Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012060 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 6.5e-111 404.1 201 100.0
Dinv37207 Davidia involucrata HOM05D004429 ORTHO05D005583 1.5e-88 329.7 198 83.8
Hma1.2p1_0350F.1_g132400 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 5.3e-81 304.7 201 79.6
Hma1.2p1_1065F.1_g253770 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 5.3e-81 304.7 201 79.6
CSS0043629 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 8.5e-79 297.4 210 76.2
CiPaw.10G142900 Carya illinoinensis HOM05D004429 ORTHO05D005583 4.4e-75 285.0 201 71.1
Prupe.6G250000 Prunus persica HOM05D004429 ORTHO05D005583 1.8e-73 279.6 202 69.8
GSVIVG01025623001 Vitis vinifera HOM05D004429 ORTHO05D005583 9.1e-73 277.3 205 71.2
Lj2C100T9 Lonicera japonica HOM05D004429 ORTHO05D005583 2.0e-72 276.2 207 72.0
Duzib106G0640 Durio zibethinus HOM05D004429 ORTHO05D005583 3.5e-72 275.4 206 70.9
Thecc.05G044800 Theobroma cacao HOM05D004429 ORTHO05D005583 6.5e-71 271.2 202 69.8
TWI53G0393 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 5.5e-70 268.1 204 68.6
Gohir.D11G344900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 9.4e-70 267.3 200 69.5
Gorai.007G375300 Gossypium raimondii HOM05D004429 ORTHO05D005583 9.4e-70 267.3 200 69.5
QL05p010485 Quercus lobata HOM05D004429 ORTHO05D005583 9.4e-70 267.3 209 67.5
COL.COLO4_14858 Corchorus olitorius HOM05D004429 ORTHO05D005583 1.2e-69 266.9 212 67.5
QL07p047160 Quercus lobata HOM05D004429 ORTHO05D005583 1.2e-69 266.9 211 66.8
Gohir.A11G326000 Gossypium hirsutum HOM05D004429 ORTHO05D005583 4.7e-69 265.0 200 69.0
DCAR_014836 Daucus carota HOM05D004429 ORTHO05D005583 8.0e-69 264.2 205 69.3
FvH4_6g14340 Fragaria vesca HOM05D004429 ORTHO05D005583 1.0e-68 263.8 204 67.2
FAN14G5191 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.0e-68 263.8 204 67.2
Gohir.A09G158500 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.4e-68 263.5 203 67.5
MD12G1138000 Malus domestica HOM05D004429 ORTHO05D005583 1.8e-68 263.1 203 67.5
Manes.12G146400 Manihot esculenta HOM05D004429 ORTHO05D005583 1.8e-68 263.1 199 67.3
Oeu060052.2 Olea europaea HOM05D004429 ORTHO05D005583 1.8e-68 263.1 212 65.6
Duzib128G1460 Durio zibethinus HOM05D004429 ORTHO05D005583 3.0e-68 262.3 207 68.6
Cc06_g03000 Coffea canephora HOM05D004429 ORTHO05D005583 4.0e-68 261.9 215 67.9
Gohir.D09G153900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 4.0e-68 261.9 203 67.0
FAN02G4491 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.5e-67 260.0 204 68.1
Gorai.006G175400 Gossypium raimondii HOM05D004429 ORTHO05D005583 1.5e-67 260.0 202 67.3
TWI74G1196 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 1.5e-67 260.0 211 65.4
