Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012058 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 1.3e-160 569.7 292 100.0
CSS0038357 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 2.2e-123 446.0 302 75.8
CSS0045650 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 2.6e-92 342.8 310 60.3
CSS0011870 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 7.7e-81 304.7 288 59.4
CSS0022880 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 5.0e-80 302.0 220 76.4
CSS0002549 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 2.4e-74 283.1 220 72.3
CSS0029770 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 1.7e-59 233.8 183 72.7
CSS0024381 Camellia sinensis var. sinensis HOM05D000734 ORTHO05D002223 1.4e-29 134.4 90 72.2
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 2.9e-19 100.1 233 34.3
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 1.1e-18 98.2 235 32.8
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 1.1e-18 98.2 235 32.8
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 1.1e-18 98.2 235 32.8
Rhsim05G0128200 Rhododendron simsii HOM05D001436 ORTHO05D000880 1.8e-16 90.9 89 49.4
CSS0031951 Camellia sinensis var. sinensis HOM05D000517 ORTHO05D000751 3.9e-16 89.7 106 51.9
Lj6P789T46 Lonicera japonica HOM05D001436 ORTHO05D000880 3.1e-13 80.1 95 43.2
Oeu033492.1 Olea europaea HOM05D000047 ORTHO05D008058 9.0e-13 78.6 79 44.3
COL.COLO4_08698 Corchorus olitorius HOM05D001436 ORTHO05D000880 3.4e-12 76.6 67 53.7
QL08p033351 Quercus lobata HOM05D001934 ORTHO05D002139 1.3e-11 74.7 101 36.6
COL.COLO4_19353 Corchorus olitorius HOM05D000013 ORTHO05D000011 2.9e-11 73.6 67 50.7
MBI07_g32587_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 6.5e-11 72.4 67 47.8
MBI15_g19418_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 6.5e-11 72.4 99 36.4
Oeu014370.1 Olea europaea HOM05D000429 ORTHO05D000352 6.5e-11 72.4 64 50.0
MBI05_g32032_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 4.2e-10 69.7 97 36.1
Oeu014351.1 Olea europaea HOM05D000047 ORTHO05D000044 5.5e-10 69.3 78 41.0
Oeu018352.1 Olea europaea HOM05D003069 ORTHO05D000880 7.2e-10 68.9 63 47.6
Oeu003844.1 Olea europaea HOM05D001436 ORTHO05D000880 1.2e-09 68.2 63 49.2
MBI08_g16117_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.6e-09 67.8 118 28.0
Manes.18G056202 Manihot esculenta HOM05D000429 ORTHO05D000880 1.6e-09 67.8 92 37.0
TPR.G30696 Trifolium pratense HOM05D000429 ORTHO05D000880 1.6e-09 67.8 62 50.0
MBI15_g02577_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.1e-09 67.4 96 35.4
Oeu022312.1 Olea europaea HOM05D000047 ORTHO05D000044 3.6e-09 66.6 79 39.2
Oeu059272.1 Olea europaea HOM05D011569 ORTHO05D000880 7.9e-09 65.5 89 37.1
Oeu057826.1 Olea europaea HOM05D000047 ORTHO05D000044 1.0e-08 65.1 79 38.0
MBI01_g48011_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.3e-08 64.7 67 46.3
MBI11_g41301_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.3e-08 64.7 72 44.4
MBI16_g25487_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.3e-08 64.7 66 39.4
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 2.3e-08 63.9 64 46.9
CSS0038364 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 2.3e-08 63.9 60 46.7
MBI18_g41471_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.3e-08 63.9 66 40.9
Manes.14G150022 Manihot esculenta HOM05D000429 ORTHO05D000880 2.3e-08 63.9 65 41.5
MBI01_g07127_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.0e-08 63.5 63 47.6
