Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 0.0e+00 1139.4 574 100.0
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 7.9e-263 910.2 580 81.2
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 1.1e-248 863.2 551 79.5
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 1.3e-244 849.7 578 76.1
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 1.4e-230 803.1 563 73.4
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 3.9e-217 758.4 578 68.3
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 3.7e-212 741.9 562 66.5
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 3.2e-211 738.8 563 67.7
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 9.8e-205 717.2 562 65.5
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 2.9e-204 715.7 574 64.8
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 9.2e-203 710.7 573 63.7
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 1.3e-201 706.8 535 67.5
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 1.6e-194 683.3 557 62.5
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 1.6e-194 683.3 579 62.0
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 1.7e-193 679.9 564 61.9
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 3.0e-193 679.1 573 62.1
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 3.0e-193 679.1 557 62.1
QL05p065337 Quercus lobata HOM05D007837 ORTHO05D009965 9.6e-192 674.1 592 61.0
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 2.0e-189 666.4 564 61.0
FvH4_3g11620 Fragaria vesca HOM05D007837 ORTHO05D009965 3.4e-189 665.6 588 59.2
FAN21G3089 Fragaria x ananassa HOM05D007837 ORTHO05D009965 5.8e-189 664.8 580 59.5
TAR626G0822 Trochodendron aralioides HOM05D007837 ORTHO05D009965 9.9e-189 664.1 580 61.7
RcHm_v2.0_Chr5g0018641 Rosa chinensis HOM05D007837 ORTHO05D009965 5.4e-187 658.3 583 60.4
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 7.1e-187 657.9 565 61.8
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 2.1e-186 656.4 569 60.3
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 3.0e-185 652.5 568 58.8
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 3.0e-185 652.5 568 58.8
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 1.9e-184 649.8 425 75.1
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 5.6e-184 648.3 570 60.2
FAN25G3065 Fragaria x ananassa HOM05D007837 ORTHO05D009965 3.1e-182 642.5 572 59.4
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 2.6e-181 639.4 570 58.2
FAN16G2143 Fragaria x ananassa HOM05D007837 ORTHO05D009965 4.5e-181 638.6 598 57.2
MD05G1261900 Malus domestica HOM05D007837 ORTHO05D009965 6.4e-180 634.8 578 59.5
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 1.1e-179 634.0 578 59.5
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 2.3e-177 626.3 560 58.9
Cc09_g07320 Coffea canephora HOM05D007837 ORTHO05D009965 4.5e-173 612.1 441 69.2
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 7.6e-173 611.3 638 52.2
Nitab4.5_0011721g0030 Nicotiana tabacum HOM05D007837 ORTHO05D009965 3.0e-169 599.4 661 49.6
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 1.0e-164 584.3 577 54.6
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 2.2e-164 583.2 572 53.5
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 6.5e-164 581.6 626 51.4
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 5.5e-163 578.6 712 45.9
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 1.3e-159 567.4 549 55.6
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 9.0e-158 561.2 713 45.3
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 1.3e-156 557.4 563 55.6
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 3.9e-153 545.8 432 63.9
MBI18_g28215_MAGBIO Magnolia biondii HOM05D007837 ORTHO05D009965 9.4e-147 524.6 502 56.8
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 6.3e-143 511.9 503 54.7
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 1.6e-138 497.3 434 60.6
ATR1098G128 Amborella trichopoda HOM05D007837 ORTHO05D009965 1.5e-136 490.7 572 47.7
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 2.6e-136 490.0 440 59.5
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 5.3e-134 482.3 440 58.0
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 8.5e-132 474.9 499 50.7
Potri.001G443025 Populus trichocarpa HOM05D007837 ORTHO05D009965 1.8e-110 404.1 268 73.1
arahy.Tifrunner.gnm1.ann1.SA9RL2 Arachis hypogaea HOM05D007837 ORTHO05D009965 1.3e-108 397.9 420 51.9
Lsat_1_v5_gn_1_90680 Lactuca sativa HOM05D007837 ORTHO05D001664 1.5e-107 394.4 458 51.1
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 9.5e-107 391.7 350 57.4
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 3.0e-105 386.7 291 64.3
Medtr4g035250 Medicago truncatula HOM05D007837 ORTHO05D009965 8.9e-105 385.2 440 47.7
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 5.2e-97 359.4 545 39.1
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 8.9e-89 332.0 221 74.7
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 5.6e-75 286.2 526 35.0
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 5.6e-67 259.6 432 36.8
TPR.G1949 Trifolium pratense HOM05D007837 ORTHO05D009965 4.9e-63 246.5 187 64.2
TAR633G0058 Trochodendron aralioides HOM05D007837 ORTHO05D009965 8.4e-55 219.2 196 56.1
TPR.G10794 Trifolium pratense HOM05D007837 ORTHO05D009965 3.5e-45 187.2 191 51.8
Haze_05985 Corylus avellana HOM05D007837 ORTHO05D009965 2.3e-44 184.5 129 68.2
Hma1.2p1_0410F.1_g147010 Hydrangea macrophylla HOM05D007837 ORTHO05D009965 2.6e-40 171.0 104 78.8
Hma1.2p1_0410F.1_g147000 Hydrangea macrophylla HOM05D007837 ORTHO05D009965 1.7e-39 168.3 213 46.5
Sabra11G0145700 Salix brachista HOM05D007837 ORTHO05D009965 9.3e-38 162.5 115 67.0
Medtr4g035220 Medicago truncatula HOM05D007837 ORTHO05D009965 6.3e-34 149.8 120 60.8
GSVIVG01037970001 Vitis vinifera HOM05D007837 ORTHO05D009965 4.1e-33 147.1 100 73.0
Oeu008971.1 Olea europaea HOM05D007837 ORTHO05D009965 1.6e-29 135.2 106 65.1