FAN09G1286 Fragaria x ananassa HOM05D004429 ORTHO05D005583 2.0e-67 259.6 203 68.0
ClCG10G020910 Citrullus lanatus HOM05D004429 ORTHO05D005583 3.4e-67 258.8 209 65.6
Aa31LG5G22900 Aethionema arabicum HOM05D004429 ORTHO05D005583 2.8e-66 255.8 204 64.7
MD04G1120700 Malus domestica HOM05D004429 ORTHO05D005583 2.8e-66 255.8 208 64.9
Ciclev10013673m.g Citrus clementina HOM05D004429 ORTHO05D005583 3.7e-66 255.4 208 66.3
PGR004G1112 Punica granatum HOM05D004429 ORTHO05D005583 8.3e-66 254.2 216 63.9
RcHm_v2.0_Chr3g0467391 Rosa chinensis HOM05D004429 ORTHO05D005583 2.4e-65 252.7 206 65.0
Oeu024364.1 Olea europaea HOM05D004429 ORTHO05D005583 2.7e-64 249.2 214 62.6
SalBow3G1038 Salvia bowleyana HOM05D004429 ORTHO05D005583 2.7e-64 249.2 211 63.0
Thhalv10010743m.g Eutrema salsugineum HOM05D004429 ORTHO05D005583 3.5e-64 248.8 199 64.8
Potri.006G082400 Populus trichocarpa HOM05D004429 ORTHO05D005583 3.5e-64 248.8 206 65.5
THA.LOC104823424 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 3.5e-64 248.8 201 63.2
Sopen10g034060 Solanum pennellii HOM05D004429 ORTHO05D005583 1.0e-63 247.3 212 64.6
Sp5g08720 Schrenkiella parvula HOM05D004429 ORTHO05D005583 1.3e-63 246.9 199 65.3
FAN05G1703 Fragaria x ananassa HOM05D004429 ORTHO05D005583 2.3e-63 246.1 191 68.6
CARHR163560 Cardamine hirsuta HOM05D004429 ORTHO05D005583 2.9e-63 245.7 199 64.3
CsaV3_3G035100 Cucumis sativus L. HOM05D004429 ORTHO05D005583 3.8e-63 245.4 214 60.3
Solyc10g084620.3 Solanum lycopersicum HOM05D004429 ORTHO05D005583 3.8e-63 245.4 210 65.2
Sed0001771 Sechium edule HOM05D004429 ORTHO05D005583 6.6e-63 244.6 219 61.6
MELO3C009280.2 Cucumis melo HOM05D004429 ORTHO05D005583 8.6e-63 244.2 211 61.1
TAR369G0217 Trochodendron aralioides HOM05D004429 ORTHO05D005583 1.1e-62 243.8 201 66.2
THA.LOC104806580 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 1.9e-62 243.0 205 62.9
PSO339G1692 Papaver somniferum HOM05D004429 ORTHO05D005583 4.2e-62 241.9 215 62.3
AL5G34580 Arabidopsis lyrata HOM05D004429 ORTHO05D005583 5.5e-62 241.5 200 64.5
AT3G53630 Arabidopsis thaliana HOM05D004429 ORTHO05D005583 9.5e-62 240.7 200 64.5
Nn2g12909 Nelumbo nucifera HOM05D004429 ORTHO05D005583 1.2e-61 240.4 202 62.9
PSO648G0090 Papaver somniferum HOM05D004429 ORTHO05D005583 1.2e-61 240.4 215 61.9
Lsat_1_v5_gn_6_32421 Lactuca sativa HOM05D004429 ORTHO05D005583 1.6e-61 240.0 215 63.7
BraA09t40127Z Brassica rapa HOM05D004429 ORTHO05D005583 3.6e-61 238.8 200 62.5
CAN.G97.23 Capsicum annuum HOM05D004429 ORTHO05D005583 4.7e-61 238.4 208 63.0
AUR62013875 Chenopodium quinoa HOM05D004429 ORTHO05D005583 4.7e-61 238.4 212 61.3
Sabra06G0062200 Salix brachista HOM05D004429 ORTHO05D005583 4.7e-61 238.4 195 64.1
