Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.8e-224 781.6 379 100.0
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.8e-224 781.6 379 100.0
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 1.9e-196 689.1 379 86.3
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.9e-189 665.2 379 84.2
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 3.0e-186 655.2 379 81.3
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 1.1e-175 620.2 398 74.9
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 6.6e-173 610.9 379 74.9
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 7.3e-172 607.4 379 74.9
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 1.2e-171 606.7 381 75.9
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 1.0e-170 603.6 379 76.0
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 1.0e-170 603.6 379 74.4
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 1.4e-170 603.2 375 75.2
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 8.9e-170 600.5 379 73.9
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 4.4e-169 598.2 379 75.2
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 3.2e-167 592.0 380 73.4
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 2.1e-163 579.3 381 75.1
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 2.8e-163 578.9 372 73.4
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 4.0e-162 575.1 372 73.4
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 1.2e-155 553.5 382 68.3
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 3.6e-155 552.0 379 68.6
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 5.2e-154 548.1 379 67.5
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 5.2e-154 548.1 378 67.7
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 5.8e-153 544.7 379 66.8
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.2e-152 542.7 378 66.7
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 3.7e-152 542.0 378 66.9
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 1.9e-151 539.7 380 68.9
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 7.1e-151 537.7 374 68.7
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 1.6e-150 536.6 378 66.7
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.1e-150 536.2 379 68.6
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 2.7e-150 535.8 379 66.8
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 6.0e-150 534.6 402 66.7
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 7.8e-150 534.3 379 68.3
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 7.8e-150 534.3 379 67.5
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.7e-149 533.1 379 68.3
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 3.0e-149 532.3 374 67.1
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 3.9e-149 531.9 378 65.9
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 1.9e-148 529.6 377 66.6
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 1.9e-148 529.6 380 66.6
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 2.5e-148 529.3 376 66.2
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 1.6e-147 526.6 379 65.4
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 6.2e-147 524.6 379 63.1
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 4.0e-146 521.9 376 65.2
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 4.0e-146 521.9 410 61.5
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 6.8e-146 521.2 378 64.8
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 8.9e-146 520.8 379 66.2
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 1.2e-145 520.4 376 63.8
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 1.5e-145 520.0 378 65.9
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 1.7e-144 516.5 356 66.6
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 1.4e-143 513.5 374 64.2
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 1.4e-143 513.5 375 64.5
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 1.9e-143 513.1 424 60.6
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 4.1e-143 511.9 373 63.8
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 7.8e-142 507.7 368 64.9
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 1.0e-141 507.3 375 65.1
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 1.0e-141 507.3 373 64.9
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 1.7e-141 506.5 379 64.9
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 2.3e-141 506.1 374 63.9
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 3.0e-141 505.8 375 65.3
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 3.3e-140 502.3 373 65.7
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 2.1e-139 499.6 373 63.5
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 2.1e-139 499.6 375 64.5
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 3.6e-139 498.8 377 63.4
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 4.7e-139 498.4 372 64.0
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 1.8e-138 496.5 302 78.8
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 6.9e-138 494.6 356 65.4
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 9.0e-138 494.2 379 61.2
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 1.2e-137 493.8 361 66.2
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 7.6e-137 491.1 381 60.6
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 3.8e-136 488.8 379 67.5
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 6.4e-136 488.0 379 61.5
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 8.4e-136 487.6 352 65.1
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 1.1e-135 487.3 361 65.4
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 1.1e-135 487.3 378 63.8
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.4e-135 486.9 372 59.9
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 4.6e-134 481.9 278 83.5
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 1.5e-132 476.9 378 60.8
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 1.9e-132 476.5 376 61.4
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 3.3e-132 475.7 381 59.6
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 4.3e-132 475.3 378 60.8
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 1.3e-131 473.8 378 60.6
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 1.3e-131 473.8 382 59.9
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 1.3e-131 473.8 379 59.4
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 5.3e-130 468.4 378 60.1
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 9.0e-130 467.6 376 58.2
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 3.4e-129 465.7 374 60.7
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 1.3e-128 463.8 379 59.9
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 1.3e-128 463.8 379 59.9
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 2.9e-128 462.6 377 56.0
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 6.4e-128 461.5 373 59.8
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.4e-127 460.3 373 60.1
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 2.4e-127 459.5 355 63.4
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 5.4e-127 458.4 253 85.4
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 5.4e-127 458.4 326 66.6
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 1.8e-125 453.4 352 61.1
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 2.3e-125 453.0 379 60.4
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 1.1e-124 450.7 376 57.2
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.1e-124 450.7 373 59.0
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 1.2e-121 440.7 381 60.1
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 1.1e-119 434.1 323 65.0
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 4.2e-119 432.2 376 55.6
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 3.9e-117 425.6 304 66.8
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 8.2e-107 391.3 287 66.9
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 2.6e-105 386.3 284 65.5
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 5.9e-105 385.2 274 67.9
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 1.2e-102 377.5 259 68.0
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 7.7e-97 358.2 396 49.0
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 2.9e-96 356.3 376 48.7
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 1.5e-92 344.0 362 47.0
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 2.0e-92 343.6 340 51.5
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 3.3e-92 342.8 386 44.0
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 2.9e-88 329.7 225 68.0
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 8.0e-86 321.6 373 43.4
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 4.1e-82 309.3 216 67.1
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 5.0e-80 302.4 186 73.7
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 1.4e-74 284.3 193 68.9
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 1.6e-70 270.8 390 36.2
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 6.1e-54 215.7 170 61.8
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 8.6e-48 195.3 148 62.8
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 8.9e-45 185.3 201 53.2
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 3.0e-32 143.7 128 55.5
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 1.1e-29 135.2 110 57.3
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 7.6e-28 129.0 86 70.9
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 4.8e-14 83.2 79 51.9
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 5.8e-12 76.3 142 34.5
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 4.9e-11 73.2 45 60.0


User provided reference genes

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