MBI01_g37950_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.0e-08 63.5 63 47.6
TWI38G1939 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.9e-08 63.2 65 44.6
Manes.02G203175 Manihot esculenta HOM05D000429 ORTHO05D000352 5.1e-08 62.8 92 34.8
CSS0001426 Camellia sinensis var. sinensis HOM05D000877 ORTHO05D001509 6.7e-08 62.4 60 45.0
CSS0019617 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 6.7e-08 62.4 60 46.7
CSS0021006 Camellia sinensis var. sinensis HOM05D000517 ORTHO05D000751 6.7e-08 62.4 79 50.6
AUR62034883 Chenopodium quinoa HOM05D009849 ORTHO05D012324 6.7e-08 62.4 78 39.7
MBI18_g31595_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 6.7e-08 62.4 67 44.8
Manes.14G158232 Manihot esculenta HOM05D000429 ORTHO05D000880 6.7e-08 62.4 72 38.9
QL10p047797 Quercus lobata HOM05D000047 ORTHO05D000044 8.7e-08 62.0 63 39.7
SGA_v2.0_scaffold245G44675 Striga asiatica HOM05D000429 ORTHO05D002449 8.7e-08 62.0 63 42.9
MBI09_g38225_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.5e-07 61.2 92 35.9
MBI10_g32341_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.5e-07 61.2 67 44.8
MBI16_g09914_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.5e-07 61.2 66 40.9
Ah.04g156040 Amaranthus hybridus HOM05D009849 ORTHO05D000880 1.9e-07 60.8 64 40.6
CSS0016049 Camellia sinensis var. sinensis HOM05D009643 ORTHO05D010737 2.5e-07 60.5 57 47.4
Oeu015972.1 Olea europaea HOM05D001436 ORTHO05D000880 2.5e-07 60.5 62 45.2
arahy.Tifrunner.gnm1.ann1.6D2RJL Arachis hypogaea HOM05D000429 ORTHO05D000880 3.3e-07 60.1 62 43.5
MBI14_g08687_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.3e-07 60.1 63 39.7
Manes.18G025086 Manihot esculenta HOM05D000429 ORTHO05D000880 3.3e-07 60.1 53 49.1
MBI05_g19538_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 4.3e-07 59.7 62 41.9
MBI14_g26991_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 4.3e-07 59.7 99 34.3
MBI18_g39969_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 4.3e-07 59.7 94 31.9
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 5.7e-07 59.3 52 51.9
MBI09_g02045_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 5.7e-07 59.3 66 42.4
MBI18_g11469_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 5.7e-07 59.3 93 34.4
PSO210G3944 Papaver somniferum HOM05D009926 ORTHO05D002449 5.7e-07 59.3 64 45.3
PSO339G6488 Papaver somniferum HOM05D000429 ORTHO05D002449 5.7e-07 59.3 68 42.6
TWI14G0438 Tripterygium wilfordii HOM05D000429 ORTHO05D002449 5.7e-07 59.3 65 41.5
MBI07_g36530_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 7.4e-07 58.9 66 40.9
MBI08_g23489_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 7.4e-07 58.9 68 39.7
MBI16_g26216_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 7.4e-07 58.9 64 45.3
Cfa005197 Carpinus fangiana HOM05D001375 ORTHO05D001222 9.7e-07 58.5 88 35.2
PSO675G1134 Papaver somniferum HOM05D009926 ORTHO05D002449 9.7e-07 58.5 66 40.9
TWI18G0208 Tripterygium wilfordii HOM05D000429 ORTHO05D002449 9.7e-07 58.5 65 41.5
MBI14_g31656_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.3e-06 58.2 66 39.4
ECA236G0851 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.6e-06 57.8 102 36.3
PSO017G0308 Papaver somniferum HOM05D000429 ORTHO05D000352 1.6e-06 57.8 89 32.6
PSO339G2537 Papaver somniferum HOM05D000429 ORTHO05D000352 1.6e-06 57.8 103 35.0
PSO478G1612 Papaver somniferum HOM05D000429 ORTHO05D000352 1.6e-06 57.8 66 40.9