HanXRQChr14g0459271 Helianthus annuus HOM05D004429 ORTHO05D005583 8.0e-61 237.7 210 63.3
PGSC0003DMG400008931 Solanum tuberosum HOM05D004429 ORTHO05D005583 1.4e-60 236.9 218 60.6
SGA_v2.0_scaffold126G33824 Striga asiatica HOM05D004429 ORTHO05D005583 1.8e-60 236.5 219 58.9
Carub.0005s2021 Capsella rubella HOM05D004429 ORTHO05D005583 3.0e-60 235.7 201 63.7
Migut.J00365 Erythranthe guttata HOM05D004429 ORTHO05D005583 3.0e-60 235.7 228 57.5
Nitab4.5_0000216g0050 Nicotiana tabacum HOM05D004429 ORTHO05D005583 3.0e-60 235.7 199 65.3
BcaB02g08517 Brassica carinata HOM05D004429 ORTHO05D005583 5.2e-60 235.0 199 61.8
Lsat_1_v5_gn_2_110581 Lactuca sativa HOM05D004429 ORTHO05D005583 6.8e-60 234.6 210 62.4
Peaxi162Scf00604g00415 Petunia axillaris HOM05D004429 ORTHO05D005583 6.8e-60 234.6 214 60.3
Sed0027367 Sechium edule HOM05D004429 ORTHO05D005583 1.2e-59 233.8 201 62.2
Solyc09g010390.2 Solanum lycopersicum HOM05D004429 ORTHO05D005583 3.4e-59 232.3 222 59.0
BolC8t50499H Brassica oleracea HOM05D004429 ORTHO05D005583 5.7e-59 231.5 198 62.6
Nn2g10451 Nelumbo nucifera HOM05D004429 ORTHO05D005583 5.7e-59 231.5 215 59.5
Sc20g0004500 Simmondsia chinensis HOM05D004429 ORTHO05D005583 5.7e-59 231.5 206 59.2
MBI14_g36720_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 7.5e-59 231.1 208 61.1
BraA04t16299Z Brassica rapa HOM05D001071 ORTHO05D005583 9.8e-59 230.7 207 61.4
A09p46640 Brassica napus HOM05D004429 ORTHO05D005583 1.7e-58 229.9 200 62.0
C04p38880 Brassica napus HOM05D001071 ORTHO05D005583 1.7e-58 229.9 204 61.3
Eucgr.K03161 Eucalyptus grandis HOM05D004429 ORTHO05D005583 2.8e-58 229.2 223 56.1
MSTRG.5688 Avicennia marina HOM05D004429 ORTHO05D005583 3.7e-58 228.8 210 58.6
Aa31LG10G9470 Aethionema arabicum HOM05D004429 ORTHO05D005583 4.9e-58 228.4 192 62.0
A04p05960 Brassica napus HOM05D004429 ORTHO05D005583 4.9e-58 228.4 203 61.6
CiPaw.09G188700 Carya illinoinensis HOM05D004429 ORTHO05D005583 1.4e-57 226.9 203 58.1
BcaC07g39724 Brassica carinata HOM05D004429 ORTHO05D005583 3.1e-57 225.7 200 60.5
MSTRG.19104 Avicennia marina HOM05D004429 ORTHO05D005583 4.1e-57 225.3 202 61.4
BcaC02g09143 Brassica carinata HOM05D004429 ORTHO05D005583 4.1e-57 225.3 203 61.1
BolC4t25460H Brassica oleracea HOM05D004429 ORTHO05D005583 4.1e-57 225.3 203 61.1
CAN.G688.9 Capsicum annuum HOM05D004429 ORTHO05D005583 4.1e-57 225.3 215 56.7
BcaB01g00258 Brassica carinata HOM05D004429 ORTHO05D005583 9.2e-57 224.2 200 59.5
EL10Ac1g02077 Beta vulgaris HOM05D004429 ORTHO05D005583 1.2e-56 223.8 208 58.7
C08p28960 Brassica napus HOM05D004429 ORTHO05D005583 1.2e-56 223.8 198 60.6
Ah.01g015860 Amaranthus hybridus HOM05D004429 ORTHO05D005583 7.8e-56 221.1 217 56.2
Sopen09g005130 Solanum pennellii HOM05D004429 ORTHO05D005583 2.9e-55 219.2 241 54.4