Glyma.03G069100 Glycine max HOM05D007837 ORTHO05D009965 2.1e-29 134.8 175 46.3
Sabra11G0145800 Salix brachista HOM05D007837 ORTHO05D009965 4.4e-27 127.1 151 48.3
TAR086G0001 Trochodendron aralioides HOM05D007837 ORTHO05D009965 2.4e-25 121.3 62 90.3
MCO10G143 Micromonas commoda HOM05D007837 ORTHO05D009965 1.7e-18 98.6 428 25.2
TAR362G0005 Trochodendron aralioides HOM05D007837 ORTHO05D009965 1.7e-18 98.6 72 62.5
TAR365G1222 Trochodendron aralioides HOM05D001154 ORTHO05D010892 1.7e-18 98.6 67 68.7
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.7e-18 97.4 234 28.6
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.7e-18 97.4 234 28.6
TAR626G1098 Trochodendron aralioides HOM05D001154 ORTHO05D010892 3.7e-18 97.4 67 68.7
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.4e-17 94.7 233 29.6
PRCOL_00005542 Prasinoderma coloniale HOM05D007837 ORTHO05D009965 2.0e-16 91.7 332 27.4
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.0e-15 89.4 240 28.8
SMO263G0007 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 2.5e-14 84.7 212 29.7
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 4.7e-13 80.5 303 25.1
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 8.0e-13 79.7 263 27.0
Cpa.g.sc192.14 Carica papaya HOM05D007837 ORTHO05D009965 2.3e-12 78.2 58 63.8
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 4.0e-12 77.4 229 27.1
Mapoly0020s0028 Marchantia polymorpha HOM05D007670 ORTHO05D009646 2.6e-11 74.7 207 27.5
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 3.3e-11 74.3 265 26.8
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 5.7e-11 73.6 234 25.6
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 1.7e-10 72.0 256 26.2
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 1.7e-10 72.0 260 26.5
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 3.7e-10 70.9 264 24.2
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 3.7e-10 70.9 287 23.7
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 3.7e-10 70.9 240 25.0
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 3.7e-10 70.9 302 24.8
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 3.7e-10 70.9 399 25.1
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 4.8e-10 70.5 219 26.9
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 6.3e-10 70.1 252 25.8
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 6.3e-10 70.1 229 27.5
TAR371G0483 Trochodendron aralioides HOM05D001154 ORTHO05D010892 6.3e-10 70.1 42 71.4
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.4e-09 68.9 233 26.2
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 3.1e-09 67.8 269 25.3
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 5.3e-09 67.0 261 24.1
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 7.0e-09 66.6 274 24.5
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 9.1e-09 66.2 271 23.2
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 9.1e-09 66.2 280 25.0
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 9.1e-09 66.2 264 25.0
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 9.1e-09 66.2 264 25.8
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 9.1e-09 66.2 234 24.8
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 9.1e-09 66.2 234 26.5
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 1.6e-08 65.5 235 26.8
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 1.6e-08 65.5 165 26.7
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 1.6e-08 65.5 291 24.1
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 2.0e-08 65.1 261 23.0
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 4.5e-08 63.9 153 28.8
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 4.5e-08 63.9 249 24.1
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 4.5e-08 63.9 215 24.2
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 5.9e-08 63.5 218 24.3
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 5.9e-08 63.5 204 27.5
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 5.9e-08 63.5 212 25.0
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 5.9e-08 63.5 265 24.2
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 7.7e-08 63.2 268 23.5
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 7.7e-08 63.2 214 24.8
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 1.0e-07 62.8 225 24.0
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.0e-07 62.8 275 23.6
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 1.0e-07 62.8 206 24.3
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.7e-07 62.0 264 23.9
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 1.7e-07 62.0 241 24.9
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 1.7e-07 62.0 222 24.8
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 3.8e-07 60.8 264 23.9
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 3.8e-07 60.8 264 23.9
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 5.0e-07 60.5 244 22.5
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 5.0e-07 60.5 294 23.5
SEGI_26529 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 6.5e-07 60.1 82 39.0
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 8.5e-07 59.7 230 23.9
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.5e-06 58.9 264 23.5
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 1.5e-06 58.9 238 23.1
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 1.5e-06 58.9 207 26.1
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 1.5e-06 58.9 235 26.0
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 2.5e-06 58.2 260 23.1
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 3.2e-06 57.8 215 24.7
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 4.2e-06 57.4 287 23.7
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 5.5e-06 57.0 211 25.1
RcHm_v2.0_Chr7g0192411 Rosa chinensis HOM05D007670 ORTHO05D009646 9.4e-06 56.2 188 27.1


User provided reference genes

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