_27860 Physcomitrium patens HOM05D000647 ORTHO05D000485 9.7e-12 74.3 150 30.0
Oeu006657.1 Olea europaea HOM05D006983 ORTHO05D008942 1.8e-10 70.1 88 50.0
Pp3c16_1470 Physcomitrium patens HOM05D000647 ORTHO05D000485 9.1e-10 67.8 158 30.4
AagrBONN_evm.TU.Sc2ySwM_344.3268 Anthoceros agrestis HOM05D000647 ORTHO05D000485 2.7e-09 66.2 153 32.7
BcaB06g26858 Brassica carinata HOM05D006983 ORTHO05D008942 1.9e-07 60.1 86 36.0
SMO367G0531 Selaginella moellendorffii HOM05D000647 ORTHO05D000485 3.2e-07 59.3 71 38.0
MBI02_g42753_MAGBIO Magnolia biondii HOM05D006983 ORTHO05D008942 5.5e-07 58.5 61 45.9


User provided reference genes

Program Settings