ATR0222G016 Amborella trichopoda HOM05D004429 ORTHO05D005583 6.6e-55 218.0 202 58.4
Nitab4.5_0000202g0130 Nicotiana tabacum HOM05D004429 ORTHO05D005583 8.6e-55 217.6 183 65.0
Lalb_Chr20g0113181 Lupinus albus HOM05D004429 ORTHO05D005583 2.5e-54 216.1 217 53.5
Nitab4.5_0012047g0010 Nicotiana tabacum HOM05D004429 ORTHO05D005583 2.5e-54 216.1 198 60.1
Aqoxy2G02012 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 5.6e-54 214.9 215 56.3
ECA233G0195 Erigeron canadensis HOM05D004429 ORTHO05D005583 2.1e-53 213.0 208 60.1
PGSC0003DMG400010996 Solanum tuberosum HOM05D004429 ORTHO05D005583 2.8e-53 212.6 161 67.7
AUR62036719 Chenopodium quinoa HOM05D004429 ORTHO05D005583 5.2e-52 208.4 208 56.2
Nitab4.5_0002077g0140 Nicotiana tabacum HOM05D004429 ORTHO05D005583 4.4e-51 205.3 160 66.2
Glyma.19G173500 Glycine max HOM05D004429 ORTHO05D005583 1.9e-49 199.9 210 54.8
SHI12608 Sapria himalayana HOM05D004429 ORTHO05D000003 3.2e-49 199.1 207 51.7
arahy.Tifrunner.gnm1.ann1.2JSS8R Arachis hypogaea HOM05D004429 ORTHO05D005583 5.4e-49 198.4 227 49.3
CDE04G3062 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 6.0e-48 194.9 197 55.8
Phvul.001G170200 Phaseolus vulgaris HOM05D004429 ORTHO05D005583 3.9e-47 192.2 207 51.7
Atru.chr8.1930 Acer truncatum HOM05D004429 ORTHO05D005583 5.0e-47 191.8 153 67.3
Glyma.03G172600 Glycine max HOM05D004429 ORTHO05D005583 2.5e-46 189.5 217 51.2
unitig_578.g15706 Utricularia gibba HOM05D004429 ORTHO05D005583 1.8e-44 183.3 204 49.5
Migut.L01619 Erythranthe guttata HOM05D004429 ORTHO05D005583 5.8e-43 178.3 180 56.1
VMungo1383G1968 Vigna mungo HOM05D004429 ORTHO05D005583 2.9e-42 176.0 188 52.1
COL.COLO4_24433 Corchorus olitorius HOM05D004429 ORTHO05D005583 9.2e-41 171.0 130 66.9
ATR0222G031 Amborella trichopoda HOM05D004429 ORTHO05D005583 1.7e-39 166.8 178 53.4
Rhsim05G0188000 Rhododendron simsii HOM05D004429 ORTHO05D005583 1.7e-39 166.8 141 64.5
Lj1g0006432 Lotus japonicus HOM05D004429 ORTHO05D005583 1.9e-38 163.3 218 44.0
QL01p033097 Quercus lobata HOM05D004429 ORTHO05D005583 3.6e-37 159.1 200 44.5
SGA_v2.0_scaffold87G27174 Striga asiatica HOM05D004429 ORTHO05D005583 1.1e-36 157.5 144 58.3
unitig_26.g9203 Utricularia gibba HOM05D004429 ORTHO05D005583 6.8e-36 154.8 174 51.1
HPP92_001685 Vanilla planifolia HOM05D004429 ORTHO05D005583 3.4e-35 152.5 213 44.1
Atru.chr7.899 Acer truncatum HOM05D004429 ORTHO05D005583 1.7e-34 150.2 116 62.9
Medtr7g099970 Medicago truncatula HOM05D004429 ORTHO05D005583 4.9e-34 148.7 215 40.9
SEGI_33598 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 4.9e-34 148.7 208 44.2
Zm00001eb012690 Zea mays HOM05D004429 ORTHO05D005583 8.3e-34 147.9 213 42.7
