Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012136 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 1.7e-241 839.0 435 100.0
CSS0004945 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 4.4e-189 664.8 427 84.5
CSS0027781 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 3.3e-128 462.6 659 47.0
Rhsim11G0036600 Rhododendron simsii HOM05D001176 ORTHO05D007019 4.3e-128 462.2 691 45.7
GSVIVG01013198001 Vitis vinifera HOM05D001176 ORTHO05D007019 1.5e-120 437.2 653 44.9
Peaxi162Scf00193g00811 Petunia axillaris HOM05D001176 ORTHO05D007019 8.2e-119 431.4 650 44.8
TAR375G1104 Trochodendron aralioides HOM05D001176 ORTHO05D007019 3.1e-118 429.5 661 43.9
Nn1g09379 Nelumbo nucifera HOM05D001176 ORTHO05D007019 4.1e-118 429.1 625 44.5
Lj9C202G6 Lonicera japonica HOM05D001176 ORTHO05D007019 5.3e-118 428.7 663 43.6
Nitab4.5_0001333g0050 Nicotiana tabacum HOM05D001176 ORTHO05D007019 1.5e-117 427.2 630 45.2
Cc08_g05630 Coffea canephora HOM05D001176 ORTHO05D007019 2.0e-117 426.8 665 44.2
HanXRQChr03g0068151 Helianthus annuus HOM05D001176 ORTHO05D007019 2.2e-116 423.3 657 43.4
Atru.chr8.2633 Acer truncatum HOM05D001176 ORTHO05D007019 2.9e-116 422.9 665 44.5
Duzib205G1840 Durio zibethinus HOM05D001176 ORTHO05D007019 8.5e-116 421.4 660 43.5
Manes.15G189800 Manihot esculenta HOM05D001176 ORTHO05D007019 8.5e-116 421.4 659 43.6
COL.COLO4_11286 Corchorus olitorius HOM05D001176 ORTHO05D007019 1.4e-115 420.6 655 44.0
CiPaw.11G075700 Carya illinoinensis HOM05D001176 ORTHO05D007019 1.9e-115 420.2 658 43.9
Nitab4.5_0000030g0410 Nicotiana tabacum HOM05D001176 ORTHO05D007019 7.2e-115 418.3 659 43.4
DCAR_001483 Daucus carota HOM05D001176 ORTHO05D007019 1.2e-114 417.5 654 43.7
CAN.G930.8 Capsicum annuum HOM05D001176 ORTHO05D007019 2.7e-114 416.4 659 43.2
AUR62017508 Chenopodium quinoa HOM05D001176 ORTHO05D007019 3.6e-114 416.0 658 43.0
Thecc.03G318700 Theobroma cacao HOM05D001176 ORTHO05D007019 3.6e-114 416.0 660 43.2
Gohir.D08G170700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 6.1e-114 415.2 628 43.9
Ca_25034_v3 Cicer arietinum L. HOM05D001176 ORTHO05D007019 2.3e-113 413.3 661 43.6
Sabra01G0180800 Salix brachista HOM05D001176 ORTHO05D007019 2.3e-113 413.3 661 43.1
Lj2g0027044 Lotus japonicus HOM05D001176 ORTHO05D007019 3.0e-113 412.9 661 43.4
Solyc08g075440.4 Solanum lycopersicum HOM05D001176 ORTHO05D007019 3.0e-113 412.9 659 42.8
Sopen08g024070 Solanum pennellii HOM05D001176 ORTHO05D007019 3.0e-113 412.9 659 42.8
Potri.004G236600 Populus trichocarpa HOM05D001176 ORTHO05D007019 5.1e-113 412.1 662 43.1
SalBow4G1488 Salvia bowleyana HOM05D001176 ORTHO05D007019 2.0e-112 410.2 662 42.4
