Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 3.1e-84 315.1 158 100.0
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 7.0e-52 207.6 161 65.8
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 1.3e-50 203.4 155 69.0
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 6.8e-47 191.0 137 71.5
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 8.8e-47 190.7 158 65.8
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 2.0e-43 179.5 154 59.1
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 4.7e-40 168.3 97 78.4
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 4.7e-40 168.3 96 78.1
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 4.7e-40 168.3 165 52.1
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 1.4e-39 166.8 96 78.1
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 1.8e-39 166.4 96 78.1
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 2.3e-39 166.0 158 54.4
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 4.0e-39 165.2 154 55.2
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 4.0e-39 165.2 96 77.1
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 8.8e-39 164.1 152 59.2
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 2.6e-38 162.5 96 77.1
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 4.4e-38 161.8 168 54.2
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 5.7e-38 161.4 163 52.8
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 7.5e-38 161.0 155 54.8
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.7e-37 159.8 118 67.8
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 3.7e-37 158.7 144 57.6
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 4.9e-37 158.3 165 50.9
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 4.9e-37 158.3 88 80.7
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 8.3e-37 157.5 158 51.9
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 8.3e-37 157.5 164 50.0
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 1.1e-36 157.1 160 53.1
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 1.4e-36 156.8 93 77.4
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.4e-36 156.8 165 53.3
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 1.4e-36 156.8 165 53.3
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 1.8e-36 156.4 155 51.6
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 3.1e-36 155.6 156 52.6
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 3.1e-36 155.6 157 56.1
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 4.1e-36 155.2 87 79.3
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 4.1e-36 155.2 87 79.3
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 5.4e-36 154.8 164 50.0
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 5.4e-36 154.8 103 68.9
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 1.6e-35 153.3 164 51.8
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 2.0e-35 152.9 160 50.6
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 2.0e-35 152.9 165 52.7
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 2.7e-35 152.5 164 48.8
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 4.5e-35 151.8 125 61.6
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 7.7e-35 151.0 163 51.5
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 1.0e-34 150.6 93 74.2
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 1.3e-34 150.2 163 50.3
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 1.3e-34 150.2 108 61.1
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 1.7e-34 149.8 156 49.4
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 1.7e-34 149.8 101 69.3
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 2.3e-34 149.4 164 49.4
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.3e-34 149.4 145 53.8
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 5.0e-34 148.3 93 74.2
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 8.6e-34 147.5 91 72.5
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 1.1e-33 147.1 158 51.9
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 1.9e-33 146.4 100 68.0
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 7.3e-33 144.4 113 61.1
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 9.5e-33 144.1 138 53.6
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 9.5e-33 144.1 110 60.0
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.6e-32 143.3 94 69.1
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.6e-32 143.3 94 69.1
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.6e-32 143.3 94 69.1
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 2.1e-32 142.9 91 68.1
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 2.8e-32 142.5 145 53.8
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 4.7e-32 141.7 100 65.0
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 6.1e-32 141.4 151 53.0
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 1.0e-31 140.6 147 52.4
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 1.4e-31 140.2 109 62.4
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 2.3e-31 139.4 119 61.3
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 4.0e-31 138.7 98 62.2
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 6.8e-31 137.9 81 75.3
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 8.9e-31 137.5 105 59.0
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 1.5e-30 136.7 117 58.1
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 1.5e-30 136.7 88 71.6
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 2.0e-30 136.3 89 68.5
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 2.6e-30 136.0 84 69.0
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 4.4e-30 135.2 98 59.2
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 4.4e-30 135.2 165 43.6
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 5.7e-30 134.8 104 57.7
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 5.7e-30 134.8 90 67.8
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 7.5e-30 134.4 98 59.2
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 7.5e-30 134.4 98 59.2
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 7.5e-30 134.4 98 59.2
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 1.7e-29 133.3 98 58.2
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 1.7e-29 133.3 98 58.2
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 1.7e-29 133.3 98 58.2
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 2.9e-29 132.5 95 61.1
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 1.1e-28 130.6 98 57.1
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 3.2e-28 129.0 97 63.9
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 4.1e-28 128.6 99 58.6
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 1.6e-27 126.7 150 48.0
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 5.9e-27 124.8 75 70.7
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 1.0e-23 114.0 88 60.2
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 1.0e-23 114.0 86 61.6
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 3.1e-23 112.5 80 60.0
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 5.2e-23 111.7 80 61.2
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 9.8e-22 107.5 117 47.0
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 5.4e-20 101.7 79 54.4
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 5.4e-20 101.7 116 44.0
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 7.8e-19 97.8 92 51.1
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 1.0e-18 97.4 98 48.0
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 1.0e-18 97.4 98 48.0
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 5.8e-14 81.6 48 70.8
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 8.3e-13 77.8 49 69.4


User provided reference genes

Program Settings