PSO675G8090 Papaver somniferum HOM05D000429 ORTHO05D002449 1.6e-06 57.8 90 32.2
TWI39G0468 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.6e-06 57.8 93 35.5
arahy.Tifrunner.gnm1.ann1.2GNH2V Arachis hypogaea HOM05D000429 ORTHO05D000880 2.2e-06 57.4 52 50.0
BraA05t21181Z Brassica rapa HOM05D000429 ORTHO05D000880 2.2e-06 57.4 92 34.8
Haze_05880 Corylus avellana HOM05D043714 ORTHO05D000880 2.2e-06 57.4 230 26.5
MBI15_g11945_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.2e-06 57.4 66 34.8
PSO478G3088 Papaver somniferum HOM05D000429 ORTHO05D002449 2.2e-06 57.4 72 41.7
TWI75G0872 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.2e-06 57.4 76 34.2
ECA236G1469 Erigeron canadensis HOM05D003069 ORTHO05D002578 2.8e-06 57.0 84 41.7
ECA238G4817 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.8e-06 57.0 65 44.6
MBI17_g25611_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.8e-06 57.0 66 36.4
MBI19_g10569_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.8e-06 57.0 66 39.4
PSO591G0437 Papaver somniferum HOM05D000429 ORTHO05D002449 2.8e-06 57.0 90 33.3
ECA240G1667 Erigeron canadensis HOM05D003069 ORTHO05D002578 3.7e-06 56.6 107 35.5
MBI18_g34712_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.7e-06 56.6 59 49.2
MBI19_g06297_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.7e-06 56.6 66 36.4
PSO210G5622 Papaver somniferum HOM05D000429 ORTHO05D002449 3.7e-06 56.6 90 33.3
PSO675G5458 Papaver somniferum HOM05D000429 ORTHO05D002449 3.7e-06 56.6 90 32.2
VMungo0720G1635 Vigna mungo HOM05D008322 ORTHO05D000880 3.7e-06 56.6 62 41.9
CSS0009224 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 4.8e-06 56.2 60 41.7
COL.COLO4_08788 Corchorus olitorius HOM05D013576 ORTHO05D000880 4.8e-06 56.2 64 40.6
MBI19_g39986_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 4.8e-06 56.2 58 41.4
PSO384G1833 Papaver somniferum HOM05D000429 ORTHO05D002449 4.8e-06 56.2 90 32.2
PSO541G3456 Papaver somniferum HOM05D009926 ORTHO05D002449 4.8e-06 56.2 115 29.6
PSO731G0037 Papaver somniferum HOM05D009926 ORTHO05D002449 4.8e-06 56.2 68 42.6
BolC9t56771H Brassica oleracea HOM05D000429 ORTHO05D000880 6.3e-06 55.8 92 35.9
CSS0033267 Camellia sinensis var. sinensis HOM05D009643 ORTHO05D010737 6.3e-06 55.8 57 43.9
MBI12_g41553_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 6.3e-06 55.8 66 39.4
TWI59G0411 Tripterygium wilfordii HOM05D000429 ORTHO05D002449 6.3e-06 55.8 61 41.0
VMungo0540G1972 Vigna mungo HOM05D008322 ORTHO05D000880 6.3e-06 55.8 78 35.9
ECA232G1485 Erigeron canadensis HOM05D000047 ORTHO05D002578 8.2e-06 55.5 65 43.1
ECA233G1035 Erigeron canadensis HOM05D003069 ORTHO05D002578 8.2e-06 55.5 66 45.5
ECA236G1512 Erigeron canadensis HOM05D003069 ORTHO05D002578 8.2e-06 55.5 66 45.5
MBI05_g29973_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 8.2e-06 55.5 55 47.3
PSO017G0797 Papaver somniferum HOM05D000429 ORTHO05D002449 8.2e-06 55.5 89 32.6
PSO339G4187 Papaver somniferum HOM05D017084 ORTHO05D002449 8.2e-06 55.5 101 34.7
TWI34G1687 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.2e-06 55.5 93 35.5
TWI36G0153 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.2e-06 55.5 93 35.5
VMungo0251G0404 Vigna mungo HOM05D000619 ORTHO05D001806 8.2e-06 55.5 74 35.1
VMungo0251G0875 Vigna mungo HOM05D008322 ORTHO05D000880 8.2e-06 55.5 100 31.0
VMungo0251G1616 Vigna mungo HOM05D008322 ORTHO05D000880 8.2e-06 55.5 75 38.7


User provided reference genes

Program Settings