Medtr5g025410 Medicago truncatula HOM05D001176 ORTHO05D007019 4.3e-112 409.1 661 43.6
AUR62015049 Chenopodium quinoa HOM05D001176 ORTHO05D007019 7.4e-112 408.3 570 47.2
MBI04_g37458_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D007019 9.7e-112 407.9 658 41.8
Eucgr.D02557 Eucalyptus grandis HOM05D001176 ORTHO05D007019 1.3e-111 407.5 658 43.3
Migut.A00530 Erythranthe guttata HOM05D001176 ORTHO05D007019 3.7e-111 406.0 661 43.3
ECA240G2428 Erigeron canadensis HOM05D001176 ORTHO05D007019 4.8e-111 405.6 658 42.1
Gorai.004G178200 Gossypium raimondii HOM05D001176 ORTHO05D007019 4.8e-111 405.6 657 42.0
Gohir.D08G170800 Gossypium hirsutum HOM05D001176 ORTHO05D007019 1.4e-110 404.1 657 42.0
MELO3C010519.2 Cucumis melo HOM05D001176 ORTHO05D007019 1.8e-110 403.7 660 42.3
Prupe.1G077200 Prunus persica HOM05D001176 ORTHO05D007019 2.4e-110 403.3 660 43.0
Psat2g146720 Pisum sativum HOM05D001176 ORTHO05D007019 3.1e-110 402.9 661 43.9
MSTRG.25741 Avicennia marina HOM05D001176 ORTHO05D007019 4.1e-110 402.5 663 42.2
Gohir.A08G149700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 1.2e-109 401.0 654 41.7
Lalb_Chr16g0380331 Lupinus albus HOM05D001176 ORTHO05D007019 1.2e-109 401.0 662 42.9
Sed0008250 Sechium edule HOM05D001176 ORTHO05D007019 1.2e-109 401.0 655 42.0
Ah.05g167880 Amaranthus hybridus HOM05D001176 ORTHO05D007019 5.9e-109 398.7 695 40.6
Lalb_Chr09g0324961 Lupinus albus HOM05D001176 ORTHO05D007019 5.9e-109 398.7 656 42.8
Sc21g0000770 Simmondsia chinensis HOM05D001176 ORTHO05D007019 7.7e-109 398.3 658 42.4
PGR031G2625 Punica granatum HOM05D001176 ORTHO05D007019 1.0e-108 397.9 664 41.9
EL10Ac5g11241 Beta vulgaris HOM05D001176 ORTHO05D007019 1.3e-108 397.5 663 42.2
Glyma.11G090100 Glycine max HOM05D001176 ORTHO05D007019 1.3e-108 397.5 659 42.8
PSO732G0580 Papaver somniferum HOM05D001176 ORTHO05D007019 2.2e-108 396.7 661 41.8
Ciclev10011152m.g Citrus clementina HOM05D001176 ORTHO05D007019 3.8e-108 396.0 651 43.5
Haze_02517 Corylus avellana HOM05D001176 ORTHO05D007019 3.8e-108 396.0 700 42.0
Oeu039635.2 Olea europaea HOM05D001176 ORTHO05D007019 1.1e-107 394.4 708 41.1
PSO675G7478 Papaver somniferum HOM05D001176 ORTHO05D007019 1.2e-106 391.0 661 41.5
RcHm_v2.0_Chr6g0304421 Rosa chinensis HOM05D001176 ORTHO05D007019 2.1e-106 390.2 656 42.2
Aqoxy7G00899 Aquilegia oxysepala HOM05D001176 ORTHO05D007019 2.7e-106 389.8 659 41.9
FAN27G0701 Fragaria x ananassa HOM05D001176 ORTHO05D007019 2.7e-106 389.8 654 42.2
CsaV3_4G027950 Cucumis sativus L. HOM05D001176 ORTHO05D007019 3.6e-106 389.4 659 41.4
Lsat_1_v5_gn_9_124460 Lactuca sativa HOM05D001176 ORTHO05D007019 4.7e-106 389.0 673 41.0