DCAR_017884 Daucus carota HOM05D004429 ORTHO05D005583 3.2e-33 146.0 203 44.3
Os03g0279600 Oryza sativa ssp. japonica HOM05D004429 ORTHO05D005583 7.1e-33 144.8 213 41.3
TPR.G11987 Trifolium pratense HOM05D004429 ORTHO05D005583 9.2e-33 144.4 199 43.2
Ca_08790_v3 Cicer arietinum L. HOM05D004429 ORTHO05D005583 7.8e-32 141.4 198 40.9
Actinidia05294 Actinidia chinensis HOM05D004429 ORTHO05D005583 1.3e-31 140.6 100 68.0
Aqoxy3G04288 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 1.3e-31 140.6 121 55.4
Haze_24041 Corylus avellana HOM05D004429 ORTHO05D005583 4.3e-30 135.6 172 39.5
SEGI_08514 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 5.6e-30 135.2 199 40.7
MBI18_g47300_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 1.2e-27 127.5 122 59.8
Ciclev10029396m.g Citrus clementina HOM05D004429 ORTHO05D005583 9.9e-27 124.4 154 42.9
MBI06_g43519_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 9.9e-27 124.4 122 59.0
CDE07G1713 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 8.4e-26 121.3 190 40.5
CBR_g20121 Chara braunii HOM05D004429 ORTHO05D005583 7.1e-25 118.2 101 49.5
Atru.chr3.3828 Acer truncatum HOM05D004429 ORTHO05D005583 2.1e-24 116.7 155 41.3
Psat3g048680 Pisum sativum HOM05D004429 ORTHO05D005583 3.3e-22 109.4 206 35.0
SEGI_24259 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 7.3e-22 108.2 133 45.1
Mapoly0066s0057 Marchantia polymorpha HOM05D004429 ORTHO05D005583 4.0e-20 102.4 83 50.6
Sopen04g022580 Solanum pennellii HOM05D004429 ORTHO05D005583 4.0e-20 102.4 191 40.3
SMO348G0079 Selaginella moellendorffii HOM05D004429 ORTHO05D005583 2.0e-19 100.1 87 44.8
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 2.6e-19 99.8 112 56.2
EL10Ac5g11422 Beta vulgaris HOM05D004429 ORTHO05D005583 1.7e-18 97.1 115 53.9
Pp3c15_19860 Physcomitrium patens HOM05D004429 ORTHO05D005583 1.7e-18 97.1 134 38.1
SGA_v2.0_scaffold61G21134 Striga asiatica HOM05D004429 ORTHO05D005583 2.9e-18 96.3 167 43.1
Pp3c9_19700 Physcomitrium patens HOM05D004429 ORTHO05D005583 6.4e-18 95.1 134 38.1
SGA_v2.0_scaffold32G13323 Striga asiatica HOM05D004429 ORTHO05D005583 1.9e-17 93.6 98 57.1
TPR.G8932 Trifolium pratense HOM05D004429 ORTHO05D005583 9.3e-17 91.3 98 49.0
Pp3c4_10520 Physcomitrium patens HOM05D004429 ORTHO05D005583 2.7e-16 89.7 84 46.4
TPR.G14114 Trifolium pratense HOM05D004429 ORTHO05D005583 1.1e-12 77.8 111 39.6
C06p21580 Brassica napus HOM05D004429 ORTHO05D021447 6.4e-10 68.6 70 52.9
BolC6t37347H Brassica oleracea HOM05D004429 ORTHO05D021447 2.4e-09 66.6 68 52.9
Ah.00g000610 Amaranthus hybridus HOM05D004429 ORTHO05D005583 7.1e-09 65.1 76 50.0
CiPaw.05G236000 Carya illinoinensis HOM05D004429 ORTHO05D005583 7.9e-08 61.6 75 53.3


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