Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012204 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 1.2e-225 786.2 385 100.0
CSS0024213 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 1.3e-221 772.7 385 98.2
CSS0010561 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 3.0e-149 532.3 380 73.4
CSS0012002 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 7.2e-135 484.6 386 65.5
CSS0027353 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 3.6e-118 429.1 364 59.3
FvH4_4g30830 Fragaria vesca HOM05D010144 ORTHO05D011422 3.7e-38 163.3 372 34.1
Actinidia10958 Actinidia chinensis HOM05D013255 ORTHO05D011422 4.8e-38 162.9 243 36.6
Prupe.5G157900 Prunus persica HOM05D013255 ORTHO05D011422 4.2e-34 149.8 337 32.0
FvH4_4g30880 Fragaria vesca HOM05D010144 ORTHO05D011422 2.5e-26 124.0 332 31.0
FvH4_4g30861 Fragaria vesca HOM05D010144 ORTHO05D011422 1.0e-24 118.6 342 30.4
FAN17G0220 Fragaria x ananassa HOM05D010144 ORTHO05D011422 1.4e-24 118.2 232 34.5
DCAR_025514 Daucus carota HOM05D013255 ORTHO05D011422 1.5e-23 114.8 361 30.5
MD15G1041200 Malus domestica HOM05D013255 ORTHO05D011422 1.5e-23 114.8 344 29.4
FAN17G0905 Fragaria x ananassa HOM05D010144 ORTHO05D011422 2.6e-23 114.0 379 28.5
FvH4_4g30890 Fragaria vesca HOM05D010144 ORTHO05D011422 3.7e-22 110.2 344 30.2
FvH4_4g30870 Fragaria vesca HOM05D010144 ORTHO05D011422 1.2e-20 105.1 270 33.3
Lj5P564T10 Lonicera japonica HOM05D012292 ORTHO05D012234 1.6e-20 104.8 298 29.2
RcHm_v2.0_Chr2g0136121 Rosa chinensis HOM05D017060 ORTHO05D012234 1.0e-19 102.1 228 34.2
FAN14G1842 Fragaria x ananassa HOM05D010144 ORTHO05D011422 1.3e-19 101.7 408 27.2
FvH4_6g44333 Fragaria vesca HOM05D010144 ORTHO05D011422 2.5e-18 97.4 408 26.7
Lj5P260T19 Lonicera japonica HOM05D012292 ORTHO05D012234 4.2e-18 96.7 362 27.1
Lj5C264T5 Lonicera japonica HOM05D012292 ORTHO05D012234 5.5e-18 96.3 334 25.1
Lj5A253T37 Lonicera japonica HOM05D012292 ORTHO05D012234 4.7e-17 93.2 284 31.0
Lju3917C0T1 Lonicera japonica HOM05D012292 ORTHO05D012234 8.0e-17 92.4 334 24.6
Lj5E258T0 Lonicera japonica HOM05D012292 ORTHO05D012234 1.4e-16 91.7 211 29.9
FAN05G1166 Fragaria x ananassa HOM05D010144 ORTHO05D011422 1.5e-15 88.2 293 28.0
Lj5C264T6 Lonicera japonica HOM05D012292 ORTHO05D012234 2.0e-15 87.8 334 24.3
FvH4_6g44332 Fragaria vesca HOM05D010144 ORTHO05D011422 1.4e-13 81.6 405 23.7
MD15G1401000 Malus domestica HOM05D013255 ORTHO05D011422 1.8e-13 81.3 214 29.0
Rhsim11G0054100 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.1e-13 80.5 297 27.6
Lj5A250G20 Lonicera japonica HOM05D012292 ORTHO05D012234 1.6e-12 78.2 277 27.1
FAN17G3053 Fragaria x ananassa HOM05D010144 ORTHO05D011422 3.5e-12 77.0 255 27.8
Rhsim02G0161800 Rhododendron simsii HOM05D015811 ORTHO05D014676 1.0e-11 75.5 347 25.4
Lju3917C0T2 Lonicera japonica HOM05D012292 ORTHO05D012234 6.5e-11 72.8 256 23.8
CSS0005823 Camellia sinensis var. sinensis HOM05D015193 ORTHO05D005682 8.5e-11 72.4 185 29.2
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 2.7e-09 67.4 255 23.9
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 2.7e-09 67.4 207 29.5
CSS0000622 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 1.8e-08 64.7 215 26.0
Lj5A265T30 Lonicera japonica HOM05D012292 ORTHO05D012234 4.0e-08 63.5 170 28.2
CSS0029958 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 5.2e-08 63.2 215 28.4
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 1.2e-07 62.0 152 30.3
COL.COLO4_16992 Corchorus olitorius HOM05D017991 ORTHO05D020493 2.0e-07 61.2 318 25.8
Prupe.5G008800 Prunus persica HOM05D013255 ORTHO05D011422 2.0e-07 61.2 113 36.3
Dinv24224 Davidia involucrata HOM05D015193 ORTHO05D005682 2.6e-07 60.8 127 30.7
PGR031G1460 Punica granatum HOM05D023452 ORTHO05D019051 3.4e-07 60.5 149 29.5
FAN16G3529 Fragaria x ananassa HOM05D040715 ORTHO05D035629 7.5e-07 59.3 118 36.4
COL.COLO4_16993 Corchorus olitorius HOM05D017991 ORTHO05D020493 1.7e-06 58.2 215 27.0
PGR031G0854 Punica granatum HOM05D023452 ORTHO05D019051 3.7e-06 57.0 174 27.0
Lj2P199T12 Lonicera japonica HOM05D021051 ORTHO05D012833 4.8e-06 56.6 116 30.2
Thecc.03G305700 Theobroma cacao HOM05D017991 ORTHO05D020493 6.3e-06 56.2 182 26.9


User provided reference genes

Program Settings