Phvul.002G121100 Phaseolus vulgaris HOM05D001176 ORTHO05D007019 6.1e-106 388.7 659 42.5
Actinidia01255 Actinidia chinensis HOM05D001176 ORTHO05D007019 1.8e-105 387.1 571 45.5
SGA_v2.0_scaffold96G29093 Striga asiatica HOM05D001176 ORTHO05D007019 2.2e-103 380.2 765 37.5
FAN20G0920 Fragaria x ananassa HOM05D001176 ORTHO05D007019 2.8e-103 379.8 654 41.6
VMungo1215G1610 Vigna mungo HOM05D001176 ORTHO05D007019 3.1e-102 376.3 659 41.9
TWI79G0428 Tripterygium wilfordii HOM05D001176 ORTHO05D007019 1.2e-101 374.4 656 41.9
ATR0665G266 Amborella trichopoda HOM05D001176 ORTHO05D007019 1.5e-101 374.0 661 40.2
ClCG11G016030 Citrullus lanatus HOM05D001176 ORTHO05D007019 1.0e-100 371.3 659 40.2
TPR.G8989 Trifolium pratense HOM05D001176 ORTHO05D007019 1.1e-96 357.8 615 41.5
unitig_748.g7392 Utricularia gibba HOM05D001176 ORTHO05D007019 1.1e-96 357.8 654 39.6
CDE04G2738 Ceratophyllum demersum HOM05D001176 ORTHO05D007019 1.7e-92 344.0 660 38.5
Carub.0001s3008 Capsella rubella HOM05D001176 ORTHO05D007019 1.1e-91 341.3 653 38.6
AT1G31780 Arabidopsis thaliana HOM05D001176 ORTHO05D007019 9.4e-91 338.2 653 38.4
Sp1g27470 Schrenkiella parvula HOM05D001176 ORTHO05D007019 9.4e-91 338.2 653 38.4
BcaB07g32825 Brassica carinata HOM05D001176 ORTHO05D007019 1.6e-90 337.4 653 38.3
Aa31LG2G14290 Aethionema arabicum HOM05D001176 ORTHO05D007019 2.1e-90 337.0 655 38.6
AL1G45850 Arabidopsis lyrata HOM05D001176 ORTHO05D007019 3.6e-90 336.3 653 38.0
A09p34570 Brassica napus HOM05D001176 ORTHO05D007019 8.0e-90 335.1 653 38.3
BraA09t38996Z Brassica rapa HOM05D001176 ORTHO05D007019 8.0e-90 335.1 653 38.3
CARHR031080 Cardamine hirsuta HOM05D001176 ORTHO05D007019 1.0e-89 334.7 652 38.0
BcaC05g27192 Brassica carinata HOM05D001176 ORTHO05D007019 2.3e-89 333.6 653 38.1
BolC5t31821H Brassica oleracea HOM05D001176 ORTHO05D007019 2.3e-89 333.6 653 38.1
Cpa.g.sc90.31 Carica papaya HOM05D001176 ORTHO05D007019 5.2e-89 332.4 663 38.2
Thhalv10006980m.g Eutrema salsugineum HOM05D001176 ORTHO05D007019 1.5e-88 330.9 654 37.9
THA.LOC104798522 Tarenaya hassleriana HOM05D001176 ORTHO05D007019 1.5e-88 330.9 656 38.0
C05p30980 Brassica napus HOM05D001176 ORTHO05D007019 6.3e-87 325.5 653 37.5
Actinidia32787 Actinidia chinensis HOM05D001176 ORTHO05D007019 1.1e-86 324.7 443 47.6
SEGI_32977 Sequoiadendron giganteum HOM05D001176 ORTHO05D007019 2.7e-85 320.1 669 36.0
Zm00001eb009310 Zea mays HOM05D001176 ORTHO05D007019 8.3e-79 298.5 625 37.3
HPP92_018761 Vanilla planifolia HOM05D001176 ORTHO05D007019 1.1e-75 288.1 573 38.2
Oeu014108.2 Olea europaea HOM05D001176 ORTHO05D007019 5.9e-69 265.8 718 34.4
