Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 7.8e-192 673.7 357 100.0
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 6.2e-189 664.1 357 97.2
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 3.0e-127 459.1 364 70.1
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 5.9e-123 444.9 366 68.3
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 2.6e-110 402.9 385 62.3
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 8.2e-109 397.9 357 61.9
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 3.5e-107 392.5 362 60.8
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 4.2e-105 385.6 361 60.9
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 2.1e-104 383.3 361 60.9
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 2.3e-103 379.8 360 60.0
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 3.0e-103 379.4 257 74.3
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 2.0e-102 376.7 257 73.2
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 7.5e-102 374.8 359 58.5
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 1.1e-100 370.9 363 61.2
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 1.2e-99 367.5 362 58.8
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.2e-99 367.5 369 57.2
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 1.6e-99 367.1 368 58.2
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 2.7e-99 366.3 358 59.8
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 2.7e-99 366.3 362 58.0
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 6.5e-98 361.7 362 56.9
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 1.5e-97 360.5 358 58.7
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 1.9e-97 360.1 364 57.4
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 5.5e-97 358.6 360 57.5
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 1.2e-96 357.5 364 57.4
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 1.6e-96 357.1 343 57.1
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 1.6e-96 357.1 359 56.8
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 4.7e-96 355.5 370 55.4
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 6.1e-96 355.1 369 56.1
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 6.1e-96 355.1 365 58.1
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 1.8e-95 353.6 344 57.3
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.8e-95 353.6 313 60.1
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 5.2e-95 352.1 368 58.2
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 8.8e-95 351.3 362 54.1
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 1.5e-94 350.5 357 54.6
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 2.6e-94 349.7 320 58.8
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 3.4e-94 349.4 362 55.2
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 3.4e-94 349.4 363 55.1
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 3.4e-94 349.4 363 55.1
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 3.4e-94 349.4 361 54.8
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 5.7e-94 348.6 357 56.9
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 7.5e-94 348.2 362 55.2
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 9.8e-94 347.8 328 58.8
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 9.8e-94 347.8 266 65.0
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.2e-93 346.7 356 56.5
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 3.7e-93 345.9 351 56.1
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 8.3e-93 344.7 366 56.0
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 9.1e-92 341.3 369 53.4
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 1.2e-91 340.9 361 55.4
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 3.5e-91 339.3 359 54.6
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 5.9e-91 338.6 359 53.5
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 5.9e-91 338.6 363 55.4
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 1.0e-90 337.8 257 65.8
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 1.0e-90 337.8 409 51.3
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 1.7e-90 337.0 369 53.1
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 1.9e-89 333.6 332 55.1
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 3.2e-89 332.8 341 54.0
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 3.2e-89 332.8 358 53.4
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 5.5e-89 332.0 331 55.3
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 9.5e-89 331.3 345 54.2
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 9.5e-89 331.3 305 59.3
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 2.1e-88 330.1 285 60.4
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 8.0e-88 328.2 285 60.7
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 1.4e-87 327.4 348 54.0
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 1.4e-87 327.4 366 52.7
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 1.8e-87 327.0 364 53.6
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 1.8e-87 327.0 285 59.6
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 3.0e-87 326.2 356 52.8
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 8.8e-87 324.7 334 54.8
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 8.8e-87 324.7 364 52.5
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 8.8e-87 324.7 346 53.5
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 1.2e-86 324.3 285 58.9
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 1.2e-86 324.3 292 59.9
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 1.2e-86 324.3 338 54.4
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 4.4e-86 322.4 331 55.6
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 7.5e-86 321.6 361 51.0
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 7.5e-86 321.6 364 53.0
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 1.3e-85 320.9 360 51.7
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 1.3e-85 320.9 264 62.5
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 6.3e-85 318.5 340 53.2
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 1.8e-84 317.0 347 51.0
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 4.1e-84 315.8 363 53.4
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.2e-83 314.3 364 51.9
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 1.6e-83 313.9 358 51.1
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 2.0e-83 313.5 321 54.5
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 1.0e-82 311.2 337 52.8
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 1.3e-82 310.8 278 58.6
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 1.7e-82 310.5 345 51.9
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 1.7e-82 310.5 328 53.4
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 3.8e-82 309.3 322 54.3
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 6.6e-82 308.5 347 50.1
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 8.6e-82 308.1 233 68.7
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 1.9e-81 307.0 366 51.4
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 4.3e-81 305.8 329 52.6
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 1.2e-80 304.3 236 65.7
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 2.1e-80 303.5 269 59.1
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 6.1e-80 302.0 363 49.9
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 1.8e-79 300.4 300 61.3
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 6.8e-79 298.5 334 51.8
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 3.4e-78 296.2 331 52.9
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 9.8e-78 294.7 266 57.5
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 3.7e-77 292.7 277 55.2
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 2.4e-76 290.0 209 67.5
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 1.7e-69 267.3 266 54.1
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 1.9e-60 237.3 231 54.5
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 1.8e-47 194.1 233 50.6
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 7.1e-44 182.2 162 59.3
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 3.7e-32 143.3 137 54.7
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.6e-24 117.9 317 31.2
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.5e-17 94.7 196 34.7
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 5.7e-17 92.8 297 27.6
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 2.2e-16 90.9 77 62.3
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 4.8e-08 63.2 93 45.2
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 3.4e-06 57.0 130 40.8
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 5.9e-06 56.2 61 55.7


User provided reference genes

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