Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012173 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 9.3e-77 290.0 138 100.0
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 2.0e-26 122.9 66 81.8
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 2.9e-25 119.0 65 83.1
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 4.1e-24 115.2 63 84.1
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 5.4e-24 114.8 65 75.4
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 2.5e-21 105.9 62 77.4
COL.COLO4_27263 Corchorus olitorius HOM05D010859 ORTHO05D010098 1.3e-14 83.6 61 67.2
QL02p035617 Quercus lobata HOM05D000348 ORTHO05D021052 1.5e-13 80.1 47 78.7
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 5.6e-13 78.2 43 76.7
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 1.6e-12 76.6 70 51.4
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 2.6e-10 69.3 77 49.4
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 2.6e-10 69.3 78 47.4
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 9.8e-10 67.4 61 54.1
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 2.2e-09 66.2 61 52.5
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 2.9e-09 65.9 78 48.7
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 4.9e-09 65.1 59 54.2
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 4.9e-09 65.1 59 54.2
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 4.9e-09 65.1 59 54.2
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 2.4e-08 62.8 61 50.8
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 2.4e-08 62.8 61 50.8
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 2.4e-08 62.8 61 50.8
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 2.4e-08 62.8 61 50.8
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 5.4e-08 61.6 56 55.4
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 9.2e-08 60.8 57 54.4
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 1.6e-07 60.1 61 49.2
VMungo0251G2879 Vigna mungo HOM05D000807 ORTHO05D009770 3.5e-07 58.9 36 77.8
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 4.6e-07 58.5 65 46.2
Psat1g079920 Pisum sativum HOM05D000315 ORTHO05D000527 1.7e-06 56.6 68 41.2


User provided reference genes

Program Settings