CDE07G2068 Ceratophyllum demersum HOM05D004834 ORTHO05D006247 7.8e-69 265.4 462 40.5
QL12p003889 Quercus lobata HOM05D001176 ORTHO05D007019 4.3e-67 259.6 447 40.9
FvH4_2g37280 Fragaria vesca HOM05D001176 ORTHO05D007019 1.6e-66 257.7 556 37.6
Mapoly0009s0222 Marchantia polymorpha HOM05D001176 ORTHO05D007019 4.0e-65 253.1 686 31.8
PGSC0003DMG400001956 Solanum tuberosum HOM05D001176 ORTHO05D007019 1.7e-60 237.7 430 40.2
Pp3c2_23210 Physcomitrium patens HOM05D001176 ORTHO05D007019 2.3e-60 237.3 688 29.9
FAN15G1703 Fragaria x ananassa HOM05D001176 ORTHO05D007019 1.2e-56 224.9 334 44.6
MD13G1243800 Malus domestica HOM05D001176 ORTHO05D007019 2.0e-56 224.2 425 38.4
MD13G1244000 Malus domestica HOM05D001176 ORTHO05D007019 1.4e-54 218.0 340 43.5
Dinv41808 Davidia involucrata HOM05D001176 ORTHO05D007019 1.9e-54 217.6 258 52.7
MD13G1243900 Malus domestica HOM05D001176 ORTHO05D007019 1.1e-49 201.8 194 58.2
vmacro00085 Vaccinium macrocarpon HOM05D001176 ORTHO05D007019 7.6e-48 195.7 272 46.7
Hund16023 Selenicereus undatus HOM05D001176 ORTHO05D007019 9.9e-48 195.3 203 57.6
SMO339G0033 Selaginella moellendorffii HOM05D001176 ORTHO05D007019 8.4e-47 192.2 666 27.8
AagrBONN_evm.TU.Sc2ySwM_362.2951 Anthoceros agrestis HOM05D001176 ORTHO05D007019 2.8e-42 177.2 611 26.8
FAN15G2248 Fragaria x ananassa HOM05D001176 ORTHO05D007019 1.4e-41 174.9 169 59.2
Dinv41809 Davidia involucrata HOM05D001176 ORTHO05D007019 8.4e-39 165.6 265 43.4
arahy.Tifrunner.gnm1.ann1.7XHH75 Arachis hypogaea HOM05D001176 ORTHO05D007019 1.3e-28 131.7 133 58.6
arahy.Tifrunner.gnm1.ann1.V0K3WG Arachis hypogaea HOM05D001176 ORTHO05D007019 1.3e-28 131.7 133 58.6
PRCOL_00001869 Prasinoderma coloniale HOM05D001176 ORTHO05D007019 1.3e-28 131.7 251 36.7
Glyma.01G154450 Glycine max HOM05D001176 ORTHO05D007019 2.1e-26 124.4 136 56.6
MCO03G158 Micromonas commoda HOM05D001176 ORTHO05D007019 9.0e-25 119.0 254 33.9
CBR_g61501 Chara braunii HOM05D001176 ORTHO05D007019 6.7e-20 102.8 184 37.0
CBR_g61503 Chara braunii HOM05D001176 ORTHO05D007019 4.9e-15 86.7 289 30.4
Cc07_g20650 Coffea canephora HOM05D001176 ORTHO05D007019 6.5e-15 86.3 184 36.4
Glyma.01G154551 Glycine max HOM05D001176 ORTHO05D214389 5.5e-14 83.2 73 65.8
TPR.G11479 Trifolium pratense HOM05D001176 ORTHO05D007019 1.6e-13 81.6 63 69.8
Cre13.g587750 Chlamydomonas reinhardtii HOM05D001176 ORTHO05D007019 2.7e-13 80.9 243 30.5
CSS0030107 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 7.6e-08 62.8 188 31.4
CsaV3_4G027980 Cucumis sativus L. HOM05D001176 ORTHO05D007019 8.4e-07 59.3 153 34.6


User provided reference genes

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