Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 5.9e-80 300.8 153 100.0
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 5.9e-80 300.8 153 100.0
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.0e-32 142.9 144 57.6
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 1.1e-30 137.1 158 54.4
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 2.5e-30 136.0 163 51.5
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 3.3e-30 135.6 157 56.7
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.2e-29 133.7 158 55.1
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 8.0e-29 131.0 152 56.6
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 1.0e-28 130.6 158 55.1
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 4.0e-28 128.6 173 49.7
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 4.0e-28 128.6 153 55.6
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 6.8e-28 127.9 148 51.4
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.5e-27 126.7 164 48.8
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 1.5e-27 126.7 143 55.2
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 2.0e-27 126.3 168 49.4
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 2.0e-27 126.3 145 55.2
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 2.0e-27 126.3 155 50.3
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 2.6e-27 125.9 164 48.8
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.4e-27 125.6 170 46.5
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.4e-27 125.6 164 48.2
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 4.4e-27 125.2 152 51.3
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 4.4e-27 125.2 150 50.7
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 4.4e-27 125.2 148 54.1
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 5.8e-27 124.8 142 52.8
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 7.5e-27 124.4 168 46.4
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 7.5e-27 124.4 170 48.2
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 9.8e-27 124.0 146 54.8
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 1.3e-26 123.6 160 51.2
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.7e-26 123.2 172 49.4
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.7e-26 122.1 177 46.9
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 4.9e-26 121.7 159 49.1
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 4.9e-26 121.7 172 46.5
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 4.9e-26 121.7 154 50.0
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 6.4e-26 121.3 173 50.3
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 8.3e-26 120.9 155 49.7
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 1.9e-25 119.8 169 48.5
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 1.9e-25 119.8 160 51.9
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 2.4e-25 119.4 167 47.9
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.4e-25 119.4 148 50.0
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 5.4e-25 118.2 171 44.4
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 7.0e-25 117.9 152 51.3
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 7.0e-25 117.9 163 46.6
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 1.2e-24 117.1 182 45.6
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.2e-24 117.1 148 47.3
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 2.0e-24 116.3 167 46.7
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 2.7e-24 115.9 143 53.1
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.7e-24 115.9 173 47.4
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 2.7e-24 115.9 135 54.1
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 3.5e-24 115.5 173 46.8
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 6.0e-24 114.8 119 59.7
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 1.0e-23 114.0 158 45.6
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.0e-23 114.0 146 50.7
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 1.7e-23 113.2 154 48.7
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 6.6e-23 111.3 153 47.7
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 6.6e-23 111.3 169 44.4
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 6.6e-23 111.3 142 50.7
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 8.6e-23 110.9 152 48.7
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 8.6e-23 110.9 158 50.6
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.5e-22 110.2 150 46.7
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 9.5e-22 107.5 146 49.3
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 1.2e-21 107.1 162 43.8
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 3.6e-21 105.5 145 48.3
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 4.7e-21 105.1 152 45.4
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 8.1e-21 104.4 158 46.8
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 8.1e-21 104.4 159 46.5
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 8.1e-21 104.4 141 51.8
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 1.1e-20 104.0 146 49.3
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 2.3e-20 102.8 156 46.2
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 2.3e-20 102.8 146 50.7
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 3.1e-20 102.4 152 46.7
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.1e-20 102.4 141 44.7
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 8.9e-20 100.9 140 49.3
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 8.9e-20 100.9 140 44.3
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 8.9e-20 100.9 161 44.7
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.0e-19 99.8 158 46.2
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 2.0e-19 99.8 156 44.2
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 3.4e-19 99.0 90 63.3
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 3.4e-19 99.0 159 42.8
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 9.8e-19 97.4 140 42.9
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 9.8e-19 97.4 123 55.3
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 9.8e-19 97.4 154 43.5
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 2.2e-18 96.3 156 40.4
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 2.2e-18 96.3 172 40.7
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.9e-18 95.9 140 42.1
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 6.4e-18 94.7 143 47.6
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 1.1e-17 94.0 144 43.8
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.2e-17 92.4 141 44.7
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 3.2e-17 92.4 141 44.7
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 3.2e-17 92.4 146 45.2
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 4.1e-17 92.0 173 41.0
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 5.4e-17 91.7 145 45.5
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 7.1e-17 91.3 90 63.3
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 1.2e-16 90.5 157 41.4
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 1.6e-16 90.1 124 46.0
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 2.1e-16 89.7 141 44.0
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 2.7e-16 89.4 143 42.0
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 6.0e-16 88.2 150 42.0
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 7.8e-16 87.8 148 39.2
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.0e-15 87.4 103 55.3
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 1.3e-15 87.0 147 46.3
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 1.7e-15 86.7 159 42.1
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 1.7e-15 86.7 138 43.5
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 5.1e-15 85.1 147 39.5
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 5.1e-15 85.1 101 55.4
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 8.6e-15 84.3 141 44.7
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 1.1e-14 84.0 173 36.4
Atru.chr6.3543 Acer truncatum HOM05D005211 ORTHO05D006148 1.5e-14 83.6 145 40.7
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 1.9e-14 83.2 142 40.1
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 2.5e-14 82.8 106 47.2
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 9.5e-14 80.9 151 38.4
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 1.2e-13 80.5 167 36.5
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 1.6e-13 80.1 116 47.4
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 2.1e-13 79.7 147 37.4
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.7e-13 78.6 102 46.1
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 8.1e-13 77.8 107 50.5
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 1.1e-12 77.4 136 41.2
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 1.4e-12 77.0 141 42.6
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 2.3e-12 76.3 142 42.3
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 4.0e-12 75.5 143 41.3
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 1.5e-11 73.6 139 42.4
Ah.11g050990 Amaranthus hybridus HOM05D005211 ORTHO05D006148 1.5e-11 73.6 119 40.3
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.0e-11 73.2 100 46.0
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 2.6e-11 72.8 142 41.5
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 2.6e-11 72.8 142 41.5
QL10p006175 Quercus lobata HOM05D000022 ORTHO05D006148 5.8e-11 71.6 76 51.3
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 7.6e-11 71.2 85 55.3
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 1.3e-10 70.5 86 57.0
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 1.7e-10 70.1 141 39.7
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 1.7e-10 70.1 168 33.3
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 1.7e-10 70.1 140 39.3
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 2.9e-10 69.3 139 39.6
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 2.9e-10 69.3 139 39.6
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 2.9e-10 69.3 147 40.1
Zm00001eb432720 Zea mays HOM05D005211 ORTHO05D006148 6.4e-10 68.2 181 31.5
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 1.9e-09 66.6 98 44.9
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 2.4e-09 66.2 140 36.4
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 2.4e-09 66.2 140 36.4
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 4.1e-09 65.5 140 35.7
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 4.1e-09 65.5 140 35.7
C04p04120 Brassica napus HOM05D005211 ORTHO05D006148 7.1e-09 64.7 139 36.7
C04p70060 Brassica napus HOM05D005211 ORTHO05D006148 1.6e-08 63.5 135 38.5
BolC4t28506H Brassica oleracea HOM05D005211 ORTHO05D006148 1.6e-08 63.5 135 38.5
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 3.0e-07 59.3 149 33.6


User provided reference genes

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